mRNA_Ecto-sp6_S_contig110.1479.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 438 bits (1127), Expect = 6.060e-151 Identity = 217/223 (97.31%), Postives = 217/223 (97.31%), Query Frame = 1
Query: 1 MVKFTAGFALASVLSLAHATDFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 669
MVKFTAGFALASVLSLAHATDFK VRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMED PGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ
Sbjct: 1 MVKFTAGFALASVLSLAHATDFK-----VRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 218
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 340 bits (873), Expect = 1.050e-112 Identity = 161/198 (81.31%), Postives = 176/198 (88.89%), Query Frame = 1
Query: 70 ASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 663
A E+ VRVRNLTYLQPFSPM VVAHTNDV++F+EG PASDA+K+MAEDGDNSAL+EL AS+DV PYICG V GE P+FPG+TWRG +T+DES CPD YSVVSMLINTNDAFVGIDS+ L G+ KVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGE FI V RGFHGVGPDLGEANYDWRNPVAEV +A
Sbjct: 4 AGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 331 bits (848), Expect = 1.260e-108 Identity = 163/224 (72.77%), Postives = 187/224 (83.48%), Query Frame = 1
Query: 1 MVKFTAGFALASVLSLAHAT--DFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
MV FTA FA+AS++SLA+A+ D+ VRVRNLTYLQPFSP L+VAHT DVALFKEG PA+DAIKLMAEDGDNSALLEL+ S DVAPYICG V EGPVFPGETWRG L +D CP+PVYSVV+MLINTNDAFVGIDSD L + GS+K FPPAFDAGTE N+E C++IPGP CPA SGN ++GPGE +IHVHRG HGVG DL EA+YDWRNPVAE++I +
Sbjct: 1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLEL-GSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYIQK 222
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 201 bits (510), Expect = 2.180e-57 Identity = 106/196 (54.08%), Postives = 131/196 (66.84%), Query Frame = 1
Query: 85 VRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMED-GPGEE-FIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
VRV NLT+ Q FSP ++VAH LF G A AIKLMAEDG+N ++ +A + CG A EGP+ PG+TW G +T D C +PVYSVV+ L NTNDAF+GID SK+FPPAFDAGTE NNE CT +PG ACPA + E+ G G E FIHVHRG +GVG DL +A+Y W+NPVAEV +++
Sbjct: 77 VRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVSK 268
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 196 bits (499), Expect = 1.150e-56 Identity = 106/197 (53.81%), Postives = 129/197 (65.48%), Query Frame = 1
Query: 85 VRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMED--GPGEE-FIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
VRV NLT+ Q FSP ++VAH LF +G A AIK MAE+G N + +A +D CG A EGP+ PG+TW G +T D + C PVYSVV+ L NTNDAF+GID SK+FPPAFDAGTE NNE CT I G ACPA E+ G G E FIHVHRG +GVG DL +A+YDW+NPVAEV +++
Sbjct: 6 VRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVSK 198
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.110e-52 Identity = 108/216 (50.00%), Postives = 131/216 (60.65%), Query Frame = 1
Query: 37 VLSLAHATDFKASELC---VRVRNLTYLQPFSPMLVVAHTNDVA-LFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMED-GPGEE-FIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
+LSLA S + VRV NLT+ Q FSP ++VAH LF G A AIK MAE+G N + +A + CG EGP+ PG+TW G +T D + C +PVYSVV+ L NTNDAF+GID SK FPPAFDAGTE NNE CT +PG ACPA E+ G G E FIHVHRG GVG DL +A+Y W NPVAEV +++
Sbjct: 1 MLSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRES---GFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVSK 212
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 179 bits (454), Expect = 1.080e-49 Identity = 110/233 (47.21%), Postives = 143/233 (61.37%), Query Frame = 1
Query: 1 MVKFTAGFALASVLSLAHATDFKASELC---VRVRNLTYLQPFSPMLVVAHTNDVA-LFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGE--GPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGS--SKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPG---EEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
MVKF G ALAS+LSLA + + S + VRV NLT+ Q FS ++VAH LF EG A +AI ++AE+G + + +A + CG A E G +FPG+TW G + D + C DPVYSVV+ L NTNDAF+GI GS SK FPPAFDAG+E NNE CT +PG ACP + + + G E FIHVHRGF G+G DL + +Y W+NPVA V +++
Sbjct: 1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATRER---GFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPA-GSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSK-DYGWQNPVAVVVVSK 227
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 153 bits (386), Expect = 8.240e-40 Identity = 90/212 (42.45%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 43 SLAHATDFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEEFIHVHRGFHGVG---PDLGEANYDWRNPVAEVFIARQ 669
++A T++ + V+NL YLQPFSP+L V H + LF+ G PAS A++ +AE GD S + L D ICG G P T++GT+TI + C +P S+V+ML TNDAF GI++ L S + PA+DAGTE NNE C ++ G CP G GE F+HVHRG HG+ P L +YDWRNPVA + ++ Q
Sbjct: 16 AVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVAL--FQDGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGLNVSKPGLS-VDYDWRNPVAYITVSVQ 221
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: A0A0S8ARA7_9BACT (Spondin domain-containing protein n=1 Tax=Nitrospira bacterium SG8_35_4 TaxID=1704025 RepID=A0A0S8ARA7_9BACT) HSP 1 Score: 136 bits (343), Expect = 1.140e-33 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1
Query: 91 VRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVF-PPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
V N+T Q F+P+LV+ H V+LF G PAS A+ +AE GD L E+ + + P + V +G +FPGET T+ I +S + S+ +M+I TND F+ ++ G++ ++ PA+DAG+E N+ELC +IPGP C ++ + EDG G ++ +H G HG+G L E+ YDWRNPVA + I R
Sbjct: 35 VTNMTKGQTFTPILVLTHRRGVSLFTPGSPASMALAALAEAGDTGPLTEMMSMN---PGVRDIVTSDGLLFPGET--KTIMIPQSERYRYI-SIAAMIIPTNDGFIALNGVQAPAGGNAVMYLSPAYDAGSEMNDELCDNIPGPVCGGEAISEEDGEG--YVRIHEGIHGIG-SLDESIYDWRNPVARIVIQR 218
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Match: A0A7U6JI78_9GAMM (Spondin domain-containing protein n=1 Tax=Thiolapillus brandeum TaxID=1076588 RepID=A0A7U6JI78_9GAMM) HSP 1 Score: 133 bits (334), Expect = 1.750e-32 Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 55 ATDFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVF--PPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
AT A + V + NLT Q F+P+LV H + +F G AS ++ +AE GD S L A+ D + + VA +G + PG++ TLT+D+S S+ SMLI TNDAF+GI + ++ V PA+DAGTE N+ELC++IPGP C ++E+G G FI VH G HGVG DL YDWRNP A V I R
Sbjct: 19 ATSSLADDYQVTITNLTQSQFFTPILVATHKRGMPVFIPGSAASSDLEALAEGGDISLLK---ATLDASSEVHETVASDGLLGPGQSV--TLTLDDSK-RFRYLSLASMLIPTNDAFIGISGMKMPKKKNAPVMIPVPAYDAGTEMNDELCSNIPGPDCGGAGMSVENGEG--FISVHPGIHGVG-DLAPGTYDWRNPAAMVKIER 215 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig110.1479.1 >prot_Ecto-sp6_S_contig110.1479.1 ID=prot_Ecto-sp6_S_contig110.1479.1|Name=mRNA_Ecto-sp6_S_contig110.1479.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=224bp MVKFTAGFALASVLSLAHATDFKASELCVRVRNLTYLQPFSPMLVVAHTNback to top mRNA from alignment at Ecto-sp6_S_contig110:239629..244293+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig110.1479.1 ID=mRNA_Ecto-sp6_S_contig110.1479.1|Name=mRNA_Ecto-sp6_S_contig110.1479.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4665bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:239629..244293+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig110:239629..244293+ >mRNA_Ecto-sp6_S_contig110.1479.1 ID=mRNA_Ecto-sp6_S_contig110.1479.1|Name=mRNA_Ecto-sp6_S_contig110.1479.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:239629..244293+ (Ectocarpus species6 EcLAC_371)back to top |