mRNA_Ecto-sp6_S_contig110.1475.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A835Z1L6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L6_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.040e-16 Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 100 QEHVEEKASAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYTYVPDA 300
+EH SA+EL+P L+ +H GD+RA+F++LGE PGKALK+PP +A +FAR Y GGYTY A
Sbjct: 26 KEHAAGGPSADELKPIVALYERHGGDVRAIFEELGEHPGKALKHPPSDAADFARRYLGGGYTYTESA 92
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A7S2SCV1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCV1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 9.420e-11 Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 58 LSKGAKSLRHTGVPQEHVEEKASAE----ELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYTYVPDAKS 306
L GAK+L+ T V E K E + L+ ++ G L +FD+LGE+P KA KYPP +AE+FA+ Y G +TYV A++
Sbjct: 13 LQAGAKNLKETTVAPRKAEGKGGDELDDKTIASLVSLYDKYNGSLDDIFDELGENPSKAKKYPPRDAEDFAQRYYAGAFTYVDPARA 99
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A6A3MD80_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3MD80_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.500e-10 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 31 RAVLLGAEDLSKGAKSLRHTGVPQEHVE----EKASAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYT 285
RA + +L+K +K L T +EH + + A AE+L+ L+ + D++A+F++L E+P KALKYPP +A EF + Y +G YT
Sbjct: 5 RAAAVSESELNKASKGLHATKGTREHSDSLEYDPAVAEKLQA---LYEKFDADVKAIFEELDENPRKALKYPPTSAAEFGKKYAQGFYT 90
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A7S2FST1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FST1_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.070e-9 Identity = 39/98 (39.80%), Postives = 52/98 (53.06%), Query Frame = 1
Query: 13 ADSKDDRAVLLGAEDLSKGAKSLRHTGVPQEHVEEKA---SAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYTYVPD 297
A +K A LG DL GAK L+ + E K S L ++ H GD+ A++ +LGE+PGKA+KYPP AE+FA+ Y G TY D
Sbjct: 15 AQAKGGPAFSLG--DLQAGAKGLQQVEDAPKKAEGKGDDGSDAALGGLIEIWNNHGGDIEAIYAELGENPGKAIKYPPSGAEDFAQKYLDGKLTYDGD 110
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A6G0X775_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X775_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 7.010e-9 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 139 EPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYTYV 291
E E L+ +H+GDLR +F++L E+P KALK+PP +A +F Y +G YTY
Sbjct: 41 ERLEALYEKHRGDLRDIFEELDENPRKALKHPPADATDFGIKYAQGFYTYA 91
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: H3GEZ2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEZ2_PHYRM) HSP 1 Score: 59.7 bits (143), Expect = 3.640e-8 Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 31 RAVLLGAEDLSKGAKSLRHTGVPQEHVEE-KASAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYT 285
+ + +L+K +K L T +EH + + + E + L+ + GD++A+F++L E+P KA+KYPP +A EF + Y +G YT
Sbjct: 318 KGTAVSESELNKASKGLHATKGAREHSDSLEFDPQVAEKLQALYEKFDGDIKAIFEELDENPRKAVKYPPTSAAEFGKKYAQGFYT 403
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A067C478_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C478_SAPPC) HSP 1 Score: 55.8 bits (133), Expect = 5.580e-8 Identity = 32/97 (32.99%), Postives = 51/97 (52.58%), Query Frame = 1
Query: 1 MESKADSKDDRAVLLGAEDLSKGAKSLRHTGVPQEHVEEKASAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYTYV 291
MESK + L+ +L K + +L+ T H + E +++H GDL+ +F++L E+P KALK+PP +A +F Y +G YTY
Sbjct: 1 MESK------QQALVSDGELLKSSNNLKATKANPRHDSLEYDPAVAERLAATYKKHGGDLKDIFEELDENPRKALKHPPSDANDFGVKYAQGFYTYA 91
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A225W394_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W394_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 8.070e-8 Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 31 RAVLLGAEDLSKGAKSLRHTGVPQEHVEE-KASAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYT 285
R + +L++ +K L T +EH + + + E + L+ + GD+ A+F++L E+P KALK+PP +A +F Y +G YT
Sbjct: 5 RGAAVSESELNQASKGLHATKGTREHSDSLEFDPQVAEKLKALYEKFNGDINAIFEELDENPRKALKHPPTSATDFGTKYAQGFYT 90
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A1V9YFW8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFW8_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.840e-7 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 154 LFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYT 285
L+ +H GDLR +F++L E+P KALK+PP +AE+F Y +G YT
Sbjct: 53 LYTKHHGDLRDIFEELNENPRKALKHPPSDAEDFGVKYAQGFYT 96
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Match: A0A3F2RDA1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDA1_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 2.270e-7 Identity = 28/86 (32.56%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 31 RAVLLGAEDLSKGAKSLRHTGVPQEHVEE-KASAEELEPYERLFRQHKGDLRAMFDDLGEDPGKALKYPPPNAEEFARVYTRGGYT 285
++ + +L+K +K L T +EH + + + + L+ + GD++A+F++L EDP KALK+PP +A +F Y +G YT
Sbjct: 5 KSAAVSESELNKASKQLHATKGTREHSDSLEYDSSIADKVAVLYEKLDGDIKAIFEELQEDPRKALKHPPQSAADFGTKYAQGFYT 90 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig110.1475.1 >prot_Ecto-sp6_S_contig110.1475.1 ID=prot_Ecto-sp6_S_contig110.1475.1|Name=mRNA_Ecto-sp6_S_contig110.1475.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=107bp MESKADSKDDRAVLLGAEDLSKGAKSLRHTGVPQEHVEEKASAEELEPYEback to top mRNA from alignment at Ecto-sp6_S_contig110:213159..214605- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig110.1475.1 ID=mRNA_Ecto-sp6_S_contig110.1475.1|Name=mRNA_Ecto-sp6_S_contig110.1475.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1447bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:213159..214605- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig110:213159..214605- >mRNA_Ecto-sp6_S_contig110.1475.1 ID=mRNA_Ecto-sp6_S_contig110.1475.1|Name=mRNA_Ecto-sp6_S_contig110.1475.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=321bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:213159..214605- (Ectocarpus species6 EcLAC_371)back to top |