mRNA_Ecto-sp6_S_contig111.1507.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI) HSP 1 Score: 337 bits (865), Expect = 2.180e-115 Identity = 169/181 (93.37%), Postives = 171/181 (94.48%), Query Frame = 2
Query: 89 RGAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRDLKKFYNPVWDSFVEGQPGD*LPSGSQDEDAIEYLLNGVYHTTSNTGNEENPIELEERRGGEGGDSEDESGEPSPG 631
R +GLTDAKLLKHLQN+CIVYACL VKRNAGIVSTQAKHAAAAKGYKDIAV GFFKWLKENLEADQYFSQPWLTFEVM TSMSGDAVLFT GKKLWKRFDN MR LKKFYNPVWDSFVEGQPGD LPSGSQDEDAIEYLLNGVYHT SNTGNEENPIELEERRGGEGGDSEDESGEPSPG
Sbjct: 31 RSSGLTDAKLLKHLQNVCIVYACLTVKRNAGIVSTQAKHAAAAKGYKDIAVLGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSGDAVLFTHGKKLWKRFDNIMRALKKFYNPVWDSFVEGQPGDQLPSGSQDEDAIEYLLNGVYHTISNTGNEENPIELEERRGGEGGDSEDESGEPSPG 211
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5JJR6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR6_9PHAE) HSP 1 Score: 200 bits (508), Expect = 3.010e-62 Identity = 106/153 (69.28%), Postives = 109/153 (71.24%), Query Frame = 2
Query: 89 RGAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRDLKKFYNPVWDSFVEGQPGD*LPSGSQDEDAIEYLLNGVYHTTSNTGN 547
R +GLTD KLLKHLQN+CIVYACLAVKRNAGIVSTQAKHAA AKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVM TSMSG GQPGD LPSGSQDEDAIEYLL+GVYH S TGN
Sbjct: 31 RSSGLTDTKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAVAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSG-----------------------------------GQPGDQLPSGSQDEDAIEYLLHGVYHMESGTGN 148
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 176 bits (446), Expect = 2.510e-52 Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 2
Query: 92 GAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRDLKKFYNPVWDSFVE 448
G GL+ KLLKHLQN+CIVYACLAVKRNAGIVST+AK+ AAAKGYKDIAVPGFFKWLKEN Q WLTFEVM TS++G VLFTDGKKLWKRFD MR++KK YN VWD V+
Sbjct: 30 GKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKEN---GIVIKQAWLTFEVMGRTSLNGAPVLFTDGKKLWKRFDKVMREMKKTYNKVWDRCVD 145
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE) HSP 1 Score: 170 bits (430), Expect = 2.490e-46 Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 2
Query: 89 RGAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRDL 409
R +GLTDAKLLKHLQN IVYACLAVKRNAGIVSTQAKHAAAA+GYKDIAVP FFKWL+ENL+ + F QPWLTFEVM TSM G AVLFT+G+K+WKRFD +R++
Sbjct: 426 RSSGLTDAKLLKHLQNGRIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPSFFKWLQENLDKEDSFLQPWLTFEVMGKTSMKGGAVLFTNGEKMWKRFDKILREI 532
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5K5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X3_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.210e-45 Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = 2
Query: 89 RGAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRD 406
R +GLTDAKLLKHLQN CIVYACLAVKRNAGIVSTQA+HAAAA+GYKDIAVPGF K L+ENL+ + +F QPWLT EVM +SM G AVLFTDG+KLWKRFD +R+
Sbjct: 254 RSSGLTDAKLLKHLQNGCIVYACLAVKRNAGIVSTQARHAAAAQGYKDIAVPGFIKRLQENLDKEDFFLQPWLTCEVMGKSSMKGGAVLFTDGEKLWKRFDKILRE 359
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5JUN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN8_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.740e-42 Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 2
Query: 320 MRMTSMSGDAVLFTDGKKLWKRFDNRMRDLKKFYNPVWDSFVEGQPGD*LPSGSQDEDAIEYLLNGVYHTTSNTGNEENPIELEERRGGEGGDSEDESGEPSPGESEDGGSGKQQTTE 673
M TSM+G AVLFTDG+KLWKRF +R++KK+YNPV FVEGQPGD LPSGSQ +DAIEYLL+GVYH S TGN E+PIELEER GGEG ED+SGE SP ESEDG SGKQ+ TE
Sbjct: 1 MGKTSMTGGAVLFTDGEKLWKRFYKTLREIKKYYNPV---FVEGQPGDQLPSGSQGDDAIEYLLDGVYHMESGTGNAEDPIELEERGGGEGEGWEDDSGESSPTESEDGESGKQKGTE 115
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 158 bits (400), Expect = 2.390e-42 Identity = 79/146 (54.11%), Postives = 106/146 (72.60%), Query Frame = 2
Query: 128 LQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRDLKKFYNPVWDSFVEGQPGD*LPSGSQDEDAIEYLLNGVYHTTSNTGNEENPIE 565
+QN+CIVY+CLAVKRNAG+V T+AK AAAA+GY++IAVPGFF+W ++N D F LT + + TS G VL+T+GKKLW +FD M +KKF NP+WD +V+GQPG LPSG +DAI LL+G+Y T G+ E+P++
Sbjct: 42 IQNVCIVYSCLAVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDN---DITFPSE-LTMKRIGATSTDGAPVLYTNGKKLWTKFDAAMLKMKKFCNPIWDRYVKGQPGGNLPSGQTGDDAINNLLDGLYSKTK--GSAESPVQ 181
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5KBX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBX2_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.090e-40 Identity = 90/172 (52.33%), Postives = 106/172 (61.63%), Query Frame = 2
Query: 113 KLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSGDAVLFTDGKKLWKRFDNRMRDLKKFYNPVWDSFVEGQPGD*LPSGSQDEDAIEYLLNGVYHTTSNTGNEENPIELEERRGGEGGDSEDESGEPSP 628
++LKHLQN+CIVYACLAVKRNAGIVSTQAKHAAAA+GYKDIAVPGFFKWL+ENL+ + +F QPWLTFE DN + ++ + +AIEYLL+ VY S TG+ E+PIELEER GGEG SED SGE SP
Sbjct: 16 QVLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFE------------------------DNLGTNYRR---------------------AAKTNAIEYLLDEVYRMESGTGDAEDPIELEERGGGEGEGSEDGSGESSP 142
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5JXZ8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ8_9PHAE) HSP 1 Score: 143 bits (361), Expect = 3.280e-40 Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 2
Query: 89 RGAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSG 343
R +GLTDAKLLKHLQN+CIVYACLAVKRNAGIVSTQAKHAAA +GYKDIAVPGFFKWL+ENL+ + +F Q WLTFEVM TSM G
Sbjct: 30 RSSGLTDAKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAPQGYKDIAVPGFFKWLQENLDKEDFFLQLWLTFEVMGKTSMKG 114
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Match: A0A6H5JF32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF32_9PHAE) HSP 1 Score: 140 bits (353), Expect = 4.970e-39 Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 2
Query: 89 RGAGLTDAKLLKHLQNMCIVYACLAVKRNAGIVSTQAKHAAAAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMRMTSMSG 343
R +GLTDAKLLK LQN+CIVYACLAVKRNAG+V TQAKHA AA+GYKDIAVPGFFKWL+ENL+ + +F QPWLTFEVM TSM G
Sbjct: 30 RSSGLTDAKLLKPLQNVCIVYACLAVKRNAGMVFTQAKHATAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFEVMGKTSMKG 114 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig111.1507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig111.1507.1 >prot_Ecto-sp6_S_contig111.1507.1 ID=prot_Ecto-sp6_S_contig111.1507.1|Name=mRNA_Ecto-sp6_S_contig111.1507.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=196bp MNAMKLDGVQSLPLEFNSYAETVISMLRDKRSRPDGRQVAEAPPEHVHRVback to top mRNA from alignment at Ecto-sp6_S_contig111:22759..24815+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig111.1507.1 ID=mRNA_Ecto-sp6_S_contig111.1507.1|Name=mRNA_Ecto-sp6_S_contig111.1507.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2057bp|location=Sequence derived from alignment at Ecto-sp6_S_contig111:22759..24815+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig111:22759..24815+ >mRNA_Ecto-sp6_S_contig111.1507.1 ID=mRNA_Ecto-sp6_S_contig111.1507.1|Name=mRNA_Ecto-sp6_S_contig111.1507.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=588bp|location=Sequence derived from alignment at Ecto-sp6_S_contig111:22759..24815+ (Ectocarpus species6 EcLAC_371)back to top |