mRNA_Ecto-sp6_S_contig8.17181.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig8.17181.1
Unique NamemRNA_Ecto-sp6_S_contig8.17181.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A6H5KTA9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTA9_9PHAE)

HSP 1 Score: 834 bits (2154), Expect = 2.240e-295
Identity = 461/475 (97.05%), Postives = 464/475 (97.68%), Query Frame = 1 
Query:   40 MIHQGVTATMRSARAATVSSRXXXXXXXXXXXXXXXXXXXXXXXXXS-----RKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYDS 1449
            M+H+GVTATMRSARAATVSSRXXXXXXXXXXXXXXXXXXXXXXXXX      RKPVFVDGARIPFVLSGT YKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTV+QACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGL  VLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTL DIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVP EKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYDS
Sbjct:    1 MVHKGVTATMRSARAATVSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPVFVDGARIPFVLSGTTYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVTQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLASVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLNDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPMEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYDS 475
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A835ZCM0_9STRA (Acetyl-CoA acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM0_9STRA)

HSP 1 Score: 675 bits (1741), Expect = 2.600e-233
Identity = 338/424 (79.72%), Postives = 374/424 (88.21%), Query Frame = 1 
Query:  178 SRKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYDS 1449
            SRKPVFVDGARIPF +S T YKDL+AVDLGKLAL GLL+RNPEL P ++DY+L+GTVIQESRTSNIAREA M A IP +VP+HT+SQACISANQAMC G EKILAG A+VV+AGG ETFSDLPIRFSR IR RL+   KA KKG  G+LGLLKGL  KD+APETPAIANYTTGEVMGHSSDRL+GRFGISR+EQD FA RSH NAA+AH DG+Y +EIIP +G+T+ENG+K +ST EKL  LKPAFVKPHGTHTAANSSFLSDGASAALIMSE +A EMGL PRS FKSWAFVA+DPFEDLLLGPAFG A+VLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAM+S  F ++SMGRS KLG VP EKLN  GGSLSLGHPFGATG RLV TATNRLHREGGR+ALVAACADGG+GHA ++ERYD+
Sbjct:   26 SRKPVFVDGARIPFAMSSTLYKDLMAVDLGKLALAGLLHRNPELKPAEIDYVLYGTVIQESRTSNIAREAAMAASIPANVPAHTISQACISANQAMCGGVEKILAGRAEVVVAGGCETFSDLPIRFSRGIRQRLIAFPKASKKGPMGILGLLKGLGTKDLAPETPAIANYTTGEVMGHSSDRLAGRFGISREEQDAFAARSHVNAARAHKDGLYKEEIIPFNGTTEENGIKADSTPEKLAKLKPAFVKPHGTHTAANSSFLSDGASAALIMSEAKAKEMGLTPRSFFKSWAFVAVDPFEDLLLGPAFGIARVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMDSDKFCKESMGRSGKLGAVPMEKLNTLGGSLSLGHPFGATGTRLVTTATNRLHREGGRFALVAACADGGIGHAAVIERYDA 449
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S2UU92_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU92_9STRA)

HSP 1 Score: 643 bits (1658), Expect = 5.790e-221
Identity = 322/425 (75.76%), Postives = 370/425 (87.06%), Query Frame = 1 
Query:  178 SRKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSM-GRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYDS 1449
            S K VF+DG RIPF LSGTAYKDLLAVDLG+LA++GL+++ P L P  +DYL++GTVIQE RTSNIARE+ MGAG+P ++PSHT+SQACISAN A C GAEKILAG A +V+AGGVETFSDLPIR S+PIR RLL LGKA KKG  G LGLLKGLKLKD+APETPAIANYTTGEVMG SSDRL+  FGISR++QD FALRSHQ AA+AHA GIY+ EI+ VDGST+ENG+K +STLE LG LKPAFVKPHGTHTAANSSFLSDGASA LI SE RAL +GL P+++ +++ FVA+DPFE+LLLGPA+ +AKVL DAGLTL DIDVFEIHEAFAGQVL+NLAAMNS  FA   + GR++KLGEVP EKLNIHGGSLSLGHPFGATG RL+ TA+NRLHREG R+ALVAACADGGLGHACI+ERYD+
Sbjct:   14 STKVVFIDGCRIPFTLSGTAYKDLLAVDLGRLAMKGLMDKMPSLSPSSIDYLIYGTVIQECRTSNIARESAMGAGLPEALPSHTLSQACISANLAFCTGAEKILAGKAGLVMAGGVETFSDLPIRLSKPIRQRLLGLGKAMKKGPMGALGLLKGLKLKDLAPETPAIANYTTGEVMGKSSDRLAAEFGISREDQDRFALRSHQRAAEAHASGIYEAEIVAVDGSTEENGIKADSTLEGLGKLKPAFVKPHGTHTAANSSFLSDGASAGLIGSEARALALGLQPKATLRAFDFVAIDPFEELLLGPAYASAKVLADAGLTLDDIDVFEIHEAFAGQVLANLAAMNSDKFAADRLPGRTSKLGEVPMEKLNIHGGSLSLGHPFGATGTRLLTTASNRLHREGKRFALVAACADGGLGHACILERYDA 438
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S1TQ53_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ53_9STRA)

HSP 1 Score: 562 bits (1448), Expect = 2.190e-189
Identity = 285/424 (67.22%), Postives = 341/424 (80.42%), Query Frame = 1 
Query:  178 SRKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPG--VLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERY 1443
            ++  V VDG RIPFVL+ T+YKD +AVDL +LAL+GLL++   L   D+DY+L+G VIQE +TSNIAREA MGAGIP  VPSHTV+QACISAN A+C GAEKILAG ADVV+AGGVETFSD+PIRFS+P+R +L+   K  KKG PG  +  LLKGLK   + P+ PAIANYTTGEVMGHSSDRL+ RFG+SR++QD FALRSH NAAKAHA G+Y++EI+ VDGS +ENG+KG+S+ EKL SL+PAFVKPHGTHTAANSSFL+DGASAALIMSE +AL MG  P++  ++W FVA+DPFE +LLGP +GA KVL   GL L DIDV E HEAFAGQVLSN  AM S  F Q+ +GRS K+G++  +K+N  GGSLSLGHPFGATG RL  TA NRL  E GR+AL+AACAD GLGHA I+ERY
Sbjct:   13 AKNVVLVDGCRIPFVLANTSYKDYMAVDLARLALKGLLDKTA-LPAGDIDYILYGNVIQEPKTSNIAREASMGAGIPQHVPSHTVAQACISANAAICQGAEKILAGQADVVVAGGVETFSDVPIRFSKPLRQKLIRGQKVFKKG-PGAAIPYLLKGLKPAHLVPDAPAIANYTTGEVMGHSSDRLAQRFGVSREDQDAFALRSHVNAAKAHAAGLYEEEIVAVDGSKEENGIKGDSSAEKLASLRPAFVKPHGTHTAANSSFLTDGASAALIMSEEKALAMGFKPKAYLRAWTFVAVDPFESMLLGPTYGANKVLTQLGLGLDDIDVVEFHEAFAGQVLSNFTAMGSDKFGQEELGRSGKVGDINMDKVNTRGGSLSLGHPFGATGARLATTAANRLRDEDGRFALLAACADSGLGHASIIERY 434
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S0Q611_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q611_9EUKA)

HSP 1 Score: 561 bits (1445), Expect = 1.800e-188
Identity = 278/418 (66.51%), Postives = 335/418 (80.14%), Query Frame = 1 
Query:  190 VFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERY 1443
            V VDGARIPF  SGTAY DL+A DL ++A+ GLL +   L P  VDY+L+G+VIQE R SN+AR+A +GAG+P S P+HTV+QACISANQA+C+    I  G A+VV+AGG ETFSD+PIRFSRP+R  L+ LG  + KGL   L L KG+K KD+APE PAIAN+TTGEVMGH++DRL  RFGISRQ QDE+ALRSHQ AAKAHADGIY+QEII VDG+  E GV+G++T EK+ SLKPAFVKPHGT TAANSSFL+DGA+A LIMS+ +A E+GL P++  + W FV+ DPFEDLLLGP + A KVL+ AGLTLKD+DV E HEAFAGQ+LSNLAA++S  F +K++    K+G +P EK NIHGGSLSLGHPFGATG RLV T  NRL RE GR+ L+AACADGG+GHACIVERY
Sbjct:   49 VLVDGARIPFQPSGTAYNDLMAYDLSRMAMHGLLTQTG-LSPSAVDYVLWGSVIQEVRNSNLARDAAVGAGLPKSTPAHTVTQACISANQAICSAINNIQTGQAEVVIAGGAETFSDVPIRFSRPMRKALIKLGSGKAKGLSKQLALFKGMKAKDLAPEAPAIANFTTGEVMGHNTDRLCDRFGISRQAQDEYALRSHQFAAKAHADGIYEQEIIAVDGNVGEGGVRGDATYEKMASLKPAFVKPHGTVTAANSSFLTDGAAATLIMSDTKAKELGLKPKAFLREWTFVSCDPFEDLLLGPTYAATKVLNMAGLTLKDMDVIEFHEAFAGQILSNLAALDSDKFYEKNIPGQQKVGAIPMEKFNIHGGSLSLGHPFGATGARLVTTVANRLQREDGRFGLIAACADGGIGHACIVERY 465
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S2AT36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT36_9STRA)

HSP 1 Score: 560 bits (1442), Expect = 1.810e-188
Identity = 283/423 (66.90%), Postives = 341/423 (80.61%), Query Frame = 1 
Query:  178 SRKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYD 1446
            +R+ V VDG RIPF LS T YK   AV+L +++L+GL+ +   LDP  VDY+ +GTVIQE +TSNIAREA + +G P+ VPSHTV+QACISANQA+  GAEKIL+G AD+V+AGG ETFSD+PIR+S+ IR RL+   KA KKG P ++ L+ GL LKD APE PAIANYTTGEVMGHSSDRLS RFGISRQ+QDEF LRSHQNAAKAHADG+Y +EI PV G T EN +KG++ +EK+ SL+PAFVKPHGTHTAANSS L+DGAS+ LIMSE +ALE+G  P+S  K+W++VA DPFEDLLLGP +  A+VL  A LTL DIDV E HEAFAGQVLSNLAAM S  F+Q+ +G   K+GE+P +K+N  GGSLSLGHPFGATG RLV TA+NR+ R  G+YALV ACADGGLGHACI+ERY+
Sbjct:   17 ARRVVIVDGCRIPFNLSSTVYKKETAVELAQMSLKGLMVKTA-LDPGLVDYIFYGTVIQEPKTSNIAREASLNSGFPIHVPSHTVTQACISANQAITTGAEKILSGQADIVVAGGCETFSDVPIRYSKNIRQRLIQAPKAMKKGAPAIMKLMNGLTLKDFAPEAPAIANYTTGEVMGHSSDRLSSRFGISRQDQDEFCLRSHQNAAKAHADGLYKEEITPVYG-TSENVIKGDANIEKISSLRPAFVKPHGTHTAANSSALTDGASSVLIMSEEKALELGYVPKSILKAWSYVACDPFEDLLLGPTYSTAQVLKRAQLTLNDIDVVEFHEAFAGQVLSNLAAMGSEKFSQEQLG-GLKIGEIPMDKINTQGGSLSLGHPFGATGGRLVTTASNRMLRGEGKYALVTACADGGLGHACILERYE 436
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A2R5G3A9_9STRA (Acetyl-CoA acetyltransferase, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3A9_9STRA)

HSP 1 Score: 550 bits (1417), Expect = 1.140e-184
Identity = 267/421 (63.42%), Postives = 341/421 (81.00%), Query Frame = 1 
Query:  178 SRKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVER 1440
            S+K VF+DGAR+PF L+ T YKD ++ DL ++A +G+++R   +D   +DY+ +GTV+QE RT+N+ARE  +GAG+P+ +PSHT+ QACIS+NQA+C GAEKILAG ADVVLAGG ETFSD+PIRFS+P+R RL+N  KA KKG  G+L LLKGLKL D+APE PAI N++TGEVMGHSSDRL+ RF +SRQ+QDEFALRSHQNAAKAH  G Y  E++ V GST+EN ++G++T+E+L  LKPAFVKPHGTHTA NSS L+DGASA +IM + +A E+G  PRS  KSW FV++DPFE++LLGPA+  A++L    LTL DIDVFEIHEAFAGQVLSNLAA+ S  + ++++    K+G VP +KLN  GGSLS+GHPFGATGVR++ TATNRLH+E  +YAL+AACADGG  HAC++ER
Sbjct:   21 SKKVVFIDGARVPFNLASTTYKDKISYDLARIAAKGVVDRTA-IDKNAIDYVAWGTVVQEVRTNNLAREVTLGAGLPLGIPSHTIGQACISSNQAVCTGAEKILAGQADVVLAGGSETFSDVPIRFSKPVRERLINANKAMKKGPAGILKLLKGLKLSDLAPEPPAIKNFSTGEVMGHSSDRLASRFAVSRQDQDEFALRSHQNAAKAHEAGYYKNEVLNVGGSTEENCIRGDTTMERLQKLKPAFVKPHGTHTAGNSSPLTDGASACIIMGDDKAKELGFTPRSHIKSWNFVSVDPFEEMLLGPAYAMARILKANNLTLNDIDVFEIHEAFAGQVLSNLAALESDAWCKENINMD-KVGAVPFDKLNQWGGSLSIGHPFGATGVRILTTATNRLHQEDKKYALIAACADGGQAHACLIER 439
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S2W305_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W305_9STRA)

HSP 1 Score: 549 bits (1414), Expect = 1.820e-184
Identity = 273/423 (64.54%), Postives = 341/423 (80.61%), Query Frame = 1 
Query:  178 SRKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYD 1446
            S++ VFVDG R+PF L+ T YK  LAVDL + A++GLL +   LDP  VDY+L+GTVIQES+TSNIAREA + +G+P SVP+HTV+QACISANQA+  GAEKIL+G AD+VLAGG ETFSD+PIRFS+PIR+RLL  GKA KKG  G L LLKGL LKD+APE PAI+NYTTGEVMGHS+DRL+ RFG+SR++QD +A+RSH NAA+AH  G+Y  E+IPVDG   EN +KG++++EK+  LKPAF+KPHGT TA ++S L+DGASA LIMSE +ALE+G  P+S  KSW + A+DPFEDLLLGP +  A+VL  +GLT+ DIDV E HEAFAGQVL+NL AM S  FA ++ G   K+G++P EK+N  GGSLS+GHPFGATG RLV TA+NR+ R  G+YAL+ ACADGGL H+CI+ERY+
Sbjct:    3 SKRVVFVDGVRLPFQLASTVYKKDLAVDLAQKAIKGLLVKTA-LDPALVDYVLYGTVIQESKTSNIAREAAINSGVPKSVPAHTVTQACISANQAITTGAEKILSGQADIVLAGGCETFSDVPIRFSKPIRSRLLQAGKAMKKGPMGALSLLKGLTLKDLAPEAPAISNYTTGEVMGHSADRLAARFGVSREDQDLYAIRSHHNAARAHEQGLYKDEVIPVDGEIFENNIKGDTSIEKMAKLKPAFIKPHGTITAGSASPLTDGASAVLIMSEEKALELGFTPKSIIKSWTYAAVDPFEDLLLGPTYATAQVLRASGLTMNDIDVVEFHEAFAGQVLANLTAMASDSFAAENFG-GYKIGDIPMEKINPLGGSLSIGHPFGATGGRLVTTASNRMLRGEGKYALLTACADGGLAHSCILERYE 423
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S3ZZ14_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZ14_9STRA)

HSP 1 Score: 548 bits (1412), Expect = 6.890e-184
Identity = 277/425 (65.18%), Postives = 339/425 (79.76%), Query Frame = 1 
Query:  181 RKPVFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIP-VDGSTD--ENGVKGESTLEKLGSLKPAFVKPH-GTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERY 1443
            ++ V VDGARIPF ++GT YKD +AVDL + ALRGLL +   L   +VDY+L GTV+QE RTSNIAREA M AG+P  +P+HTVS AC+SAN A+C GAEKILAG ADVV+AGG ETFSD+PIR+SRPIR RLL   KA KKG  G L LLKGLKLKD+APE P+I N+TT EVMGHSSDRL+ +FG++R+EQD+F LRSHQNA KAH DG+Y +E++P V+G  D  ENG+K +ST E+L  LKPAFVK   GTHTAANSSFL+DGA+A LIMSE +ALE+G AP++   +W F A+DPFE++LLGP +  AKVLD AG++L DIDV E HEAFAGQVL+N  AM+S +F ++ +GR   +G +  +K+N HGGSLSLGHPFGATG RLV TA NRL REGG+ ALVAACADGG+GHAC++ERY
Sbjct:   17 KRVVVVDGARIPFAMAGTKYKDQMAVDLMRYALRGLLTKTA-LPVTEVDYVLCGTVVQEPRTSNIAREAAMHAGLPHDIPAHTVSLACVSANAAICQGAEKILAGQADVVIAGGCETFSDVPIRYSRPIRKRLLGAAKAMKKGPMGALSLLKGLKLKDLAPEAPSIKNFTTDEVMGHSSDRLATKFGVTREEQDKFTLRSHQNAQKAHDDGVYAEELVPGVEGDADLHENGIKAQSTPEQLAKLKPAFVKNGAGTHTAANSSFLTDGAAATLIMSESKALELGYAPKAYLNNWTFAAVDPFEEMLLGPTYATAKVLDMAGVSLDDIDVVEFHEAFAGQVLANFNAMSSDEFGREKLGRQGAVGTMNMDKVNPHGGSLSLGHPFGATGARLVTTAANRLQREGGKLALVAACADGGVGHACVLERY 440
[Close]
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Match: A0A7S3M7M8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7M8_9STRA)

HSP 1 Score: 545 bits (1404), Expect = 3.360e-183
Identity = 268/409 (65.53%), Postives = 325/409 (79.46%), Query Frame = 1 
Query:  223 LSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLFGTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLGPAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMGRSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYALVAACADGGLGHACIVERYDS 1449
            + GT Y D +AVDL + AL+GLL +   LDPK +DYL +GTVIQE RTSNIAREA MGAGIP+SVPS TV+ ACIS+N A+ +GAEKIL+G AD+++AGG ETFSD+PIRFS+PIR RLL + KA KKG+PG LGLLKGLKL D+APE PAIAN+TTGEVMGHSSDRL+ +FG+SR++QDEF +RSH NAA AHA G+Y  EIIPVDG+  ENG+KG+++ EK+  L PAF+KPHGTHTAANSSFL+DGA+A LIMSE +ALE+G  P++  +SWA+V +DPFE+LLLGP F  AKVL    L+L DI V E HEAFAGQVL+N+AAM S  F    +     +G     K+N  GGSLSLGHPFGATG RLV TA+NRL  EG R+AL+ ACADGGL HACI+ERYD+
Sbjct:    1 MGGTVYGDYMAVDLARFALKGLLTKTA-LDPKSIDYLYYGTVIQEPRTSNIAREASMGAGIPISVPSSTVTMACISSNLAITSGAEKILSGQADIIVAGGAETFSDVPIRFSKPIRKRLLGVAKASKKGIPGYLGLLKGLKLGDLAPEAPAIANFTTGEVMGHSSDRLAAKFGVSRKDQDEFTVRSHLNAAAAHAKGLYKNEIIPVDGNVTENGIKGDTSYEKVAKLNPAFIKPHGTHTAANSSFLTDGATATLIMSEEKALELGYKPKAYIRSWAYVGVDPFEELLLGPTFATAKVLQHMKLSLNDIGVIEFHEAFAGQVLANMAAMGSEKFCADRLPGGKVVGNFDFSKVNTRGGSLSLGHPFGATGARLVTTASNRLQEEGHRFALLTACADGGLAHACILERYDN 408
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA9_9PHAE2.240e-29597.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCM0_9STRA2.600e-23379.72Acetyl-CoA acetyltransferase n=1 Tax=Tribonema min... [more]
A0A7S2UU92_9STRA5.790e-22175.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TQ53_9STRA2.190e-18967.22Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0Q611_9EUKA1.800e-18866.51Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2AT36_9STRA1.810e-18866.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5G3A9_9STRA1.140e-18463.42Acetyl-CoA acetyltransferase, mitochondrial n=1 Ta... [more]
A0A7S2W305_9STRA1.820e-18464.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZZ14_9STRA6.890e-18465.18Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3M7M8_9STRA3.360e-18365.53Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:2512868..2524249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score842.8
Seed ortholog evalue7.7e-242
Seed eggNOG ortholog2880.D7G3H4
Preferred nameHADHB
Model size2936
KEGG rclassRC00004,RC00326,RC00405,RC01702
KEGG koko:K07509
KEGG ReactionR00391,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747
KEGG Pathwayko00062,ko00071,ko00280,ko01100,ko01110,ko01130,ko01212,map00062,map00071,map00280,map01100,map01110,map01130,map01212
KEGG ModuleM00085,M00087
Hectar predicted targeting categorymitochondrion
GOsGO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003857,GO:0003988,GO:0004300,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005759,GO:0005783,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009062,GO:0009295,GO:0009987,GO:0010259,GO:0012505,GO:0016020,GO:0016042,GO:0016054,GO:0016408,GO:0016491,GO:0016507,GO:0016508,GO:0016509,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0016829,GO:0016835,GO:0016836,GO:0017076,GO:0019395,GO:0019752,GO:0019866,GO:0019867,GO:0030258,GO:0030554,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0034440,GO:0036094,GO:0036125,GO:0042645,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046395,GO:0048037,GO:0048856,GO:0050662,GO:0051287,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:0097367,GO:0098588,GO:0098798,GO:0098805,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901681
Exons11
EggNOG free text desc.long-chain-3-hydroxyacyl-CoA dehydrogenase activity
EggNOG OGsCOG0183@1,KOG1392@2759
Ec32 ortholog descriptionAcetyl-CoA acetyltransferase subunit, putative mitochondrial presursor Acetyl-CoA acetyltransferase,
Ec32 orthologEc-19_004630.1
EC2.3.1.16
Cds size1413
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17181.1prot_Ecto-sp6_S_contig8.17181.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig8 2514352..2524210 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350428.6517446-UTR-Ecto-sp6_S_contig8:2512867..25143511682350428.6517446-UTR-Ecto-sp6_S_contig8:2512867..2514351Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig8 2512868..2514351 -
1682350428.80593-UTR-Ecto-sp6_S_contig8:2524210..25242491682350428.80593-UTR-Ecto-sp6_S_contig8:2524210..2524249Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig8 2524211..2524249 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350428.6648085-CDS-Ecto-sp6_S_contig8:2514351..25145521682350428.6648085-CDS-Ecto-sp6_S_contig8:2514351..2514552Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2514352..2514552 -
1682350428.674288-CDS-Ecto-sp6_S_contig8:2515696..25158371682350428.674288-CDS-Ecto-sp6_S_contig8:2515696..2515837Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2515697..2515837 -
1682350428.6877844-CDS-Ecto-sp6_S_contig8:2516280..25163891682350428.6877844-CDS-Ecto-sp6_S_contig8:2516280..2516389Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2516281..2516389 -
1682350428.6988764-CDS-Ecto-sp6_S_contig8:2517038..25172111682350428.6988764-CDS-Ecto-sp6_S_contig8:2517038..2517211Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2517039..2517211 -
1682350428.7175603-CDS-Ecto-sp6_S_contig8:2518471..25185651682350428.7175603-CDS-Ecto-sp6_S_contig8:2518471..2518565Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2518472..2518565 -
1682350428.727097-CDS-Ecto-sp6_S_contig8:2519680..25197631682350428.727097-CDS-Ecto-sp6_S_contig8:2519680..2519763Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2519681..2519763 -
1682350428.7402291-CDS-Ecto-sp6_S_contig8:2520068..25201501682350428.7402291-CDS-Ecto-sp6_S_contig8:2520068..2520150Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2520069..2520150 -
1682350428.758826-CDS-Ecto-sp6_S_contig8:2520786..25209041682350428.758826-CDS-Ecto-sp6_S_contig8:2520786..2520904Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2520787..2520904 -
1682350428.768716-CDS-Ecto-sp6_S_contig8:2521889..25219861682350428.768716-CDS-Ecto-sp6_S_contig8:2521889..2521986Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2521890..2521986 -
1682350428.778254-CDS-Ecto-sp6_S_contig8:2522590..25227021682350428.778254-CDS-Ecto-sp6_S_contig8:2522590..2522702Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2522591..2522702 -
1682350428.7881258-CDS-Ecto-sp6_S_contig8:2524007..25242101682350428.7881258-CDS-Ecto-sp6_S_contig8:2524007..2524210Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig8 2524008..2524210 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig8.17181.1

>prot_Ecto-sp6_S_contig8.17181.1 ID=prot_Ecto-sp6_S_contig8.17181.1|Name=mRNA_Ecto-sp6_S_contig8.17181.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=471bp
MIHQGVTATMRSARAATVSSRAAAAAAARASCGRRANSSSASSSTSSRKP
VFVDGARIPFVLSGTAYKDLLAVDLGKLALRGLLNRNPELDPKDVDYLLF
GTVIQESRTSNIAREAGMGAGIPVSVPSHTVSQACISANQAMCNGAEKIL
AGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKG
LKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQN
AAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHT
AANSSFLSDGASAALIMSEGRALEMGLAPRSSFKSWAFVALDPFEDLLLG
PAFGAAKVLDDAGLTLKDIDVFEIHEAFAGQVLSNLAAMNSTDFAQKSMG
RSAKLGEVPTEKLNIHGGSLSLGHPFGATGVRLVATATNRLHREGGRYAL
VAACADGGLGHACIVERYDS*
back to top

mRNA from alignment at Ecto-sp6_S_contig8:2512868..2524249-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig8.17181.1 ID=mRNA_Ecto-sp6_S_contig8.17181.1|Name=mRNA_Ecto-sp6_S_contig8.17181.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11382bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:2512868..2524249- (Ectocarpus species6 EcLAC_371)
CTCTATCTGTTTCTCGCCCACGCACACTGCAGAAAGGCCATGATTCACCA
AGGAGTCACCGCGACGATGCGATCGGCGCGAGCCGCAACGGTGTCCTCGC
GCGCAGCAGCAGCAGCAGCAGCAAGAGCTAGCTGCGGCCGCCGAGCAAAC
TCGTCTTCAGCGAGCAGCAGCACCAGCAGCAGAAAGCCCGTTTTCGTCGA
CGGTGCTCGCATCCCCTTCGTCTTGAGTGGCACCGCATACAAGTGAGCTA
GCATTGTTCGTCGTTCCGGTCTGTTCGCGTTCTTGCCTCGCTCACCACAA
GCTCGCGTCTTGTAGTGACAGAAGTGGATCGCGAGCGGGTTATTGCGCTG
TGGATTTGAGAACATCCGCCCGACGAACAGGAACGAACGTTGCAGCGATG
CTGCTATGTAGACCCATGGAGTAACTGCTGTTGTGCACGCAGGTCCCGGT
GCGGAAACCGTCTGCCGCAGCGTGCGCTTCGTTTGTGTCAGGTGGGAGAG
AAGATCTATAGCATCCACAGTGAATGGGAACGGCGCGATCTACAAGTTGA
TGTGGGAACCTCCGCCGTTTTTGGTTGCAGTTGAAGTTTTGGTTTTTGGT
TCCAAATCTCTCCGCACCTGCACCCAATGCAGATGCAACGGTAGCGTACA
CAGCAGTTGAGCAGCCAGAGTTATGCACGAGCCATTGAGCTGTCAATGCA
CCTATCCCTCAGACTCATGGGTGTGCATGTACCGGACACCTCGAAATATA
ACCGTCGGTTTCAGAAGAAAATGTTCGTCGACTAGATTCTCTGTACTGCA
GCTGTGTCAGGTGTCAGGTGTATATACAGCAGGTACACCCGTGTACTCGT
ACCTCCACTACTGCTGCATCATTACCACAGAACTACTGCTGGGCACATAG
TGTACCGAATGGACCCTCGAGGGCGCCAGAGCTGAGCGGTTCCTTTGTTG
AGTTGACAGAGTTCCGCGCTATTTGTGGTGAGATCCTTACTGACAGCACA
CCGTCACAAGACAGAGATCTGCCCTCCGCACTCCCTGAACTCCGTATTAT
GTGGCACAATGTCCCACTCTAAGGTACAGTGCTACTGTACACTGTACACC
CCTTGACCTGCAGCACTGACAGCACCACAAAACAGGGTGGCGGTACTCGG
CTTCTCACGGGATCGACACGCGCCAGAGAATGTTGTGCTCTCAGATCAAG
TAGCTTGGGGGGTTGCACAGGATGCGATGCCACTCAGACAGGCAGCGGCA
GCCAGCTAAGAAGTCTTGTAGGTTTTCCGCTGGGGTTCCGTGTTCTTGTG
CATTATCCTCGTGGATAATTGCACATTATTCCCAGGGCTAAGAATAAGCC
TCCCTGAATCTCTAGATCACCCCTCTCCCCAGTAAGCATCATCTCTGGCT
TGTCCTTAACCTCTGCTCCTTGTCTAGATGAAAAACTCTCACAACCATGC
GAACCCCCTTCCAACTTGCCCTTCTGTGGATGACTCTCCTCAACAAGCAC
CCCCTTCTGTTACAACTTGTCAATAACCTCTTGCGCGCCCCACCCAGGGA
TCTTCTCGCTGTTGACCTCGGCAAGCTCGCCCTGAGGGGGCTGCTGAACA
GGAATCCGGAGCTGGATCCCAAGGACGTCGACTACCTCCTGTTCGGGACT
GTCATCCAGGTGCAAAAACGACCAGCCCGTGGTAGGCTTCACTAACAACA
GCAGTGTCTAGCAGCAGCACTCGAGACGGAACTACGCGGCTAACGTTTTC
TTACCATGTGTACAGACGTGCGGTGTTTGCGCTTGCTTCTAGAAACGCTG
ACAAGACTGTCGTGAAGTTTGTGCGATTCTGCCAATTATCGTTCTGAAGC
ACCACTGCTGTACATGATGAAAGAGGCGTTTATTTCCAATTCTAGTTCAA
GGAACACAGAAGAGGCCTCGAAAAAGCGTTGCTTGACACGCTACTGGTGC
ACGTTGCGGGCTGCCTGTACCGCTGAATCTGCTTTGGGTGTCATCCCTTG
AAGGCTTGTTTGACGGGGGGAGGCGTTCGATCGACACGCCAACGGCAAGC
TCGCACTACATCCTAGGCGCAGGTCACGAGATAATTTAGAAGTGATTCGA
GCGGAAATCGGGCCAACAGCCATCTTGTATTGTATTGCCCGATTTCACGG
TGCACCAGTTCACCTTAGCGTACGAGCTATCGTTTCTCTCTGTCCGCCAT
CTGCTGCTGTCGTCGACTCCCTTCAAAACTCGCGGCTCGCTTTGCCTTTG
TCTCGTTTCTCAGGAGTCGAGAACGTCCAACATTGCACGCGAAGCCGGGA
TGGGGGCGGGGATTCCTGTCTCCGTCCCCTCTCACACCGTCAGCCAGGCG
TGCATCTCTGGTGGGTTGTCTGCGTCGCCCCCGTGCAAGTCCATGCCGTT
TTCGACCGCCGTTAATGGCGGGTGGCCCCCCCTTGCTGTGGGCGGGAACC
AAATAAACGTTTTTTTGATGTTTTTGGTGTGCCGTGCGATGCCGCGATTG
ATCGAGATGTTAGATACTATTTTCCATCGAAGTTTGACATCTCTCTTCTT
GGAACGTGGTGCGTTGTTTTTTTTGGGTCGTGTTGCGTGGTAGGACGCGT
TGCTGTCCGCAGGCTTTTACGTGGTTTGTGCCTTGTTTTCATGTTTCCTT
GTGTCGGGTTTGGCTTTGTAGAGGCTCGCGCCCTTCGCCGAAGGCGACTT
GATATCGGCTGCTTTTGCTTCTACTCGATAAGCATAGAGAACAATTTTGT
CTTTTCTCTTTGATGTTGTCTCGCTTGTTCTCATCTCTCGCGGTCCACGC
CGCCGCGAAAGACTGGAAAAAAATGAAAAATGCGAAGAATCCCGCAGGGG
TCGCACAAGACGCGCGGCGCTAGCTCATCACGAAAGTGCTCCGTAAAACC
GGCGATCCTAGCATCTGAGCTCTGCCTAACACAAAGGCTCTGAATCATAT
CGTATAGATCATTATGGCTGAATCGCCATGTCGTCGTTCCTACCCTTACG
GACGTAGATTGCTACCCTTGTCGCAGAGATATGGACGAACCGGGACTTAA
GCCTAAAAGTTCCTATCCCCTTTTTTTCTCTCTTGATTTGTGACCATGGG
ATCAGGCGGCGGGGGAAGGTGCAAACCCTGGTGCTCGCCCTTTTTGTTGG
CCGCGTAGGCTATTGTCTTGTTGACGCCACTCGCCGTCCACATGCATTGC
CTCCAATGCCGGGTCCCACCCCTTTTGTGGCCGTATCGACCCCCACCACA
AACGTTTTTTTCTCCCGTGCTTTTCTTTTAGCACCTCTCCTCTCTCTTGG
CGTGTACATTGATTGTCGTGCTGTTCATTTCCGTTGTCGCCTCAGCCAAC
CAGGCCATGTGTAACGGTGCCGAGAAGATTCTCGCCGGTACCGCCGACGT
CGTGCTCGCTGGTGGCGTGGAGACGTTTTCGGACCTACCTATTCGCTTCT
CGCGGCCAATCAGGTACGCCGCACAGCATCCATGACCGATGGGCTCTCGT
TATGTAGTTGCTGATCTTTCATGCAGGTGTCGGTGATTTGTTGGAAGATG
TTGGTATCGGTTGCATGGTGTCCTTGTCGTGAGCCTTTCCCTGCTTTTCA
CAGAGCCCCTTTTTGTCATCCAATTTTTCCAAGACAGTACGCAGCCTCTG
TCTACCGTGTGCTGGCTCCGCACCTACCGAGAGAGCTCATCCGATGCCAC
ACACAGAAGAGTGGCATTCCTCTGAGGTGCACACCTCCCTTCATTTTTCA
CTCACCCGAAGAAGGCACGCAGCCAGCCGTCCTGCCCCCGCGTGCACTCA
AAGAACAAGCGCTATCCCGCCACCGCGTGCTCGTTTTTTCAGCCACGACC
TTTATCCTTCCACAAAAAAAAATCGTTCCCGAGGGGGTGAAATAAACAAG
CAACCTAGGAATTTTCGTTGTTTTCGCTGGTACTCAACGTTTAGACGTTG
TTGTTCGGGGGCGCGCGCGTGCACCGCTTTGATTCGAGCTTTTTTGCTAC
TTGGTGGTACACAGCTTTCGGTCGCTGTGTCGATCGGCAAGTCAGCAACC
AGCAGCCAAACGATCCGTCGTGTCCGTCCCGCGCGTGTCCGGCACACAGG
AACCGCCTTCTTAACCTAGGGAAGGCCCAGAAGAAGGGCCTTCCGGGCGT
CTTGGGGCTTCTGAAAGGGCTAAAGCTCAAGGTAAATCAACCTCATGGTA
AAATCGAACCTCTCACCCCGCCCAGCGAGCACGCGGTAGATATTTCGTAG
ACAGCGAGTTCGGAGTGTTCATTGTTTGCGGTGGGGAGAGACGTCGTGAA
AGGTTAAGTTAAAAGTACTCCCCCTTTGCAAGGCTGCGCAGGGGGGCTCC
GCGGTAACAATTATTTTCGCTCCCACATATGTTTGGGCGTACCGCTTTCA
TCGTCAAACCCTCACTCTCTATCTCATCTCTCGTGTGGTGCACCCTGGTG
CATGTTGTCCGGTGCGCTTGTTGTGGGGCACCGTAGGATATCGCTCCGGA
GACGCCCGCCATCGCCAACTACACGACAGGGGAGGTTATGGGGCACAGCA
GCGATCGCCTCTCCGGGAGGTAGGTATCTACTATAATACGTAGATTGCGT
TACGTATCTTCGGAGATTTGATTCCGTTGCCAAGTTGAAGGCTGGCTGAA
CAACGTTTTTCGTGAAGTGGGGTGAGGAAATTGTGCATTGCCGGGTGCCG
ATCGATAACAAGTTATATTCCAGCTGAGGTGCTGGGCGGAAAAGAGGCTT
TCAAAACGTGACAATCTGAAGGGCCGCAGTGACCTGTTCTAAGGCTCCTT
TTCGATTGGCGTGGCGCGCGCAGCTTTGAGTAGTTCGTGGCGACGCGAGG
AAAACGTATAATGACCAAGCGTAGCAAGAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAACAGCAGGAGCAGGACTAAGATGTCCCCTGGAGATCCTGGC
TCCTCATACAATTCACGTCGCTCTGATTCATGATTCTGAGTTTGCCAGCA
AACGTTCCCATGAATGCATACCGTGAGAGGCGGAGAGATGACACCCCCCA
TACACCGTTTTCACAGCTCCATTGCTCGACGTCCAAGCTCGTGCCAACAC
CAATAATGGTGCTTTCGGAAACACCTTATCGAGGGGTTTCCGTCGACGTG
TTGGGGCTCTTTCAGCACCCACTTGGTTGCTGAGCAATCGAGCTTAGAAG
GTCGATCTAGGGGAGGTGCCATCTCTCCGCCTCGTACGGTAGGCTAAATA
GGAGACAGAGATTGTTGTACGTGTGCCGTCGTTGGGGTAAGTTTCCCCCA
ACAACGTGTTCTCTTGACACCTTGTTGTCATGTTTGACAACCTTCGTAGT
GTATATACCCTTGGCCGGGACGGTGATGGTGCGCCCATCACCCCGTTCAT
TCCTCGCCGACGGCCTTCTCGTTAACTCACGAGCCTCTAGCAGGAATCAA
ACGGAAGAAGATCCCCGTGCGGTGCAGGCCTTGCCCTTTTTGCTGCGACA
GGGGTTAGGGTTCGTCTGGATCGGTTTAAATCCGTCTGAAACGTTCTTTC
TCCCAGGTTCGGGACGTTCCGCGGAACTTTTTCCCGATCTTTCTTCTTTG
CAGCTGGCCTGGGTCCATGTTCCGCTTATGGTGAAATTGACTTCGTTTCG
TGTCTCATGGGACGTTAATTTTATAATGTGTCAGGTTTGGTATTTCAAGG
CAGGAGCAGGATGAGTTCGCGCTGCGGTCCCACCAGAACGCGGCAAAGGC
CCACGCGGATGGCATATATGACCAGGAGGTATGATATGCATGCGCAAAGG
GTAGCACGCACACGCCCATCCTTTCCGTTGCTTGGCGCGAGTTTTTGGGT
TAGGTTGAGTGCCTTCATTTCTGGGACGAACCGCGTGTGGCAGGTGTTTC
CCCCCTCTGGTATATCTCGTGTGGTAAGTTTTTCCCCTTGAGTCGAATGT
ACGCTGATTCCCGTCCACCACTCTCCGCCGCTTTCCCGTTCGGGAGACTG
ATAGTCGTGTCCCTTCAGGGCGACGAAGGCCCAGATGAACCATAATACCG
GTAACTCGTAAGGTATTTGCCTCTTACTCTTATTGGGAAAACGTTCGGAA
CGTGCCAAGTATCGAGCCATGGTAGAGCTTCATTTGGCCGACAGCACCCT
CTCCCCCGCCGGGCTAGTTCCGCCCTCCCCCAAGCTCCCATCCCGACAAC
AGCGGAACTACAGTACACTACCACCGTAGGTAACGTAAGATATCACACCT
GCTGGGCCAAGTTTCAAAGCTCGGATGCTCCAAAGCATCAACTACTTGGA
ACCGTCTTGTCGAGAACTTCCCAAAAACGTATCGTTTGTTAAGTACCGCA
TCATTTTCGTCGTGGAGTAGTCGAACGTTGAAAGTTTTGTCCAAGGGGGT
ATGGTTTCTTGTGTCATGTCACCTAAGGTACAGCTGTGTTGTACTTTCGC
AGGCGCCAACGCCTTACAGCTGGTGGGATGCACCTGTCTCCGTCGTATTG
ATGCTGCGGATTCGGCTTTTGAATTATGTCATCCCGGCGCGAAAGATAAA
ACGCCGGGCGAGGGTTAGAACGGCAAGACCTATCCTGCTGTGTTAGCAAG
AACAATGTAACGATGGATGTCTGGCAAGCACACCACATCTACATCAAACA
GGGTACTGCGGTATACCCCCGTCCCCTCTTTTTCAATTTTGTGATTTTTC
AAATTTAGCAGCGGAGTTCTTCCTTTGGACGGATATAATTTTTCGGATGT
AGTAGCGGAACTTTTCCATTGGACAGACGTAATTTTAATTTTCGCCGGAT
GTAGCAGCGTAACTCTTCCATCGGACAGACATAATTTTAATTTTCGGATG
TAGCAGCGGGAACTCTTCCATTGGACAGAAGATCCACCGAGAACAGCACC
CACCACCACCACCACCACCACCACCACCACCTACTGTTACGTGTCCGTGC
CCCGCCTTGCGCAAGCGCCCCCTGATCTGCTTGTCTCTGTCGACCATGTA
CTTGCGCCTCATTGATTGATTCATTCTTCCCGGCACAGATTATCCCTGTG
GACGGAAGCACCGACGAGAACGGCGTGAAGGGAGAATCCACCCTCGAGAA
GCTGGGCTCGCTCAAGCCGGCCTTCGTGAAGCCCCACGGGACGCACACCG
CCGCCAACTCGTCCTTCCTCAGCGACGGGGCCTCGGCCGCGCTCATCATG
TCGGAGGGCAGGTTGGTGTCTTGTCCGCAAGTCCCCTCTCGATACCGCGG
TAGAATGGGTTCGGTTAACTTTCTGCGACTTTTTTGTTGTCAGTGTGCTG
ATATTGGTTTAATAGTAACCCTCGGCCGGGAGCATGATGTAGGAGGGCAG
GTTGGTGTCTTGTCCGCAAGTTCCCTCTCGATACCGCGGTAGAATTGGGT
TCGGTTAACTTTCTGCGATATTTTTTGTTGTAAGTGAGCTGATAATGGTT
TAGTAGTTATCCTCGGCCGCGCGCATGATGTGGGAGGGCAGGTGTGTCTC
GTCCGCACGTAAGTACCTTCTCGATAGAGTGGAATCGGTTGCTGCTTCAA
ACTTGTTTTTGGAAGTTTGCTGATACTTGGAAGTACTCCGGGTGAGTGAA
TCAGTTTGTTTTGACGTTTGCTGATGTCTGTTAGGTACCCTGTTGAATCA
CAAAGTGTGTGCAATGCTGTTGTTGTAGCGGTTAGGTCGTTTCCCCGCCC
AGCAGTGATGCCGCAGCGTTTGCTTCCCTTCCCGCCCTCCAAACTTCCTT
TACTCACTACACGGGAGGATGGCGCATATCCCTTCTGAGAACTCGCTACA
GCAGCACCCGTCGTGCTGTCGTTCGCGTCTGACATCAGATCGTTTTTTCA
TTTTTGTAAGGGCGCTGGAGATGGGCCTGGCGCCGAGATCGAGCTTCAAG
AGCTGGGCGTTTGTGGCCTTGGACCCGTTCGAGGACCTCCTCCTCGGACC
CGCCTTCGGCGCTGCTAAGGTAATTTTTTTCAACCCGTCTATATAGATCT
ACCCTCCTTTCTGCTGCATTTTTCAACGTATGGTGTGGTCTTGGCAAAGG
AAGGCACAAATCGACTTATCGTAGCCATCGCCAACCACTTGGCATATGAA
GCCTGTTGTGTGCGTGTGTATTTTTTGTTTTGGGTATTTTTTATTTTTCA
GGTTTTGGCAGTATATTTACCCAGCAGGCGGCGTACCCGGCGCTGGTGTG
CCGGGAAAACGACCCAGGGTCACCCGGCGGAGTTGACCCCTCGTGAGGGA
AAAATTATCCCGTTTTCTCCATCACATGTCACAGCCAGCACATAGTGACA
CATTTGATTTTTTTTTTTACTTCCGACAGGTGCTAGCCATCAGGCGTCGA
ATCACAGTAGCCAGCACATTTGTGTTAACATGAGGGATTTTTTCGATTTT
TGTTTCCGACAGGTGCTAGATGATGCCGGCCTCACGCTGAAGGACATCGA
CGTCTTCGAGATACACGAGGCCTTCGCGGGACAGGTGCTTTCCAACCTGG
CCGCCATGAACTCGACCGACTTCGCGCAGAAGAGCATGGGGAGAAGCGCC
AAGGTGGGTAACTATCTTTCCCGGTGTAGCCCCCTTACCATAAGGTTGGC
GAGTCAGCGCACAGGGGTGCGAGCGATTTTCGAAGCGTAATTTCTCCACA
ACCCGGAGGTTACCACTACTGTCGAGTAGGGCGGTTTTGGAAATGTCTCA
TCGAGAGCTTTCCTGAGAAATATCAGTTGGCGCTCGCACCCTCCTGGTTG
TGGAGAAATTACGCTTTGAAAATCGATCGCACCCCTTGTGCGCTGACTCG
CAACCTTACGGTACCGCTGGTTGTACAGTGGCAAAGTAAGAGGCGTGCTT
CTACTTGGAGTGGGAGTTACATTGGCAGCGTTTCGTCTCGATAGGGGCAA
TTGGTGGCGATACCGCCAGTCGCATGGCCAAGAAATGTTTTTTCCCGCCC
AGTTTTATATTGAGACTCTCCTCGCCCTACGAGCAGTCTCGAGGTGTTCG
GTGTCCTTGACCTTGATGCTTGTTTTCCTCCTGGCCGAAATGATCCCGCG
TACTCCTTCCCCGGTTTTGGGTGTGCGTGCGAGGGCGTGCTCCTAGGCGC
AACGCCTGAACCGATCACAAGGCAAAGTAGCCGTATTTACTTGGCATCCG
TGCCGTGGCACATCTTGTCTGCGTAGGCATGCGGTTGCGGGGGTCGCCAG
AATGCATCCCCGTAAGTATGAACGTTTGTTGTGTACCCCCTCTTTCGTCT
TCCGTGAGAAACACCGAGTGACTTCTTTTCGCCGAGCGGCCTAGTGACCT
CAATGCTTGTTAGCGTCAACGTTACAGCGTCAGCATTAGGGTTATCAGGG
CGCCCTTCCTCTCCGTACCCAACGCTGCCACCCCTTCCCTGCCGAACTGA
GACTTTGTTGCCATCAGACATGACAATTAAACGAACCATATCGACAATAT
TATTCTGTTCGAAGGGCGCAGGGAGATGAGAGATGACGAGAAGAAATACA
TATTTTGTTCGAGTAAGGAACACGGGGCCACATCAATGACCTCCCCCTTC
CAATCGCTACCGCTGACGCCCAAAACTGGCTTTTAAGCCCCCTTCCCACA
TGAGTCAACAGTTGTCCTTTCGCCCACCCTCCACCGCTTCTTCGAATGGT
CAATCAACACATCGGTCGCTGTCAATCTCTTCGTCTCTTGTTCCCAGCTG
GGCGAAGTGCCCACGGAGAAGCTCAACATCCACGGCGGCAGCCTGAGCCT
TGGGCACCCGTTCGGAGCCACGGGCGTCCGCCTTGTGGCGACGGCTACCA
ACAGGCTGCACCGCGAGGGGGGGCGGTACGCGCTCGTGGCGGCGTGCGCG
GACGGGGGGCTCGGCCACGCTTGCATCGTCGAGCGCTACGATAGCTGAAG
TGGAGGGGGATTGTTGCTTCCTCTACTTTTGGGATAAAACCCCGGCAACG
ACAGGGAACAAGAAGACATGGAAAGAATGAAGTATGGGTGGACCCCGTAC
CGTAGCAAGAGGCCCTTTGGCGTAACGCAAGGAGATGGAGGGTGTCGTTT
GCCCCGGGCGTGTGCATACGTGGTGAGGCGCCCAACGATCCGTGTCGTCG
CCATCGTCCATCGCTCCAACCTCGGACCAGGAGCGCGGGTAGTAAGATCT
GGTGCTCGACCCAATGCGATTTATCTAGGCGTTTGGTTGGCGGAAGGCCA
AGATGTAGAGTCTGGGGGGGGATTGCCAGCGGGAAGGAAATACCTCCTTC
GGTTGTGAGAGGATTCTTTGCGTTATTGTACAGCACCGCGGGGTGGCCTT
GCCTGCTCATTGTGGCTCCGGCGGTCGACCAAAGGCTGCGGATTGTGTGT
GTGCGTGTGCGTCGTTTCATCCAGGTGTTGAATGTGTTGCTTCTGGAACA
CGGCACGAGGGTGTGTGTACAAGTAGGTGTTTTCTACGATGATGGAGAAC
TGCAGATATAGCAAAAGGACGCGCTTTTCGGACGTAAAGGATTATCGGGG
TAGTGGTGATGATGTTGCTATCAGTGCTCTGGTGCTAGCAGTGTCTCGGG
CCGATGACCCTGCCTGTTGTTCTTCTAACGATTTCTGGGGGGGTCCGCGG
TCAAGGGAAGGTGGTACTCACACCTACTCACACGTCCAGTTTGTCCTTTG
TAGGCACCGTCATCAAAATTTGTGCGTCGACCATCCTGTCGGCTCCCGAA
GTCCCGCCAAGCTGGCGCTTGGTATAACTACCCACGGTAAGCACTGCTGT
GCACGGGATTCCGCGCTGTCCGCTACGGCCAAATCAGCATGAGCAAGGTT
TGTTTGTAGAATAGTGAGGACTGGACAGAAAGAGGGGGGAGTATCCCGTG
GTTCGCTGTGAACCGCGCTGCGAGAGGGTGGAATGAAAAGGCCGATATGC
GAGCTTGGAAGGAGAGAGGGGATGGGGAGAAGGCGTGTCTTGTGAAACGG
CCTGCCTGCGATAGAGGAGATAGAGCACTCTGGTTGGTCTACAGCAATCT
CTGGAGCTGTCTGCCGACGCAGGGTATTGCTTTTTTGAACATGCACAGCT
CACGTGTGGAGTTTTCACGTACGTACGTATAATATAGAGGCTGGGAAGGA
GGGGACCGGGCTTTTCTTGCCGAAAGAAGGCCCACAATTTTGCGCTCGTC
AATTCGTTCCAACGACGTTGTCTTGTGTGTGTGACGTGCAAGTTGCTACA
AGGACGAAAGGGAGTGGATTAGGCGCGTCCTGAACCGAACAACAACAATA
TCACGATTGTCACGGCGTGTACGACGTAGTTGAGCACCCAGCGTTTCGAG
TGGCGGCGAAATCACATCATCAGCGCAGCCGGTCACACCATCGAGAATGG
AGCCTGAGCTGTTTGCGCTCACAGAAGATGCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig8:2512868..2524249-

>mRNA_Ecto-sp6_S_contig8.17181.1 ID=mRNA_Ecto-sp6_S_contig8.17181.1|Name=mRNA_Ecto-sp6_S_contig8.17181.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1413bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:2512868..2524249- (Ectocarpus species6 EcLAC_371)
ATGATTCACCAAGGAGTCACCGCGACGATGCGATCGGCGCGAGCCGCAAC
GGTGTCCTCGCGCGCAGCAGCAGCAGCAGCAGCAAGAGCTAGCTGCGGCC
GCCGAGCAAACTCGTCTTCAGCGAGCAGCAGCACCAGCAGCAGAAAGCCC
GTTTTCGTCGACGGTGCTCGCATCCCCTTCGTCTTGAGTGGCACCGCATA
CAAGGATCTTCTCGCTGTTGACCTCGGCAAGCTCGCCCTGAGGGGGCTGC
TGAACAGGAATCCGGAGCTGGATCCCAAGGACGTCGACTACCTCCTGTTC
GGGACTGTCATCCAGGAGTCGAGAACGTCCAACATTGCACGCGAAGCCGG
GATGGGGGCGGGGATTCCTGTCTCCGTCCCCTCTCACACCGTCAGCCAGG
CGTGCATCTCTGCCAACCAGGCCATGTGTAACGGTGCCGAGAAGATTCTC
GCCGGTACCGCCGACGTCGTGCTCGCTGGTGGCGTGGAGACGTTTTCGGA
CCTACCTATTCGCTTCTCGCGGCCAATCAGGAACCGCCTTCTTAACCTAG
GGAAGGCCCAGAAGAAGGGCCTTCCGGGCGTCTTGGGGCTTCTGAAAGGG
CTAAAGCTCAAGGATATCGCTCCGGAGACGCCCGCCATCGCCAACTACAC
GACAGGGGAGGTTATGGGGCACAGCAGCGATCGCCTCTCCGGGAGGTTTG
GTATTTCAAGGCAGGAGCAGGATGAGTTCGCGCTGCGGTCCCACCAGAAC
GCGGCAAAGGCCCACGCGGATGGCATATATGACCAGGAGATTATCCCTGT
GGACGGAAGCACCGACGAGAACGGCGTGAAGGGAGAATCCACCCTCGAGA
AGCTGGGCTCGCTCAAGCCGGCCTTCGTGAAGCCCCACGGGACGCACACC
GCCGCCAACTCGTCCTTCCTCAGCGACGGGGCCTCGGCCGCGCTCATCAT
GTCGGAGGGCAGGGCGCTGGAGATGGGCCTGGCGCCGAGATCGAGCTTCA
AGAGCTGGGCGTTTGTGGCCTTGGACCCGTTCGAGGACCTCCTCCTCGGA
CCCGCCTTCGGCGCTGCTAAGGTGCTAGATGATGCCGGCCTCACGCTGAA
GGACATCGACGTCTTCGAGATACACGAGGCCTTCGCGGGACAGGTGCTTT
CCAACCTGGCCGCCATGAACTCGACCGACTTCGCGCAGAAGAGCATGGGG
AGAAGCGCCAAGCTGGGCGAAGTGCCCACGGAGAAGCTCAACATCCACGG
CGGCAGCCTGAGCCTTGGGCACCCGTTCGGAGCCACGGGCGTCCGCCTTG
TGGCGACGGCTACCAACAGGCTGCACCGCGAGGGGGGGCGGTACGCGCTC
GTGGCGGCGTGCGCGGACGGGGGGCTCGGCCACGCTTGCATCGTCGAGCG
CTACGATAGCTGA
back to top