mRNA_Ecto-sp6_S_contig8.17032.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: D7FYX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYX5_ECTSI) HSP 1 Score: 673 bits (1737), Expect = 1.240e-237 Identity = 351/358 (98.04%), Postives = 352/358 (98.32%), Query Frame = 3
Query: 90 MGVSRRCSALAAFVALAAVSSECQAFINCFLRAGERTPPSAATTSMTSFRHSSSGWCGTARAKDCGALLMSEVAEDYPSDTGDDRFAGGAGTAEQERLAFTEKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGTETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQGQVFVFAREDDGELR 1163
MGVSRRCSALAAFVALAAVSSECQAFINCFLRAGERTPPS ATTS TSFRHSSSGWC ARAKDCGALLMSEVAEDYPSDTGDDRFAGGAGTAEQERLAFTEKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGD FDGSTVA TIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGTETKLRVAKTQVRKSALGRLLKPLFNLD+IEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQGQVFVFAREDDGELR
Sbjct: 1 MGVSRRCSALAAFVALAAVSSECQAFINCFLRAGERTPPSEATTSTTSFRHSSSGWCRMARAKDCGALLMSEVAEDYPSDTGDDRFAGGAGTAEQERLAFTEKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDSFDGSTVAATIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGTETKLRVAKTQVRKSALGRLLKPLFNLDNIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQGQVFVFAREDDGELR 358
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A0G4FU97_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FU97_VITBC) HSP 1 Score: 125 bits (314), Expect = 1.910e-28 Identity = 93/260 (35.77%), Postives = 134/260 (51.54%), Query Frame = 3
Query: 384 AFTEKDTPEVAQLKLDLLRIAALTGRGQLATP-AERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGTETK-----LRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQ-GQVFVFAR 1142
A + ++ + LK++LL AA +GRGQ A A R + ++ +LE P ATS L G W LVYASED TRSSPFFWAFRKA EGI+ P F +A ++F +TD LP KS+GE+ Q I + ++ F + R F S MTT + G E + + + KT+V S + RLL F D +++ + L +K+GS+ V ++LD LR+ RN++ G VF + R
Sbjct: 20 AVSAPESNPLEDLKIELLESAAASGRGQFALEGASRATFDSILADLEALNPTPAPATSPLLKGTWRLVYASEDVTRSSPFFWAFRKALEGIRDPL------RTFGSDQLAESLFGLTDRLPFKSIGESRQRIEGSPMPNQ--RFRPERLTNQVR----VGVFGLGESKMTTECSVAPQEGPEARDDVLNVTIEKTKVLDSTISRLLP--FLDGDSAYESKSSLENIKQGSSVVEKRISFLDEDLRIVRNDRDGHVFAYWR 265
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A7S4FYH2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYH2_9EUGL) HSP 1 Score: 124 bits (312), Expect = 3.620e-28 Identity = 96/270 (35.56%), Postives = 139/270 (51.48%), Query Frame = 3
Query: 339 DRFAGGAGTAEQERLAFTEKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPG--KSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGTETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQGQVFVFAR 1142
D GGA T + L+ LL +AA RGQ P + +++++I +LE+ + T+ L G+W LV+ASED TRSSPFFWAFR+A D D ++AITDS+PG K +G AVQ I+ E E S S + P T SVM TTS I D ++ L+V +T+VR++ L PL++ + F + L ++G++EV MTT Y+D L+R+S+N+QGQ FV+ R
Sbjct: 32 DLCTGGASTRLAMATVSGAGEEVTTQSLRGRLLEMAARADRGQTENPQDNTQIKEIIDKLELA--MIGQGTTARLDGKWELVWASEDVTRSSPFFWAFRQAYP------------DNAD------QVYAITDSIPGQLKEIGRAVQNISGAEGPGE------GSLESRVVIRALPGTPLPLESVMITTSAIVDRNRSQVTLKVDETKVRETTL-----PLWD-KTLPFPSGVALELARQGASEVVMTTLYIDELIRISKNDQGQTFVWTR 269
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A7S0TMF4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TMF4_HEMAN) HSP 1 Score: 119 bits (298), Expect = 6.250e-26 Identity = 91/272 (33.46%), Postives = 132/272 (48.53%), Query Frame = 3
Query: 366 AEQERLAFTEKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNT-----------FPSFRSVMTTTSEITDAAGTETKLRVAKTQVRKSALGRL--LKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQGQVFVFAR 1142
+E E + P + ++L++ AL+ RGQ AT AER ++ I L T S+ L G W LVYASE TRSSPFFWAFRKAT+ P +++ +FAITD +P S+G A QTI+ G++ RG ++ P +TT+S + D + +L V T+V+ S G + L P F + ++F + L +K GS+ V MT Y+ +RV+RNE+GQVFV R
Sbjct: 63 SEDEPILAKVDRAPASQGSEAEVLKLCALSNRGQGATLAERDDIDAAISRL---TASSSGCDSSLLNGDWRLVYASEAVTRSSPFFWAFRKATKSTMQPLP-------LLPPSLSEALFAITDGIPFASIGRATQTIS--------------GMGAEGRGGSLVSSVEVSLRVFDALLPPNVGYVTTSSRLLDMGEGKVRLTVETTEVKDSTWGEIPVLGPAF--EGVKFPSGEALEGVKPGSSSVDMTVEYVSDEMRVTRNEEGQVFVHVR 308
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A813JGD2_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGD2_POLGL) HSP 1 Score: 107 bits (267), Expect = 6.220e-22 Identity = 90/253 (35.57%), Postives = 122/253 (48.22%), Query Frame = 3
Query: 417 QLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALL-GRWALVYASEDATRSSPFFWAFRKATEGIKPP-------FGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDA--AGTETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNE-QGQVFVFAR 1142
+++L LL AA T RGQ +P R ++ +E P A+ T LL G W L+YASED TRSSPFFW +RK +GI+ P FG ++ +IFA TD +P ++VGEA Q+I + + S V I F ++VMTT+ A G+E + V TQ S L P D F ++ LL S + M TYLD LR+ RN+ GQVFV+AR
Sbjct: 80 EVRLQLLASAAATCRGQCGSPLAREGALQLVKAMEALNPTAAPASDTGLLEGDWRLIYASEDVTRSSPFFWGWRKMLKGIRDPTPVSLQLFGT---------EEISESIFAFTDGIPIRTVGEATQSIKDGRLISRVTI----------------QVFGFGQTVMTTSCRFMPANSEGSELAVTVETTQAMGSTL-----PF--ADTTVFPSEALLGE----SARIIMHLTYLDDDLRIMRNDADGQVFVYAR 296
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A7S2JMT5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2JMT5_9DINO) HSP 1 Score: 95.5 bits (236), Expect = 8.500e-18 Identity = 84/263 (31.94%), Postives = 119/263 (45.25%), Query Frame = 3
Query: 354 GAGTAEQERLAFTEKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPP-------FGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGTET---KLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRN 1112
G E E E+ A L+++LL +AA T RGQ R R ++ LE P + A S L G W LV+A+ED TR SPFFWA R+ G++ P FGG + A TD +P K+VG A Q + E+ ++V + FP+ S MTTT +A G + ++ V KTQV ++L + LD + F + LL + EV+M +YLD LRV R+
Sbjct: 73 GGEVGEAEAAGALERAAARSA-LQMELLELAAATARGQTGDEEVRRRCCRLVARLESANPTLEPARSALLEGDWRLVFATEDPTRCSPFFWALRQQMRGVEDPNPLSRLMFGG---------DDLLENTLAFTDGVPIKTVGLATQRLRHGELVNQVVV----------------GVFPTGESKMTTTCRY-EADGADAGVLRVIVEKTQVLGASLAASV-----LDQLSFPSGQLLGD----NAEVAMRVSYLDERLRVVRD 299
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: C1DZD4_MICCC (PAP_fibrillin domain-containing protein n=3 Tax=Micromonas TaxID=38832 RepID=C1DZD4_MICCC) HSP 1 Score: 94.7 bits (234), Expect = 3.060e-17 Identity = 85/267 (31.84%), Postives = 124/267 (46.44%), Query Frame = 3
Query: 393 EKDTPEVAQLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSV----GEAVQTIT--EKEIKSEVEI------FAGASAGSDKRGKEGPNTFPSFRSVMTTTSEIT---DAAGTETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSR--NEQGQVFVFAR 1142
+ D E ++L LL +AA + RGQ A+ + +ED+I ELE P E+ A + G WALVYAS +A RSSPFFW F+K G G +A +F T LP G QT++ +E+ SEVE+ FA AS G G + +T+ +T D AG + T+VR S +G + LD I T L++ + G+ E T TY+D +R+ R + Q+FV+ +
Sbjct: 121 DPDAEERSRLIRKLLGLAAASSRGQQASRDAKATMEDIITELEFMNPTEEPARK--INGEWALVYASVEAFRSSPFFWGFQKMLPG---------------GEDLASQLFKFTAGLPVAGTRGPFGVISQTVSLESEEMVSEVEMRIFDPFFAVAS------GVSG---------TVVSTANVTVKPDGAGDVLLVTPRTTRVRNSNVGGAI-----LDQIVVPTSELMSSVAGGAVEAEATVTYVDDAVRIVRVGKDLDQIFVYTK 350
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A813CNS8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CNS8_9DINO) HSP 1 Score: 92.8 bits (229), Expect = 5.780e-17 Identity = 81/244 (33.20%), Postives = 117/244 (47.95%), Query Frame = 3
Query: 417 QLKLDLLRIAALTGRGQLATPAERGRVEDVIWELEMRTPVEDTATSTALLGRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAG-TETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNE-QGQVFVFAR 1142
+++L LL AA T RGQ + A+R ++ +E P + T L G+W L++ASED TRSSPFFW +R+ EGI P F+ ++ +IFA TD +P K++GEA QT+ +I + V + + +VMTTT A +E L V TQ + L PL D + F ++ L + + TYLD LR+ RNE QVFV+ R
Sbjct: 84 EVRLRLLAAAASTCRGQCGSEADRQGALQLVKAMEALNPTPEP-TKGLLEGKWRLIFASEDVTRSSPFFWGWRRMLEGIPDP--SPLSRALFNTEELSESIFAFTDGIPLKNIGEATQTLYNGQIVNRVAV----------------EIWGLGTTVMTTTCRYMPAEDPSELLLTVETTQAVDNTL-----PL--ADQVVFPSETFLGD----NARLRARVTYLDEDLRIFRNELDDQVFVYVR 297
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A7S2ME77_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME77_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.640e-16 Identity = 72/213 (33.80%), Postives = 105/213 (49.30%), Query Frame = 3
Query: 579 LVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTIT---------EKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDAAGT-------ETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGS---TEVSM---TTTYLDGLLRVSRNEQGQVFVFAREDD 1151
LVYASE+ RSSPFFWAFR AT+ + P D S A IF ITD +P KS G+A QTI+ + E+ E+ +F + P +S+MTTT EI+ G + ++ V KT+V+ S++ +L F +DD+ F T+ + G EV++ T + G LRVS+ G F++ +EDD
Sbjct: 1 LVYASEEPYRSSPFFWAFRVATQDVTSPV--------IDPS-FAEAIFKITDGIPFKSTGQARQTISGSGSPCGSLKSEVTLEISLF--------------DSVLPRTKSIMTTTCEISPKPGVSADVISHDLEVTVLKTEVKDSSISKLPGLSF-VDDLSFPTELAIAAFSFGQGAGAEVTVDMQTELFSGGGLRVSKAPDGNFFIWTKEDD 189
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Match: A0A7S2LK96_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LK96_9DINO) HSP 1 Score: 86.3 bits (212), Expect = 5.880e-16 Identity = 75/207 (36.23%), Postives = 96/207 (46.38%), Query Frame = 3
Query: 567 GRWALVYASEDATRSSPFFWAFRKATEGIKPPFGGGGDGDGFDGSTVAGTIFAITDSLPGKSVGEAVQTITEKEIKSEVEIFAGASAGSDKRGKEGPNTFPSFRSVMTTTSEITDA----------------AGTETKLRVAKTQVRKSALGRLLKPLFNLDDIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNE-QGQVFVF 1136
G W LVY SED TRSSPFFWAFR+A EG A +IFA+TD LP K++GEA QTI + + V + + R+VMTTTS I + G++ L V TQ A+G L P + D+ F ++ +L GS V+M TYLD LRV RN G+ FVF
Sbjct: 1 GEWRLVYGSEDVTRSSPFFWAFRRAFEGR------------------ADSIFAVTDGLPAKTIGEASQTIEGGRLVNRVAV----------------EVYGVGRTVMTTTSRIEEPDVRAEQGEDGAPLDAEGGSDLALTVETTQ----AVGNRL-PF--VPDVVFPSEAVLG----GSARVTMRVTYLDDDLRVVRNAGDGRRFVF 162 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig8.17032.1 >prot_Ecto-sp6_S_contig8.17032.1 ID=prot_Ecto-sp6_S_contig8.17032.1|Name=mRNA_Ecto-sp6_S_contig8.17032.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=359bp MGVSRRCSALAAFVALAAVSSECQAFINCFLRAGERTPPSAATTSMTSFRback to top mRNA from alignment at Ecto-sp6_S_contig8:969485..975311- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig8.17032.1 ID=mRNA_Ecto-sp6_S_contig8.17032.1|Name=mRNA_Ecto-sp6_S_contig8.17032.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5827bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:969485..975311- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig8:969485..975311- >mRNA_Ecto-sp6_S_contig8.17032.1 ID=mRNA_Ecto-sp6_S_contig8.17032.1|Name=mRNA_Ecto-sp6_S_contig8.17032.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:969485..975311- (Ectocarpus species6 EcLAC_371)back to top |