mRNA_Ecto-sp6_S_contig8.17192.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: D7G3I7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I7_ECTSI) HSP 1 Score: 1436 bits (3716), Expect = 0.000e+0 Identity = 995/1089 (91.37%), Postives = 1000/1089 (91.83%), Query Frame = 1
Query: 1 MLQQQLLAASKLDAAQASIQSGEDGVREGVAMLLTAISEYECNQDSGGVNGSQVLGAAMRRLTEDPYLTLGVDPASDEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALNSRLRKHPKGSAAGTPANNAGAASPGGARQPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTSARGEPAAASGDEKVRQFNKRFYEEFRXXXXXXXXXXXXXXXXXXXXXXXSKHQPPSRPKMRSTNRTESTVTLEWHCAGLPSTTAFELQWRQRGRTASEWVTSPTLVVGKSCRKKNLAPCTCYEFRVRAASAWGWSGYCDPVMVVTLPSTGGXXXXXXXXXXXXXXXXXSPPRQKARETTRADGIGGSAAEKAKAQARTKLLGMSFSRHRRSQTQAGHAKPSVQFRSSSIAGTEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRRTMHAQGTPSEGAWVCVVCKRPNEPTSNSCWVCYTTRSYQPVNLDRIRTENETPGRREGSVGGGGNPLGSGRRASIGSRPRSPSTTPTEGNTGKQSPTAGKGGSNTTNNGAAATDDSGVRVSEKVPSIRVYSVPTQPEPAGDGIRVSASDANPSSGAAGNGAAGEEGTKDPADVWEFTEGDLDNVGGGATTYGSDDEWSYASGTGGLDTKSDPGDADRYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATPKRYLNGRITKLHNVRAEPIREANVVGYLIATKEVEVLAEVGDWYKVRWHKRAKEKVRQDPPSSSSSXXXXXXXXTAASESTPAEGEKTKDIDGGGSEGEKRNEEGEGEKPDDASEERKEKGTGWCVTRDKKHQYIVTVGAEETDPDATRRPSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAGGVFGEAADEGECWHELKDEDGSVYYFNATSGMSQWEPPMWLDEIDPTTXXXXXXXXXXXXXXXXRPEEFIPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFHEAMHKAAQTGSAQHLNTVAEGVAGGGRETAENASAA 3267
MLQQQLLAASKLDAAQASIQSGEDGVREGVAMLLTAISEYECNQDSGGVNGSQVLGAAMRRLTEDPYLTLGVDPA+DEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALN RLRKHPKGSAAGTPANNAGAASPGGARQPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTSARGEPAAASGDEKVRQFNKRFYEEFR XXXXXX SKHQPPSRPKMRSTNRTESTVTLEWHCAGLPSTTAFELQWRQRGRTASEWVTSPTLVVGKSCRKKNLAPCTCYEFRVRAASAWGWSGYCDPVMVVTLPSTGG XXXXXXXXX SPPRQK ++DGIGGSAAEKAKAQ + +RHRRSQTQAGHAKPSVQFRSSSIAGTEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RRRTMHAQGTPSEGAWVCVVCKRPNEPTSNSCWVCYTTRSYQPVNLDRIRTENETPGRREGSVGGGGNPLGSGRRASIGSRPRSPSTTPTEGNTGKQSPTAGKGGSNTTNNGAAATDDSGVRVSEKVPSIRVYSVPTQPEPAGDGIRVSASDANPSSGAAGN AAGEEGTKDPADVWEFTEGDLDNVGGGATTYGSDDEWSYASGTGGLDTKSDPGDADRYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATPKRYLNGRITKLHNVRAEPIREA VVGYLIATKEVEVLAEVGDWYKVRWHKRAKEK RQDPPS XXXXXXXX GE EKPDDASEERKEKGTGWCVTRDKKHQYIVTVGAEETDPDATRRPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VFGEAADEGECWHELKDEDGSVYYFNATSGMSQWEPPMWLDEIDPTTXXXXXXXXXXXXXXXXRPEEFIPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFHEAMHKAAQTGSAQHLNTV EGVAGGGRETAENASAA
Sbjct: 1 MLQQQLLAASKLDAAQASIQSGEDGVREGVAMLLTAISEYECNQDSGGVNGSQVLGAAMRRLTEDPYLTLGVDPAADEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALN-RLRKHPKGSAAGTPANNAGAASPGGARQPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSARGEPAAASGDEKVRQFNKRFYEEFRREAQKQDKSKAXXXXXXAAAAGTSKHQPPSRPKMRSTNRTESTVTLEWHCAGLPSTTAFELQWRQRGRTASEWVTSPTLVVGKSCRKKNLAPCTCYEFRVRAASAWGWSGYCDPVMVVTLPSTGGGGAXXXXXXXXXESASTSPPRQKV-SGFQSDGIGGSAAEKAKAQ-------VEEARHRRSQTQAGHAKPSVQFRSSSIAGTEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRTMHAQGTPSEGAWVCVVCKRPNEPTSNSCWVCYTTRSYQPVNLDRIRTENETPGRREGSVGGGGNPLGSGRRASIGSRPRSPSTTPTEGNTGKQSPTAGKGGSNTTNNGAAATDDSGVRVSEKVPSIRVYSVPTQPEPAGDGIRVSASDANPSSGAAGNAAAGEEGTKDPADVWEFTEGDLDNVGGGATTYGSDDEWSYASGTGGLDTKSDPGDADRYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPKRYLNGRITKLHNVRAEPIREAKVVGYLIATKEVEVLAEVGDWYKVRWHKRAKEKARQDPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GEAEKPDDASEERKEKGTGWCVTRDKKHQYIVTVGAEETDPDATRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGEAADEGECWHELKDEDGSVYYFNATSGMSQWEPPMWLDEIDPTTXXXXXXXXXXXXXXXXRPEEFIPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFHEAMHKAAQTGSAQHLNTVTEGVAGGGRETAENASAA 1074
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A7S4EDW7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDW7_9STRA) HSP 1 Score: 132 bits (331), Expect = 7.040e-28 Identity = 106/341 (31.09%), Postives = 144/341 (42.23%), Query Frame = 1
Query: 145 VNGSQVLGAAMRRLTEDPYLTLGVDPASDEGTIKKAYRKLALRYHPDKNK-ATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALNSRLRKHPKGSAAGTPANNAGAASPGGARQPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTSARGEPAAASGDEKVRQFNKRFYEEFRXXXXXXXXXXXXXXXXXXXXXXX-----SKHQ----------------PPSRPKMRSTNRTESTVTLEWHCA---GLPSTTAFELQWRQRGRTASEWVTSPTLVVGKSCRKKNLAPCTCYEFRVRAASAWGWSGYCDPVMVVTLPSTG 1092
VNG+ VL +++L EDPY LGV D +KKAYRKLAL+YHPDKN T+ LF +Q A+ +L + KR YD++R R+ EA N +LRK G+ S G R P+ T++ P ++ R FN++FY E++ S H P +R N+T+STVTLEW G + A+ELQWR+R W ++ L++ +CRK+NL T YEFRVRAAS GWS + D V TL G
Sbjct: 48 VNGAPVLNRILKKLQEDPYRCLGVAKTCDSSEVKKAYRKLALQYHPDKNADRTTALFTEIQRAYTLLSDDKKRKSYDLRRARK-EAQNEKLRKRXXXX---XXXXREGSPSMGMRRPPS----------------------------------------------TNSFHMPPQTEEEKTQRDFNRKFYSEYKQHMKPAPSTGAGTSRPPPPSGAPPSEGVSAHARGSAGASTSKNGAXXXXPKPTHLRVANKTDSTVTLEWRAGELRGAAVSKAYELQWRKRQGKDQGWQSASQLILHTTCRKRNLDKQTRYEFRVRAASVAGWSPHSDVCDVTTLNGPG 338
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A7S1TP40_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP40_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.480e-22 Identity = 98/296 (33.11%), Postives = 137/296 (46.28%), Query Frame = 1
Query: 2281 YLNGRITKLHNVRAEPIREANVVGYLIATKEVEVLAEVGDWYKVRWHKRAKEKVRQDPPSSSSSXXXXXXXXTAASESTPAEGEKTKDIDGGGSEGEKRNEEGEGEKPDDASEERKEKGTGWCVTRDKK----HQYIVTVGAEETDPDATRRPSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAGGVFGEAADEGECWHELKDEDGSVYYFNATSGMSQWEPPMWLDEIDPTTXXXXXXXXXXXXXXXXRPEEFIPIVRENPYATTPEQDFIKSVLSPKRSKGPKSF 3156
+LN +TKLHNVRAEP++ + VVG+L+ ++V AEVGDW KV+WH++ ++ EK+ D+ G GWC+ R+ + +Y++ V P+ R + EG +++ W+EL+D G +YYFN+++G+SQW+PP W DE D XXXXXXXXXXXXXXXX E FIP+VRE Y+T P DFIK VLSPKRS ++F
Sbjct: 491 WLNAEVTKLHNVRAEPMKNSPVVGHLLTARQVIATAEVGDWVKVKWHRKYSQE------------------------------EKSIDV--------------------------VTAGQGWCLRRNSEVAAGPEYLIEV------PEVDARKMAQTASARRMRDPNVLPKVREEKGDEDEDGTATDGDNEGP-------SEDQAVWYELRDSTGELYYFNSSTGISQWDPPPWFDETDXXXXXXXXXXXXXXXXXXXXXEGFIPVVREEVYST-PGADFIKDVLSPKRSFASRTF 716
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A7S2CLZ4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLZ4_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.320e-18 Identity = 59/96 (61.46%), Postives = 77/96 (80.21%), Query Frame = 1
Query: 2872 DEGECWHELKDEDGSVYYFNATSGMSQWEPPMWLDEIDPTTXXXXXXXXXXXXXXXXRPEEFIPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFH 3159
DE + +EL+DE G +YYFN+ +G+S W PP W+D +DP +XXXXXXXXXXXXXXX P +FIP+VRE Y+T PE F+KSVLSPKRS+GP++F+
Sbjct: 40 DEEDLIYELRDEAGDLYYFNSGTGVSDWNPPEWIDSVDPQSXXXXXXXXXXXXXXXEVPFDFIPVVREEAYST-PEAQFVKSVLSPKRSRGPRNFY 134
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A7S1G6Z7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6Z7_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.450e-12 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 163 LGAAMRRLTEDPYLTLGVDPASDEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYD 372
L A+ L DPY LGVD A+ +KKAYR+LALRYHPDKN T +LF+ V A+ ++ +P KR D
Sbjct: 65 LERALTALASDPYACLGVDSAATPNVVKKAYRRLALRYHPDKNHHTESLFKTVSAAYALVSDPVKRRALD 134
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: F0YFB5_AURAN (J domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFB5_AURAN) HSP 1 Score: 70.1 bits (170), Expect = 2.620e-11 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 193 DPYLTLGVDPASDEGTIKKAYRKLALRYHPDKN-KATSTLFQAVQGAHDILIEPNKRAEYDV 375
DPY LG++ D G IKKAYRKLALR+HPDKN T+ LF AVQ A+ +L + +KR YD+
Sbjct: 1 DPYRCLGLERGCDGGAIKKAYRKLALRHHPDKNANKTTVLFAAVQAAYVLLSDESKRKGYDL 62
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A7V9WKE0_9ACTN (J domain-containing protein (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9WKE0_9ACTN) HSP 1 Score: 72.0 bits (175), Expect = 4.530e-11 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 184 LTEDPYLTLGVDPASDEGTIKKAYRKLALRYHPDKNKATSTL---FQAVQGAHDILIEPNKRAEYD 372
+T++PY LGVD + + IKKAYRKLA +YHPDKN ++ F+A+Q AH IL +P KR EYD
Sbjct: 3 VTKNPYDALGVDKKASDEEIKKAYRKLARQYHPDKNPGDASAEERFKAIQEAHSILSDPKKRREYD 68
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A7S4DIU6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU6_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 4.960e-11 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 226 SDEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALNSR 411
+D +IKKAYRKLAL+YHPDKN +T LFQ VQGA+D+L + +K+ YD +++ QQ+ + R
Sbjct: 7 ADNASIKKAYRKLALKYHPDKNPSTPLLFQEVQGAYDLLSDEDKKERYDERKRAQQQVMGRR 68
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A6H5KSP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSP4_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 5.280e-11 Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = -1
Query: 157 MISERQLPICLFDCPLIRGGVYAESQVWILR*PAHRCSQYL 279
MIS+RQLP+ LFDCP I GVYAESQVWILR PAHRCSQ L
Sbjct: 1 MISKRQLPVRLFDCPFICSGVYAESQVWILRKPAHRCSQDL 41
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Match: A0A4P9ZN18_9FUNG (DnaJ domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZN18_9FUNG) HSP 1 Score: 69.3 bits (168), Expect = 5.310e-11 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 199 YLTLGVDPASDEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYD 372
Y TL VDP + IK+AYR+LALRYHPDKN +F+A+ A+D+L +P KR YD
Sbjct: 2 YQTLNVDPDASPEEIKRAYRRLALRYHPDKNPEAEDMFRAITAAYDVLSDPYKRQVYD 59 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig8.17192.1 >prot_Ecto-sp6_S_contig8.17192.1 ID=prot_Ecto-sp6_S_contig8.17192.1|Name=mRNA_Ecto-sp6_S_contig8.17192.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1090bp MLQQQLLAASKLDAAQASIQSGEDGVREGVAMLLTAISEYECNQDSGGVNback to top mRNA from alignment at Ecto-sp6_S_contig8:2650778..2668233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig8.17192.1 ID=mRNA_Ecto-sp6_S_contig8.17192.1|Name=mRNA_Ecto-sp6_S_contig8.17192.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=17456bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:2650778..2668233- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig8:2650778..2668233- >mRNA_Ecto-sp6_S_contig8.17192.1 ID=mRNA_Ecto-sp6_S_contig8.17192.1|Name=mRNA_Ecto-sp6_S_contig8.17192.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3270bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:2650778..2668233- (Ectocarpus species6 EcLAC_371)back to top |