mRNA_Ecto-sp6_S_contig8.16974.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI) HSP 1 Score: 578 bits (1489), Expect = 1.120e-196 Identity = 345/580 (59.48%), Postives = 403/580 (69.48%), Query Frame = 1
Query: 1 EGLERVLVVADDVWEVEVLQELQKVGACILYTARQDTLVPEAPLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQ--EGGRELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLK---VAEEAAATLERWSILTREDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWDKLARDQG-VVAPRPYDGGLDAMDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETTDTSVS-----TLCALSYCASQLERWEEAEEFRRHASAILDGMEGDSGDETKNHQEQDRDTGI-CPWL-CF---GSDDALDDMVEGRANKRSTWCVADSATERVFIHDVSRNKYVVVGMGGAMVRMSIRLDSPVLRTLPQGTVVVVDQIRGRRAHVVKPMDGWASVSTENGYRILES-IGRPTKYKVVYREGIWVRSSQDIDEGRMVRIAPFGTVLKATGKTEIFDAVERVEVEDGWVSMRMRKDMGSGVPFLEPLD 1689
EG ERVLVVADDV E EVLQEL+ GA +MVLRRA DLDE+AVLPDA YELM RCE+V LDIAFVGRW VVRGR K AWQ AL RIL+AQ EG L WRA++LRAGLEELA +NP KELYLALA +P F SEVAAALL+D+ L EDL+ VAEE AATLERWSIL R GGNYRVH++HS+FI+ CLS NK +DRVL RWRRYISS RALL + LV IWD LA DQ V+ PRPYD L+AMD+ SAELP AL A F+ +R+D +GA +++SKLL+LQETT TS TL +L A RWEEAE +R A AIL M G E N + ++ + P+L CF +DDA+ D V+GR +S V DSA+ERVFI SRNKYVVVG+ GA VR+S RLDSPVLRTLP+GTVV V QIR RRAH+VKP+DGWAS+ST + YRILE I + TKYKV+Y EGI+VR + E R+ RIAPFGTVLKATG+TEI+DAVER+EVEDGWVSMR+R D +G P L PLD
Sbjct: 5 EGRERVLVVADDVREAEVLQELKTEGA----------------------------DMVLRRAADLDESAVLPDAGYELMRRCEFVVLDIAFVGRWGVVRGRRKEKAWQMALDRILEAQAGGEGVGPLSWRASVLRAGLEELAVDNPLNKELYLALAVLPMGLTFPSEVAAALLYDDALSGEDLEDLEVAEEVAATLERWSILIRMGGGNYRVHDEHSDFIRGCLSTNKDTQDRVLRRWRRYISSVRALLACEPEDLVKIWDSLASDQDDVIDPRPYDRALEAMDMPSAELPRALHLAGFFYMVREDGEGACSTFSKLLKLQETTVTSDGLIVWETLRSLHLSAYMSGRWEEAEVTQRRADAILKEM----GKEPVNFVDFWLESLLENPFLSCFFPCATDDAVGDSVDGR---KSRSFVDDSASERVFIPKASRNKYVVVGLVGATVRVSKRLDSPVLRTLPKGTVVEVAQIRSRRAHIVKPIDGWASLSTVSSYRILEPPITQSTKYKVIYPEGIFVRRMVSL-ESRIARIAPFGTVLKATGRTEIYDAVERIEVEDGWVSMRLRND--TGAPLLSPLD 546
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 292 bits (747), Expect = 8.210e-85 Identity = 175/360 (48.61%), Postives = 220/360 (61.11%), Query Frame = 1
Query: 4 GLERVLVVADDVWEVEVLQELQKVGACILYTARQDTLVPEAPLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQ---EGGRELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLKVAEEAAATLERWSILT-REDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWDKLARDQGVVAPR-PYDGGLDA-MDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETT-----DTSVSTLCALSYCASQLERWEEAEEFRRHASA 1050
G R LVVADDVW+ EVL EL++ GA ++YT R+ L P P +R+ E++ EEAEM+LRRA DL E A LP AAYELM+RC++ LD+A VGRW +R R AW+ AL I++ Q+ +GG+ L WRAA+LRAGL LA +NPQT ELY ALA +P AF EVA LL+ + LK AE TLER SILT E+ G Y VH H +F+ A RD LPRWRRYISS RAL TY L +W+KL++ +G R PY+ L+A MD S EL EAL AA FH+ R+DW AF YS LL ++E T L L CA ++ R +E E + R A A
Sbjct: 143 GDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 293 bits (751), Expect = 9.160e-84 Identity = 176/360 (48.89%), Postives = 219/360 (60.83%), Query Frame = 1
Query: 4 GLERVLVVADDVWEVEVLQELQKVGACILYTARQDTLVPEAPLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQ---EGGRELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLKVAEEAAATLERWSILT-REDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWDKLARDQGVVAPR-PYDGGLDA-MDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETT-----DTSVSTLCALSYCASQLERWEEAEEFRRHASA 1050
G R LVVADDVW+ EVL EL++ GA ++YT R+ L PE P +R+ E++ EEAEM+LRRA DL E LP AAYELM RC++ LD+A VGRW +RGR AW+ AL I++ Q+ +GG+ L WRAA+LRAGL LA +NPQT ELY ALA +P AF EVA LL+ + LK AE TLER SILT E+ G Y VH H +F+ A RD LPRWR+YISS RAL TY L +W+KLA+ +G R PY+ L A MD S EL EAL AA FH+ R DW AF YS+LL ++E T L L CA ++ R +E E + R A A
Sbjct: 309 GDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: D7FVU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU8_ECTSI) HSP 1 Score: 270 bits (691), Expect = 1.920e-82 Identity = 137/199 (68.84%), Postives = 159/199 (79.90%), Query Frame = 1
Query: 1120 GICPWLCFGSDDALDDMVEGRAN---------KRSTWCVADSATERVFIHDVSRNKYVVVGMGGAMVRMSIRLDSPVLRTLPQGTVVVVDQIRGRRAHVVKPMDGWASVSTENGYRILESIGRPTKYKVVYREGIWVRSSQDIDEGRMVRIAPFGTVLKATGKTEIFDAVERVEVEDGWVSMRMRKDMGSGVPFLEPLD 1689
G+C C DD D +V+ +N + + WCV DSATERVF+ D SRNKY VVG+GGA VRM+ RLDSPVLRTLPQGTVVVV Q+R RRAH++KPMDGWAS+STE+GY ILE+I RPTKYKVVYREGI+VRSS I++GR+VRIAP GTVLKATGKTEIFDAVERVEVEDGWVSMR+R+D GSG P L L+
Sbjct: 7 GLC--FCVEGDDKEDALVDNDSNNPYQHEHSKRHAKWCVDDSATERVFVPDASRNKYQVVGLGGATVRMTARLDSPVLRTLPQGTVVVVAQVRSRRAHIIKPMDGWASLSTESGYVILEAIARPTKYKVVYREGIFVRSSPSIEDGRIVRIAPCGTVLKATGKTEIFDAVERVEVEDGWVSMRLREDKGSGAPLLMALN 203
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 290 bits (742), Expect = 3.640e-82 Identity = 170/361 (47.09%), Postives = 223/361 (61.77%), Query Frame = 1
Query: 1 EGLERVLVVADDVWEVEVLQELQKVGACILYTARQDTLVPEAPLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQEGG--RELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLKVAEEAAATLERWSILTREDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWDKLARDQGV-VAPRPYDGGLDAMDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETTDTSVSTLCA------LSYCASQLERWEEAEEFRRHASAIL 1056
E R LVVADD+ E EVL+EL+ G +LYT+R+D L+ APL+R+ + EE MVLRRA L + A LP AA+ELM+RCEY A+ +AF GRW VVRG+ AW+ ALG I +AQ+ GG R L WR A+LR G +EL ++ TKELYL+LA +PK AF S+VAA LL+ + A++L+ A +A TLER SILT E G YRVH H++F++ C AN R+ L RWR Y S RAL TY LV IWD +A+ +G PYD LD +D SS +L +AL+ AA FHW R+D A+T +L ++ET S+L L C + R EEAE+ + A I
Sbjct: 254 ESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTIF 614
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 276 bits (705), Expect = 2.980e-76 Identity = 169/350 (48.29%), Postives = 218/350 (62.29%), Query Frame = 1
Query: 13 RVLVVADDVWEVEVLQELQKVGAC-ILYTARQDTLVPEAPLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQ--EGGRELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLKVAEEAA---ATLERWSILTREDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWDKLARDQGVVAP-RPYDGGLDAMDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETT---DTSV--STLCALSYCASQLERWEEAE 1026
R LVVADDVW+ EVL EL++ +LYT+R L+P AP+V + ++ EEAEMVLR A +L + A LP+AAY+LM RCEY ALD+ FVGRW R R +AW+ AL I+ AQ EG L WRAA+L GLEELA EN +ELYLALA +P+ F +VAA LL+ + E+ + EEA TLERWSI+TR GG YRVH++H++FI+A +AN+ R+ L RWRRY+SS AL+T +D L W+ LA QG P +PY L + SSA+ P AL AA F+ R+ W A +S+LL +QE T D+ V TL L C R EEAE
Sbjct: 161 RFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRGEGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGVDSVVVARTLHELGLCVYMSGRAEEAE 510
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 224 bits (571), Expect = 1.150e-57 Identity = 147/369 (39.84%), Postives = 209/369 (56.64%), Query Frame = 1
Query: 4 GLERVLVVADDVWEVEVLQELQKVGACILYTAR--QDTLVPE--APLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQ--EGGRELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLKVAEEAAATLERWSILTREDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWDKL--------ARDQGVVAPRPYDGGLDAMDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETT-----DTSVSTLCALSYCASQLERWEEAEEFRRHASAI 1053
G +LVVADDVWE EVL EL+ GA ILYT R +D L + ++R+ E+ EAE +LRRA L + + LPDAA++++ R VA+D+A+VGRW +VRG+ AW L ++ AQ +G L WR+A+LR G+ L + TKELYL+L +P++ +FS + AL+ D + AE+L+ A A ATLE+WS+L R +GG YRVH+ H++ +S + + L RWR +S+A A+LT+ + LV IW+ + A D G +PY +DAMD+S A + L A F WL + A S+SKLL E + D V T+ L A R EAE + R AI
Sbjct: 407 GFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSDGS--AEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIG----QPYAETVDAMDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAANHPDVHV-TMYTLGAHALISGRTPEAEGWFRRTLAI 768
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 218 bits (556), Expect = 9.830e-56 Identity = 141/364 (38.74%), Postives = 202/364 (55.49%), Query Frame = 1
Query: 4 GLERVLVVADDVWEVEVLQELQKVGACILYTAR--QDTLVPE--APLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQ--EGGRELLWRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFDETLCAEDLKVAEEAAATLERWSILTREDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYPDDALVTIWD---KLARDQGVVA-PRPYDGGLDAMDISSAELPEALEAAAGFHWLRQDWQGAFTSYSKLLELQETTDTSVSTLCALSYC----ASQLERWEEAEEFRRHASAI 1053
G +LVVADD+WE EVL EL+ GA ILYT R +D L + ++R+ E+ EAE +LRRA DL + LPDAA++++ R VA+D+A+VGRW +VRG AW L ++ AQ +G L WR+A+LR GL L + TKELYL+L +P++ +FS AL+ D + AE+L+ A A TLE+WS+L R +GG YRVH+ H++ +S + L RWR +S+A A+L + + LV IW L +G +PY +DAM++S A + L A F W+ + A S+SKLL E + + + A+ Y A R EAE + R AI
Sbjct: 452 GFGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALVSDGS--AEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAANDPDVHAIMYTLGAHALVSGRTHEAEGWFRRTLAI 813
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: D7FVU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU7_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.170e-47 Identity = 84/146 (57.53%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1249 SRNKYVVVGMGGAMVRMSIRLDSPVLRTLPQGTVVVVDQIRGRRAHVVKPMDGWASVSTENGYRILESIGRPTKYKVVYREGIWVRSSQDIDEGRMVRIAPFGTVLKATGKTEIFDAVERVEVEDGWVSMRMRKDMGSGVPFLEPL 1686
+R+K+VVVG+ GA VR +RLDSP+LRTL +GTVV V ++R RRAH+VKP++GWAS+STE+GY I+E R ++YKVVY +GI VRS+ I+ G +V+I G +LKATGKT+I D VERV+++ GWVSMR+R+D G G L P+
Sbjct: 4 NRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVNGWASLSTEDGYGIIEPTKRCSRYKVVYNDGIIVRSTAKIETGEVVKIVHPGDILKATGKTQILDGVERVQIDSGWVSMRLREDNGVGARLLAPM 149
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.500e-46 Identity = 128/344 (37.21%), Postives = 183/344 (53.20%), Query Frame = 1
Query: 13 RVLVVADDVWEVEVLQELQKVGACILYTARQDTLV---------------PEAPLVRIVEMVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRGRCKGMAWQTALGRILKAQQEGGRELL---WRAAILRAGLEELAYENPQTKELYLALAAVPKDFAFSSEVAAALLFD------ETLCAE----DLKVAEEAAATLERWSILTREDGGNYRVHNQHSEFIQACLSANKGVRDRVLPRWRRYISSARALLTYP-DDALVTIWDKLARDQGVVAPRP-YDGGLDAMDISSAELPEA-LEAAAGFHWLRQDWQGAFTSYSKLLELQET 951
R L+VADDV+E EVL+ELQ +GA +LYT + A ++R+ + E E VLRRA LD A LP A +L++ V +D+A++GRW VVRG AW+ AL + +GG+E W A+L AG+ +LA N + K+LYL+LA +PK +F+ AAALLF T A+ DL E LER S+L E+GG Y +H H++F++ +S R R L RWR + S+ AL +P +D++ W L+ D V +P P YD LD MD S A+ A LE A L + +GA Y++L+ + E+
Sbjct: 408 RYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFLEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTES 751 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.16974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig8.16974.1 >prot_Ecto-sp6_S_contig8.16974.1 ID=prot_Ecto-sp6_S_contig8.16974.1|Name=mRNA_Ecto-sp6_S_contig8.16974.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=515bp MVVEEAEMVLRRAGDLDETAVLPDAAYELMERCEYVALDIAFVGRWRVVRback to top mRNA from alignment at Ecto-sp6_S_contig8:324869..329896+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig8.16974.1 ID=mRNA_Ecto-sp6_S_contig8.16974.1|Name=mRNA_Ecto-sp6_S_contig8.16974.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5028bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:324869..329896+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig8:324869..329896+ >mRNA_Ecto-sp6_S_contig8.16974.1 ID=mRNA_Ecto-sp6_S_contig8.16974.1|Name=mRNA_Ecto-sp6_S_contig8.16974.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1545bp|location=Sequence derived from alignment at Ecto-sp6_S_contig8:324869..329896+ (Ectocarpus species6 EcLAC_371)back to top |