mRNA_Ecto-sp6_S_contig8.17027.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI) HSP 1 Score: 1130 bits (2924), Expect = 0.000e+0 Identity = 661/699 (94.56%), Postives = 665/699 (95.14%), Query Frame = 1
Query: 1 MTRVRGDDELLELLGIMGGDNGEQDATTPAETSRDTRTHPALAAGEFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQEDXXXXXXXXXXXXXARHAGGTKGEGGKSGLSSSSGQGLREQGGRGEGLIDDGGIGARGPSDDXXXXXXXXXXXRDFTETSYSTNKVTAKRQLNEAGKAAEGKAREIVNAGNKKPASVGSGGSXXXXXXXXXXXXXXXXXXPLAKXXXXXXXXXXXXXXXXXXXXXXXXXSAGGREPGEHSRPLFDEDGNAAAGRRGGAAVVGGETSESVGLAEDLDPDRQAKRELS 2097
MTRVRGDDELLELLGIMGGDNGEQDATTPAETSRDTRTHPA AAGEFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQ VLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAP+KRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAA RQSSSTEHP PAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLS HIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQE XXXXXXXXX T+GEGGKSGLSSSSGQGLREQGG GEGLIDDGGIGA GPSDDXXXXXXXXXXXRDFTETSYST+KVTAKRQLNEAGKAAEGKAR +VNAGNKKPASVGSG XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX G REPGEHSRPLFDEDGNAAAGRRGGAAVVGGETSESVGLAEDLDPDRQAKRELS
Sbjct: 1 MTRVRGDDELLELLGIMGGDNGEQDATTPAETSRDTRTHPAPAAGEFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQ-------VLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPSKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAARRQSSSTEHPPPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQEGDGSGXXXXXXXXX------TRGEGGKSGLSSSSGQGLREQGGGGEGLIDDGGIGASGPSDDXXXXXXXXXXXRDFTETSYSTSKVTAKRQLNEAGKAAEGKARGVVNAGNKKPASVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-REPGEHSRPLFDEDGNAAAGRRGGAAVVGGETSESVGLAEDLDPDRQAKRELS 685
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A6H5LQ06_9PHAE (PCIF1_WW domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ06_9PHAE) HSP 1 Score: 558 bits (1439), Expect = 5.780e-186 Identity = 317/495 (64.04%), Postives = 323/495 (65.25%), Query Frame = 1
Query: 1 MTRVRGDDELLELLGIMGGDNGEQDATTPAETSRDTRTHPALAAGEFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRA-------------------------------------------------------------------------------------------------------VLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAG--------------SFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQAT 1134
MTRVRGD+ELLELLGIMGGDNGEQDA TPAETSRDTRTHPA AAGEFACVPETGWNSSIWNPHVFEPAAA T FGVASRTGEG+RRVVSPQEEVLRQQAVAIVFSRFQARRK R VLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQ+ A S P LRMNSAHYDKMKELFSRSRVEGAA QSSSTEHP PAWIGDFHDCLFSCLMRYEALQ ASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFG G SF PT+GAY+ANPPFVRDVILKMA HMDGLLQ +
Sbjct: 1 MTRVRGDNELLELLGIMGGDNGEQDAKTPAETSRDTRTHPAPAAGEFACVPETGWNSSIWNPHVFEPAAAATGFGVASRTGEGVRRVVSPQEEVLRQQAVAIVFSRFQARRKTRGACDSCLLPATPTAVAGGLFRLLRELGGQGGGAKDREIPGNPCVVLRAQGLMIYASLCNAHNGRGTLAFQTPRPSSGSLTPAVTAVAFVPPEHGVLPHASPAMQVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQV---------AASMPVWL-------------------LRMNSAHYDKMKELFSRSRVEGAARWQSSSTEHPPPAWIGDFHDCLFSCLMRYEALQ-----ASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGRCGRNAFPTACWKQQCVSFLLSPPTEGAYQANPPFVRDVILKMATHMDGLLQTS 462
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A835YQ92_9STRA (Phosphorylated CTD interacting factor 1 WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ92_9STRA) HSP 1 Score: 359 bits (922), Expect = 1.830e-109 Identity = 224/499 (44.89%), Postives = 288/499 (57.72%), Query Frame = 1
Query: 7 RVRGDDELLELLGIMGGDNGEQDATTPAETSRDTRTH-PALA-AGEF---ACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGIRVKNEMFERWQFSRKLKEGR------GGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVA-ARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKA---LTFVVIIPCWEDSAGWKRLRDSAFLSTH-IKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQS-----------PETLGQACRELERAFALRQED 1422
R+RGDDEL LL M GD TP S D + P L AGE PE GWN ++WN V +P A +A+ + + +PQ E LRQQA+ ++ +RF A L ELG+RVKN++FE+WQF +K +E G DP+LP +F D L A L+A G AQ+ ELGRA+++AL+ KQLR + P++R A A ++D +TY + G+++LR+NSAHYDK++ L + A ++ FHD LF+ L+RYE+L GGGFQA+ GD FDVLL+RFGA MECFASP N RY+R+C+AFPDTD PFG A SFFDF+P G+YEANPPFV V+ M HM+ LL+A A A L F VI+P WE A W+RL S + L Q+DHGYCEG+Q LRR RY++AS TSVFFLQT A P T AC EL AF RQ D
Sbjct: 4 RLRGDDELDMLLASMEGDE------TPTNQSDDGGSAAPTLGVAGEQHTQRAEPERGWNKAVWNAGVCKPEDA-----IAAAMPDRVAMQTTPQVECLRQQALTVLRARF-------AALTTELGVRVKNDVFEKWQFGQKARERATDGALPGDDPLLPRGAFRDGTLVAALEAAGADGAQAHVAVRELGRAARAALQVFNKQLRTL---------PPSRRHATAARVDADTYCVSYGRHRLRVNSAHYDKLRALHAAHGSSSAQRQRXXXXXXXGARAAAPFHDALFALLLRYESLAGGGFQAAAPGDVFDVLLRRFGADMECFASPLNARYARHCTAFPDTDAPFGGACSFFDFRPASGSYEANPPFVPAVMDMMTEHMNALLRAAAAAGAALMFTVIVPAWEHEASWRRLARSPHAQRRRLLLAQRDHGYCEGRQQLRRTRYKIASAPTSVFFLQTPAAAAXXXXXXXXXXXAKWPVTEA-ACDELREAFRPRQAD 474
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A6H5L6S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S0_9PHAE) HSP 1 Score: 294 bits (752), Expect = 9.730e-88 Identity = 246/384 (64.06%), Postives = 253/384 (65.89%), Query Frame = 1
Query: 1135 AKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQEDXXXXXXXXXXXXXARHAGGTKGEGGKSGLSSSSGQGLREQGGRGEGLIDDGGIGARGPSDDXXXXXXXXXXXRDFTETSYSTNKVTAKRQLNEAGKAAEGKAREIVNAGNKKPASVGSGGSXXXXXXXXXXXXXXXXXXPLAKXXXXXXXXXXXXXXXXXXXXXXXXXSAGGREPGEHSRPLFDEDGNAAAGRRGGAAVVGGETSESVGLAEDLDPDRQAKRELSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLFSENGTRKGEAEGTA 2286
AKALTFVVIIPCWEDSAGWKRLRDSAFLS HIKL QKDHGYCEGKQHLRRNRYRLASFHTSVFFLQT+ ARRQQSPETLGQACRELERAFALRQED XXXXXXXXXX GGIG XXXXXXXXXX RDFTETS ST+KVTAKRQL+EAGKA EGKAR +VNAGNK PASVGSG PL K SAGGREPGEHSRPL DEDG+AAAG RGGAA G S+GLAEDL PDRQAKREL XXXXXXXXXXXXXXXXXXXXXXXXXXXX T L SENGT+KGEAEGTA
Sbjct: 6 AKALTFVVIIPCWEDSAGWKRLRDSAFLSKHIKLHQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTEPARRQQSPETLGQACRELERAFALRQEDASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXGGIGVXXXXXXXXXXXXXXXXGRDFTETSSSTSKVTAKRQLDEAGKATEGKARGVVNAGNKNPASVGSG------------VGDFGAATPLPKAENNKKRAKGKRRRNSGDEAGRSAPSAGGREPGEHSRPLLDEDGSAAAGCRGGAAGGG-----SIGLAEDLGPDRQAKRELPSSVKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPAVAQAGEG--TRLLSENGTQKGEAEGTA 363
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.250e-79 Identity = 168/441 (38.10%), Postives = 239/441 (54.20%), Query Frame = 1
Query: 37 LLGIMGGDNGEQDATTPAETSRDTRTHPALAAGEFACVPETGWNSSIWNPHV---FEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGI-RVKNEMFERWQFSRKLKEGRGGDPILP-AESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVA 1344
+L M G T E+ T + + T SSIWNPH + AA + A V+P E+ RQQ V + S+ + +LGI ++ N ++E WQF+ +L + DP++P AES + GL EL+ G K+ + C EL + S+ L+ +Q A K+V ++ +T L GK+ +++++AH+ K++EL++R R G + + F LF L+RY++L GGGFQA++ + FDVLLK F +MECFASP NCRYSR+CSAF DTD FGS GSFFDF P G +EANPPF+ VI +MA+HM LL A L F++IIP W+ + GW++L S F H+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q +A
Sbjct: 4 ILASMAAATGNASPLTKTESVATTVAFSKSVSKKRDRGTSTSSLSSIWNPHEEMSLDSAALNKLIDAAKSC------TVNPAMEIARQQIVRALCSKVRC-------ASADLGIGKLPNSIYETWQFTSQLTV-KEHDPLIPHAESDYS-GLFEELRKAGATKSGATKKCKELTKESERMLRKFGQQ----------DFVAGKKKVQVAVMEDDTRHLTYGKSMVKLSAAHFAKLRELYARKRGLDDDGSSMAPKDQRQ------FESALFCLLLRYDSLSGGGFQAALNEECFDVLLKEFNCKMECFASPLNCRYSRFCSAFLDTDFVFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLTAADGPLAFIIIIPTWQKTEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAMA 413
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A3R7HJ33_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HJ33_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.550e-79 Identity = 173/457 (37.86%), Postives = 250/457 (54.70%), Query Frame = 1
Query: 61 NGEQDATTPAETSRDTRTHPALAAGEFAC-VPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLR-RVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGI-RVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQED 1422
NG TT +E + + P+ E P + S IWNP V P + V R E + ++P E+ RQQ V + ++ + ++LGI ++ N +E WQF+ KL DP++P GL EL+ G K+ + C EL R S+ L+ +Q V+ K V + + L G + +++++AH+ K++E+++R + +G SS P +F LF L+RY++L GGGFQA++ + FDVLLK F A+MECFASP N RYSR+CSAF DTD FGS GSFFDF P G +EANPPF+ VI +MA+HM LL A L F+VIIP W+++ GW++L S + H+++ QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A + P T +A L++AF +Q D
Sbjct: 7 NGSPTPTTTSEYAAKSTVKPSGKKREREEETPSSSPPSGIWNPQVEMPLDS----AVLRRLQEAAQSHTINPAMEITRQQTVRTLCNKIRK-------ASEDLGIGKLPNSAYETWQFTSKLTVSEH-DPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFSQQNF---------VAGKKKHVHVAIAEDGMHQLTYGNSVVKLSAAHFAKLREMYARK--QDFSGNGSSMV----PKARHEFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKYFDAKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRYNQIHLRIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKAC-SKWPVT-EKALESLKQAFKSKQAD 434
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA) HSP 1 Score: 274 bits (701), Expect = 2.950e-79 Identity = 167/451 (37.03%), Postives = 243/451 (53.88%), Query Frame = 1
Query: 22 DELLELLGIMGGDNGEQDATTPAETSRDTRTHPALAAG---------EFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGI-RVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVA 1344
D L ++L M G A PA + T++ A +A E + P +G IWNP P A+ + + T R V+P E+ RQQ V + ++ + ++LGI ++ N +E WQF+ +L + DP++P GL EL+ G K+ + C EL R S+ L+ +Q V+ K+V ++ L G + +++++ H+ K++E+F+R + G G + + F LF L+RY++L GGGFQA++ + FDVLLK F +MECFASP NCRYSR+CSAF DTD FGS GSFFDF P G +EANPPF+ VI +MA+HM LL A L F+VIIP W+++ GW++L S F H+ + QK HGYCEGKQ +R+ R+R+ASF TS+FF Q A
Sbjct: 16 DPLEDILASMAAATGN--APRPASAA-PTKSASAASASIPTAKKRERELSSTPPSG----IWNPQEEMPLASSALRELEDATRN---RAVNPAMEIARQQTVRALCNKIRR-------ASEDLGIGKLPNSAYETWQFTSQLTV-KEHDPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFGQQ---------DFVAGKKKKVQVAVMEDGMRQLTYGHSTVKLSADHFAKLREMFARKQGLGDDGSNMAPKDQRQ------FESALFCLLLRYDSLDGGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSLFFWQNSKA 433
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA) HSP 1 Score: 273 bits (699), Expect = 6.040e-79 Identity = 162/395 (41.01%), Postives = 227/395 (57.47%), Query Frame = 1
Query: 169 SSIWNPH--VFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGI-RVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVA 1344
S IWNP + AAA A+R R V+P E+ RQQ V + ++ + ++LGI ++ N +E WQF+ +L + DP++P GL EL+ G K+ + C EL R S+ L+ +Q V+ K+V + + L G + +++++AH+ K++E+++R G +G SS T P F LF L+RY++L GGGFQA++ + FDVLLK F +MECFASP NCRYSR+CSAF DTD FGS GSFFDF P G +EANPPF+ VI +MA+HM LL A L F+VIIP W+D+ GW++L S + TH+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A
Sbjct: 58 SGIWNPQQQMLLDAAALRQLEDAARA-----RSVNPAMEIARQQTVRALCNKIRR-------ASEDLGIGKLPNAAYETWQFTSQLTV-KELDPLIPHAGSDYSGLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQ---------DFVAGKKKKVHVAAAEDDVRQLSYGNSTVKLSAAHFAKLREMYARKL--GMSGDGSSMT----PKHQRSFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKA 424
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A024TWC3_9STRA (PCIF1_WW domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWC3_9STRA) HSP 1 Score: 268 bits (686), Expect = 2.380e-77 Identity = 186/474 (39.24%), Postives = 258/474 (54.43%), Query Frame = 1
Query: 22 DELLELLGIMGGDNGEQDATTPAETSRDTRTHPALAAGEFACVPETGWNSS--IWNPHVFEPAAAPTVFGVASRTGEGLR----RVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGI-RVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQED 1422
D++ +L M G A + E + R+ PA + V + G +++ IWN HV V VAS + +R + VSP E+ RQ+ V + + K+ A + +LG+ ++ N +E WQF KL GDP++P GL EL A+G ++ + +C + + + ++L + G KR R D + Y++ G LR+N H DK++ LF R + AG S+S F D LF L+RYE+L GGGFQA++ + FDVLL+ F MECFASPFN RY R+CSAF DTD FGS GSFFDF+PT G +EANPPFV +I KMA HM LQ T+K+L F+VIIP WE + GW+ L+ S++ ++ L QK HGYCEGKQ +R RYR+ASF TSVFF Q A + P T +A +L RAF +Q D
Sbjct: 3 DDVEAILNSMAAKTGNVSAISVDEPTL-ARSKPAPKK-RMSAVVDGGDHATTAIWNEHV-----QVDVRHVAS-SEHNMRPCNLQSVSPAYELHRQKCV------LKLKAKLHATVD-QLGLPKLPNSAYETWQFCSKLA-APDGDPLIPHADSDYAGLRDELVAIGANRHAANKICRAMTQEAHRVGQSLLRMTHG----------GGKKRATIRPNDDH-YLVSYGGTSLRINKTHLDKLETLFGRHHAQ--AGATSAS----------QFPDFLFCLLLRYESLDGGGFQAALNEECFDVLLRHFKCNMECFASPFNSRYGRFCSAFLDTDRVFGSFGSFFDFRPTFGCFEANPPFVPALIAKMAAHMTTCLQNTSKSLCFIVIIPAWEHTEGWQLLKHSSYNKEYLVLSQKHHGYCEGKQQMRPTRYRIASFDTSVFFWQNAKAAARW-PVT-ERAIEDLRRAFKSKQAD 435
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Match: A0A6A4A4B0_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4A4B0_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.540e-77 Identity = 162/395 (41.01%), Postives = 227/395 (57.47%), Query Frame = 1
Query: 169 SSIWNPH--VFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQARRKMRAVLGKELGI-RVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPTKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAAGRQSSSTEHPSPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSTHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVA 1344
S IWNP + AAA A+R R V+P E+ RQQ V + ++ + ++LGI ++ N +E WQF+ +L + DP++P GL EL+ G K+ + C EL R S+ L+ +Q V+ K+V + + L G + +++++AH+ K++E+++R G +G SS T P F LF L+RY++L GGGFQA++ + FDVLLK F +MECFASP NCRYSR+CSAF DTD FGS GSFFDF P G +EANPPF+ VI +MA+HM LL A L F+VIIP W+D+ GW++L S + TH+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A
Sbjct: 58 SGIWNPQQQMLLDAAALRQLEDAARA-----RSVNPAMEIARQQTVRALCNKIRR-------ASEDLGIGKLPNAAYETWQFTSQLTV-KELDPLIPHAGSDYSGLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQ---------DFVAGKKKKVHVAAAEDDVRQLSYGNSTVKLSAAHFAKLREMYARKL--GMSGDGSSMT----PKHQRSFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKA 424 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig8.17027.1 >prot_Ecto-sp6_S_contig8.17027.1 ID=prot_Ecto-sp6_S_contig8.17027.1|Name=mRNA_Ecto-sp6_S_contig8.17027.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=788bp MTRVRGDDELLELLGIMGGDNGEQDATTPAETSRDTRTHPALAAGEFACVback to top mRNA from alignment at Ecto-sp6_S_contig8:912679..920446+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig8.17027.1 ID=mRNA_Ecto-sp6_S_contig8.17027.1|Name=mRNA_Ecto-sp6_S_contig8.17027.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7768bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:912679..920446+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig8:912679..920446+ >mRNA_Ecto-sp6_S_contig8.17027.1 ID=mRNA_Ecto-sp6_S_contig8.17027.1|Name=mRNA_Ecto-sp6_S_contig8.17027.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2364bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:912679..920446+ (Ectocarpus species6 EcLAC_371)back to top |