mRNA_Ecto-sp6_S_contig8.17199.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: D7G3J3_ECTSI (Conserved C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J3_ECTSI) HSP 1 Score: 691 bits (1783), Expect = 3.110e-238 Identity = 439/475 (92.42%), Postives = 440/475 (92.63%), Query Frame = 1
Query: 1 MPSTLTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXX-----PMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXX-------ENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVALQRGERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNKTFDRISDM 1389
MPSTLTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX VLQKSG GTR XXXXXXXXXXXXXXXX P XXXXXXXXXXX PMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANAS AGD XXXXXXXX ENSGEESDGE+VEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVALQRGERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNKTFDRISDM
Sbjct: 1 MPSTLTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXSPTDGXXXXXXXXXXXXXXXXXXXXXXVLQKSGNGTRXXXXXXXXXXXXXXXXXXXXXGSPQKDAMSQXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASGAGDAXXXXXXXXXXXXXXXENSGEESDGESVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVALQRGERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNKTFDRISDM 475
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A485KZK5_9STRA (Aste57867_13885 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZK5_9STRA) HSP 1 Score: 230 bits (587), Expect = 2.300e-63 Identity = 165/456 (36.18%), Postives = 224/456 (49.12%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGF-----DRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVALQRGERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNK 1365
LTCTAC F T E K H+KLDWHRYNL+RKV GL PV F D AAA + +C C KSF + + H +KKH+ AVK+A + +K AXXXXXXXX C+FC F + S E N HM +HHGFFIPD+EYLQD EG + Y+ EKVKLG ICLYCNGKGK F +Y+ Q+HM D +HCKLLY+E EDLHEYE FYDF+ASY G++ A+ +AA E ++ + + + +T+ ++ G LVL DG+ +G R++ RYYKQR R + R+ V+AQ + L M +MS S +++ + G ++ ++ + +R H+ + RERL+T R +KL K
Sbjct: 2 LTCTACREEFETYELQKEHFKLDWHRYNLKRKVVGLPPVSVEQFNVRKADGASAAAAAQPEEVVEQSFKCHNCNKSFTNAKAVENHKVTKKHQAAVKKADGVENITSK----------------------------VIEKKEEVAAEDAXXXXXXXXEEDVSLEITH----------------------------CMFCAFEADSLESNLTHMQKHHGFFIPDLEYLQDLEGFITYLVEKVKLGHICLYCNGKGKVFRSYKDCQKHMNDLSHCKLLYEEYEDLHEYEEFYDFTASY------GIVPASGAAADGEEWEDVEEVEVGSDDEEEDELAGIKTISFSETGALVLPDGRQLGQREYRRYYKQRHRPDEARESVLAQTKERLLLAYQMAGVDMSTELSVS---YVKKFLSRRTGNIAEAKTIQEKRSVR-HKFQKHRERLET--RSHKLQK 389
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A024UL04_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UL04_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.260e-61 Identity = 163/463 (35.21%), Postives = 208/463 (44.92%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGF-----DRLLAAALGPDAPKADFQA-RCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAA--GDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVALQRGERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNKTFDR 1377
LTCTAC F+T E K H+KLDWHRYNL+RKV GL PV F D A P Q+ +C C KSF S + H +KKH AVK+ + + C+FC + S E N HM + HGFFIPD+EYLQD +G + Y+ EKVKLG ICLYCNGKGK F TY+ Q+HMID +HCKL Y+ED+DLHEYE FYDF+ASY GL+A+ AA D E +E D E +V +T+ ++D G LVL DG+ +G R++ RYYKQR R D R+ V+AQ + L M +MS S + SK V+ H+ + RERL T R +KL K +R
Sbjct: 2 LTCTACREEFATYELQKEHFKLDWHRYNLKRKVVGLPPVTVEQFVARKADGTSALTTAPKVGDPVLQSFKCHNCNKSFTSVKAVENHKATKKHLAAVKKNDNVENITSKVIEQHVETADPPAADGDASTEDNEDEQDPDVN--------------------------------------------------LNILHCMFCTNEADSLEANLTHMQKTHGFFIPDLEYLQDLDGFITYLVEKVKLGHICLYCNGKGKAFRTYKDCQKHMIDLSHCKLRYEEDDDLHEYEEFYDFTASY------GLVASGKMAATPDDGSTEWEDVEEVGSDEEDDELADV-QTISISDTGNLVLPDGRQLGQREYRRYYKQRHRPDDARESVLAQTKERLLLCYQMAGIDMSTALSVSYVNKFLSRRTGNIAEARSIQESKSVR----HKFQKHRERLDT--RSHKLQKNPNR 401
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A835YRS1_9STRA (C2H2 type zinc-finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS1_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.600e-60 Identity = 214/511 (41.88%), Postives = 262/511 (51.27%), Query Frame = 1
Query: 16 TCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKR-----------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNR------YYKQRL----------------------RTPDERDVVVA---------QRRAARLRLGAM------YDA--EMSKGTSTGGAVALQRGERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNKTFDRI 1380
TCTACA F +SE +AHYKLDWHRYNL+RKVA LAPV + F+R LAA G K+D++ C ECRKSF SE LY QHL++KKH++ V A XXXXXXXXXX XXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXX P+G +C+FC+ + +NCAHML HGFFIPD EYL D GLVAY EKVKLG +CL CNG+G+ F +RAVQQHM D HC+L Y+E EDLHE+E FYDF SY + + GE D V + + VT LGEL LLDG+ VG+R+++R Y+ QR+ R V+ A + R R GA DA + G GG + RG G + +++ +R Q RE LK I+QNKLN+TF R+
Sbjct: 103 TCTACASTFQSSEEQRAHYKLDWHRYNLKRKVASLAPVSKEDFERRLAAIAGAAVTKSDYRGHCKECRKSFGSEKLYAQHLETKKHQQVVAANAKKAITAASPAAAAGGSEGPILQDTLEADMPAPEVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEPPLGAHICVFCNKEARDVADNCAHMLAAHGFFIPDAEYLVDRAGLVAYCGEKVKLGRLCLVCNGRGRGFRGWRAVQQHMADVGHCRLCYEEGEDLHEFEPFYDFRPSYGEGDVM----------------------EDGEGGDAGLAGVPQ-IEVTHLGELQLLDGRVVGHRQYDRIWRLIEYHAQRVNQGRSCVSPQVQHGINVLAPPWRALSSSQVLQAGSAESRHAREHRGRAPRAGAAAXXXXXXDARGQSGFGAQGGGGALMARGGAXXXX-XXGFAGPREMHQVRRAQWLAQREALKLGIKQNKLNRTFTRV 589
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: W4FH63_9STRA (C2H2-type domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FH63_9STRA) HSP 1 Score: 214 bits (546), Expect = 8.890e-58 Identity = 137/388 (35.31%), Postives = 178/388 (45.88%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLAAALGPDAPKADFQA-RCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVA----------RTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQ 1143
LTCTAC F+T E K H+KLDWHRYNL+RKV GL PV F A + QA +C C KSF + H +KKH+ AVK+A +Q C+FC F + S E N HM + HGFFIPD+EYL+D EG V Y+ EKVKLG +CLYCNGKGK F T++ Q+HMID +HCKL Y+E DLHE++ FYDF+ASY G++AA ++A G++ + E VE T+ ++D G +VL DG+ +G R+ RYYKQR R + RD V+AQ
Sbjct: 2 LTCTACREEFATYELQKEHFKLDWHRYNLKRKVVGLPPVSVEQFFARKADGAPQKVEEPVLQAFKCHNCNKSFSNVKAVDNHKATKKHQVAVKKADNVETITSKVIAKAVEDAPVDEEAATTEDDDEGEDVDLNIQH------------------------------------------------------CMFCSFEADSLETNLTHMQKSHGFFIPDLEYLEDLEGFVTYLVEKVKLGHVCLYCNGKGKAFRTFQDCQKHMIDLSHCKLAYEEGVDLHEFDDFYDFTASY-----DGVVAAKQTSA-----------TAHGDDDEWEDVEXXXXXXDELAGLETISISDTGNMVLPDGRQIGQRELRRYYKQRHRPEEARDSVLAQ 319
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: T0QLY7_SAPDV (C2H2-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QLY7_SAPDV) HSP 1 Score: 203 bits (517), Expect = 6.350e-54 Identity = 142/382 (37.17%), Postives = 179/382 (46.86%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGF-----DRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQ 1143
LTCTAC F T E K H+KLDWHRYNL+RKV GL V + F D A A P P D +C C KSF + H +KKH AVK+ VL+ ++ P C+FC S S E N HM + HGFF+PD+EYL+D EGL+ Y+ EKVKLG CLYCN KGK F TY+ Q+HMIDR+HCKL+Y+ED DL+EYE FYDF++SY + XXXXXXXXXE + +T+ +++ GELVL G +G R+ RYYKQR R + R+ V+AQ
Sbjct: 2 LTCTACREEFPTYELQKEHFKLDWHRYNLKRKVVGLPAVTEAQFQARKADGASALAAAPKEPPVDMSYKCHNCGKSFTNTKALDNHKATKKHMAAVKK------------------------------DGEEKITSKVLEP------------------------VKDDEPVAEDEEEDPDANISLKLED-----CMFCTQSSESLEANLIHMQKMHGFFVPDLEYLKDLEGLMTYLVEKVKLGHYCLYCNTKGKVFRTYQDAQKHMIDRSHCKLIYEEDNDLYEYEEFYDFTSSYGNDXXXXXXXXXXXXXXXXXXXXXXXXE----------LAHIKTISISETGELVLPSGARLGQRELRRYYKQRHRPDEVRESVLAQ 314
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A5D6Y4H9_9STRA (C2H2-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4H9_9STRA) HSP 1 Score: 199 bits (507), Expect = 5.460e-52 Identity = 144/440 (32.73%), Postives = 187/440 (42.50%), Query Frame = 1
Query: 16 TCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGF----DRLLA---AALGPDAPKADFQAR-------------CLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETV----------------EVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVAL 1227
TCTAC + F++ E K H++ DWHRYNL+RKV LAPV + F +LLA A L D R C+ C K+F + Y HL SKKH K+ A+ T G + P CIFC + F+ N +HML+ HGFFIPDVE+L D EGLV Y+ EKVKLG CLYCNGKGK+F Y VQ+HM +HCKL YDEDED+ E FYDFSA Y ++ L A A E E S G+ E T+ V++ GELVL +G+ +G R++ RYY+QR R + R+ V+A + L M + G ST ++A
Sbjct: 3 TCTACRLEFASFEMQKEHFRSDWHRYNLKRKVVELAPVSEEQFAFRMQKLLADKQAVLASDPKHKQAVKREEMKKTGVKTLTKCVACNKTFTTANAYDNHLVSKKHLANAKKLPQAVDAVATIQKQLDVV--------------------AIGGAEVAATEGERATPLTDEEVAVSLEEFKQQVPLAKED-------------------CIFCTHHAEDFDANLSHMLKEHGFFIPDVEFLTDAEGLVGYLAEKVKLGNFCLYCNGKGKSFRDYHDVQKHMTALSHCKLPYDEDEDIEELIDFYDFSAQYKSSKVKALTAGGEEDA---------EWETDSEASVGDDXXXXXXXXXXXXXXXXXEALHTINVSETGELVLANGRRLGRREFRRYYRQRFRPQEARESVLAVTKERLLLAYQMAGVDPGAGGSTALSLAF 394
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A1V9Z005_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z005_9STRA) HSP 1 Score: 197 bits (502), Expect = 6.780e-52 Identity = 166/464 (35.78%), Postives = 219/464 (47.20%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLA------AALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQRRAARLRLGAMYDAEMSKGTSTGGAVALQR---GERKAFGGLSGVSRSKDVKMLRAHQRSQARERLKTEIRQNKLNKTFDR 1377
LTCTAC F++ E K H+KLDWHRYNL+RKV GL PV F A AA+ + P AD +C C KSF + + H +KKH AVK+A XXXXXXXXX C+FC S + E N HM + HGFF+PD+EYL D EGL+ Y+ EKVKLG CLYCN KGK F TY+ Q+HMIDR+HCKL+Y+ED DL+EYE FYDFS SY E+ XXXXXXXXX + +T+ +++ GE+VL +G +G R+ RYY+QR R + R+ V+AQ + RL Y +G ++ ++ R+ + SK V+ H+ + RERL+T R +KL K +R
Sbjct: 2 LTCTACREEFASYEDQKEHFKLDWHRYNLKRKVVGLPPVTLAQFHARKADGAAAMAAVQKEVP-ADVSYKCHNCSKSFTNVKALENHKATKKHIAAVKKAGAENITSKKLEAKEXXXXXXXXXAEEDPDAYISLALED----------------------------------------------------------CMFCSHSSDNLENNLIHMQKIHGFFVPDLEYLTDLEGLIKYLIEKVKLGHYCLYCNTKGKVFRTYQDAQKHMIDRSHCKLIYEEDNDLYEYEEFYDFSTSYGKNEEEWEDVEEXXXXXXXXXXXXXXXX----------LAKIKTISISETGEMVLPNGARLGQRELRRYYRQRHRPEETRESVLAQTKE---RLLLAYQLAGMEGNTSAITISFANKFLNRRQGNIMARSIQESKSVR----HKFQKHRERLET--RSHKLQKNPNR 387
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A1V9YR35_9STRA (C2H2-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR35_9STRA) HSP 1 Score: 195 bits (495), Expect = 5.740e-51 Identity = 138/382 (36.13%), Postives = 176/382 (46.07%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGF-----DRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQ 1143
LTCTAC F+T E K H+KLDWHRYNL+RKV GL PV F + A A P +CL C KSF + AVK+ VL+ A L+ C+FC S + E N HM + HGFF+PD+EYLQD EG + Y+ EKVKLG CLYCNGKGK F TY+ Q+HMIDR+HCKL+Y+ED DL+EYE FYDF++SY + XXXXXXXXXE + +T+ +++ GE+VL +G +G R++ RYYKQR R D R+ V+AQ
Sbjct: 2 LTCTACREEFATYELQKEHFKLDWHRYNLKRKVVGLPPVTLLQFQARKSEGASALAAVPQEAPVPMSFKCLNCSKSFTNTKAXXXXXXXXXXXSAVKK------------------------------DGEEKITSKVLETK----NDAEVEEAEEEEDPDANISLKIED-------------------------CMFCPHASETLEANLIHMQKTHGFFVPDLEYLQDLEGFITYLVEKVKLGHYCLYCNGKGKVFRTYQDAQKHMIDRSHCKLIYEEDNDLYEYEEFYDFTSSYEQPDGQEWEDVEEIEVXXXXXXXXXXXE----------LAHIKTISISETGEMVLPNGTRLGQREYRRYYKQRHRPDDVRECVLAQ 314
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Match: A0A6G0WJD2_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJD2_9STRA) HSP 1 Score: 195 bits (495), Expect = 6.350e-51 Identity = 152/384 (39.58%), Postives = 191/384 (49.74%), Query Frame = 1
Query: 13 LTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDR-------LLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQKSGCGTRGAXXXXXXXXXXXXXXXXLRGXXPXXXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQHMIDRAHCKLLYDEDEDLHEYESFYDFSASYLDAEKSGLLAANASAAGDXXXXXXXXXENSGEESDGETVEVARTLGVTDLGELVLLDGKTVGNRKWNRYYKQRLRTPDERDVVVAQ 1143
LTCTAC F++ E K H+KLDWHRYNL+RKV GL PV F+ L A P F +C C KSF + + AVK+A VL+ XXXXXXXXXXXXXX ++ C+FC + S E N HM + HGFFIPD+EYLQD EGL+ Y+ EKVKLG ICLYCNGKGK F +Y+ Q+HMID +HCKL Y+EDEDLHE+E FYDF+ASY XXXXXXXX E +G +T+ +++ G +VL DG+ +G R++ RYYKQR R + R+ V+AQ
Sbjct: 2 LTCTACREEFASYEQQKEHFKLDWHRYNLKRKVVGLPPVSVEQFNSRKAEGASALTATAKPQEENQTF--KCHNCNKSFTNSKAVEXXXXXXXXXAAVKKANNVENITSK-----------------------------VLEXXXXXXXXXXXXXXXXXXXXXXXLDIQH---------------------------CMFCSHEADSLESNLTHMQKFHGFFIPDLEYLQDMEGLITYLVEKVKLGHICLYCNGKGKVFRSYKDCQKHMIDLSHCKLRYEEDEDLHEFEEFYDFTASYGVDNTEWEDVEXXXXXXXXXXXXXXXDELAG----------IKTITISETGNMVLPDGRQLGQREFRRYYKQRHRPDEARESVLAQ 317 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig8.17199.1 >prot_Ecto-sp6_S_contig8.17199.1 ID=prot_Ecto-sp6_S_contig8.17199.1|Name=mRNA_Ecto-sp6_S_contig8.17199.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=464bp MPSTLTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRback to top mRNA from alignment at Ecto-sp6_S_contig8:2732539..2738567- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig8.17199.1 ID=mRNA_Ecto-sp6_S_contig8.17199.1|Name=mRNA_Ecto-sp6_S_contig8.17199.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6029bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:2732539..2738567- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig8:2732539..2738567- >mRNA_Ecto-sp6_S_contig8.17199.1 ID=mRNA_Ecto-sp6_S_contig8.17199.1|Name=mRNA_Ecto-sp6_S_contig8.17199.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:2732539..2738567- (Ectocarpus species6 EcLAC_371)back to top |