mRNA_Ecto-sp6_S_contig82.17413.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: D8LEK4_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK4_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 8.070e-135 Identity = 204/207 (98.55%), Postives = 205/207 (99.03%), Query Frame = 2
Query: 23 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTRRVWADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGVDAVQKDAFVQEANWLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDNAAADDVCSIS 643
MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTR WADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGVDAVQK+AFVQEANWLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDNAAADDVCSIS
Sbjct: 1 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTR--WADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGVDAVQKEAFVQEANWLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDNAAADDVCSIS 205
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: W7TYU3_9STRA (Chaperone protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYU3_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.020e-22 Identity = 68/209 (32.54%), Postives = 117/209 (55.98%), Query Frame = 2
Query: 23 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTRRVWADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGV-DAVQKDAFVQEAN-WLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDNAAADDVCSIS 643
M+DYY IL+V+R+AT EIK AY+ AL +HPDV ++ FK +EAY++L+D + R+ YD LG+ +V++ + + + +PPP KI + EW AWHYG + V K+ FV+ N ++D+ + A F ++K ++ + + +K + ++ ++ER++ RR R+ +R ED+A+A C I+
Sbjct: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVST-----FYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKETQSVIDQSYKRGKA-EKDLIVERMKARRAARMA---NRGYNEDSASAGGSCVIA 200
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A843SWU7_9BACT (Chaperone protein DnaJ n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A843SWU7_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 5.470e-16 Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 2
Query: 26 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSS 253
RDYY +L VARTAT +E+K+AYR++A+ HPD N GDK +ED+FK+A+EAY VLAD E+R +YDR G + V+S++
Sbjct: 4 RDYYDVLGVARTATEAELKSAYRKLAMKCHPDRNPGDKAAEDQFKEAAEAYGVLADPEKRDLYDR-FGHKAVSSAA 78
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A317IBK5_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A317IBK5_9BACT) HSP 1 Score: 84.0 bits (206), Expect = 5.570e-16 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 2
Query: 26 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDR 220
RDYY +L ++RTAT+ EIK+AYR++A+ HPD N D +E++FK+A+EAY VL D EQRR YDR
Sbjct: 4 RDYYEVLGISRTATDQEIKSAYRRLAVRYHPDKNPNDASAEEKFKEAAEAYGVLCDAEQRRRYDR 68
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A7X4F7H7_9BACT (J domain-containing protein n=2 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X4F7H7_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 5.990e-16 Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 2
Query: 23 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYD 217
MRDYY IL V R AT EIK AYR++A+ HPD N GDKG+E++FK+AS AYSVL+D E+RR+YD
Sbjct: 1 MRDYYEILGVDRRATPEEIKKAYRKLAVQYHPDKNPGDKGAEEKFKEASNAYSVLSDPEKRRVYD 65
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A7Y4WET3_9BACT (Chaperone protein DnaJ n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4WET3_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-15 Identity = 40/65 (61.54%), Postives = 55/65 (84.62%), Query Frame = 2
Query: 26 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDR 220
RDYY +L ++RTAT+ EIK++YR++AL HPD N G K +ED+FK+A+EAYSVLAD ++RR+YDR
Sbjct: 4 RDYYEVLAISRTATDQEIKSSYRKLALQYHPDRNPGSKDAEDKFKEAAEAYSVLADQDKRRMYDR 68
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A382S6A7_9ZZZZ (J domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382S6A7_9ZZZZ) HSP 1 Score: 82.8 bits (203), Expect = 1.320e-15 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 2
Query: 29 DYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYD 217
DYY +L V R A SE+K AYRQ AL HPD N GDK +ED+FK+ASEAY VL D+E+R+IYD
Sbjct: 5 DYYEVLGVPRNANESELKKAYRQQALKYHPDKNPGDKQAEDKFKEASEAYDVLKDSEKRQIYD 67
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A2V8C2C1_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8C2C1_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 1.910e-15 Identity = 39/65 (60.00%), Postives = 53/65 (81.54%), Query Frame = 2
Query: 26 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDR 220
RDYY IL + R+AT+ EIK+AYR++A+ HPD N GDK +ED FK+A+EAY++LAD E+R +YDR
Sbjct: 4 RDYYEILGIQRSATDIEIKSAYRKLAMKYHPDRNPGDKAAEDRFKEAAEAYAILADAEKRTLYDR 68
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: UPI001ACC4E57 (Chaperone protein DnaJ n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001ACC4E57) HSP 1 Score: 88.2 bits (217), Expect = 2.120e-15 Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 2
Query: 26 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDR 220
RDYY +L V+RTAT+ EIK A+R++A HPD N GD+ SED+FK+ASEAY VL+D+E+R++YDR
Sbjct: 5 RDYYEVLGVSRTATDDEIKRAFRKLAKQYHPDANPGDQASEDKFKEASEAYQVLSDSEKRQLYDR 69
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Match: A0A2V8HSB4_9BACT (Chaperone protein DnaJ n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8HSB4_9BACT) HSP 1 Score: 87.8 bits (216), Expect = 2.370e-15 Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 2
Query: 26 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDR 220
RDYY +L V RT+T EIK+AYR++AL HPD N GDK +E++FK+A+EAY+VLADT++R +YDR
Sbjct: 5 RDYYEVLGVTRTSTEVEIKSAYRKLALKYHPDRNPGDKAAEEKFKEAAEAYAVLADTDKRHMYDR 69 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17413.1 >prot_Ecto-sp6_S_contig82.17413.1 ID=prot_Ecto-sp6_S_contig82.17413.1|Name=mRNA_Ecto-sp6_S_contig82.17413.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=208bp MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEback to top mRNA from alignment at Ecto-sp6_S_contig82:132502..137579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17413.1 ID=mRNA_Ecto-sp6_S_contig82.17413.1|Name=mRNA_Ecto-sp6_S_contig82.17413.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5078bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:132502..137579+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:132502..137579+ >mRNA_Ecto-sp6_S_contig82.17413.1 ID=mRNA_Ecto-sp6_S_contig82.17413.1|Name=mRNA_Ecto-sp6_S_contig82.17413.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:132502..137579+ (Ectocarpus species6 EcLAC_371)back to top |