mRNA_Ecto-sp6_S_contig110.1452.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig110.1452.1
Unique NamemRNA_Ecto-sp6_S_contig110.1452.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 8.350e-166
Identity = 229/238 (96.22%), Postives = 236/238 (99.16%), Query Frame = 1 
Query:    1 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLGHRRTR 714
            RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHD+ANV+PLDREFFLTTKCTLY+SGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENA+FCQALKD+YEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLA+P AQLEEMQRKSLEAY RMFGADVNDFRPSA+IILGILRRRLGHRRTR
Sbjct:    6 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHRRTR 243
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 455 bits (1170), Expect = 1.560e-158
Identity = 223/233 (95.71%), Postives = 231/233 (99.14%), Query Frame = 1 
Query:    1 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLG 699
            RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHD+ANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEE+GVVVTMHCFEEHQEHLLPENA+FCQALKD+YEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAG+IPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMM TLLA+PRAQLEEMQRKSLEAY +MFGADVNDFRPSAKIILGI+RRRLG
Sbjct:  191 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLG 423
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 2.060e-118
Identity = 170/238 (71.43%), Postives = 203/238 (85.29%), Query Frame = 1 
Query:    1 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLGHRRTR 714
            R SRPDVAGS+AMEAATNMHTCFYRSGYDISVPLAP+ V +D+A+V P DR FFLTTK +LY+SGHGS ER+SL+PLQDE NGV++++HCFE H+EHLLPEN ++C+AL D+Y+ + Y SLMN+TFGLVPAGR P TYRLGEVMSAGSIPVFVG DLVPPF E IDW S SFAF PD+VES+M+ TL A+PRA+LE+MQRKSLEAY R+FG ++ DF   A+I+L  L+RRL HR TR
Sbjct:  194 RDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEHRMTR 431
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 1.230e-107
Identity = 159/238 (66.81%), Postives = 194/238 (81.51%), Query Frame = 1 
Query:    1 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLGHRRTR 714
            R SRP VAGS+AMEAA+NM TCFYRSG+DISVPL  ++  +++A+VA  DR FFLTTK +LY+S HGS ER+SL+PLQDE NGV++++HCFE H EHLLPEN ++C+AL DRY  + Y SLMNSTFGLVPAGR P T+RLGEVMSAGSIPVFVG DLV PF E IDW S SFAF PD+V  +M+ TL A+PRA+LE+MQRKSL+A+ ++FG D   F PSA+I+L IL+RRLGHR  R
Sbjct:   98 RGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGHRMAR 335
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 4.740e-106
Identity = 154/226 (68.14%), Postives = 186/226 (82.30%), Query Frame = 1 
Query:   37 MEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLGHRRTR 714
            MEAA+NMHTCFYRSG+DISVPL   +  +++A+VA  DR FFLTTK TLY+SGHGS ER+SL+PLQDE NGV++++HCFE H EHLLPEN ++C+AL DRY  + Y SLMNSTFGLVPAGR P TYRLGEVMSAGSIPVFVG DLV PF E IDW S SFAF PD+V  +M+ TL A+PRA+LE+MQRKSL+A+ ++FG D + F PSA+I+L IL+RRLGHR  R
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGHRMAR 226
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 9.600e-89
Identity = 134/177 (75.71%), Postives = 148/177 (83.62%), Query Frame = 1 
Query:   73 RSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTL--YVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQ 597
            R+GYDISVPLAPR V HD+A VAP DR FFLTT C+L  Y+  HGSEE + L+PLQD+ENGV ++MHCFE HQ+HLLPEN +F QA  D Y+G DYRSLMNSTFGLVPAG    TYRLGEVMSAGSIPVFVGRDLVP FMEQIDW SISFAFTPDEV+SR MSTLLA+PR QLE MQ
Sbjct:    6 RTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 4.420e-74
Identity = 121/236 (51.27%), Postives = 170/236 (72.03%), Query Frame = 1 
Query:    1 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLGHRR 708
            R  +P +AGS AM+A++NM +CFYRSGYD +VPL  +    ++  +AP  R++FLT K  LY+SG G +ER+S++PL  E  GV++ ++CFE H EHLLPEN +FC AL +    ++Y  LMN+TFGLVPAGR PATYRL EVMSAG+IPVFV RD+V PF E++DWP++SF+F P+EV   MM TL ++  A+L  MQRKS++A+  +FG +    R  A++++  L  R+G+ R
Sbjct:  302 RDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDR-IARVVVDELVLRVGYHR 536
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 5.230e-70
Identity = 118/232 (50.86%), Postives = 160/232 (68.97%), Query Frame = 1 
Query:    7 SRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGADVNDFRPSAKIILGILRRRLGH 702
            +RP ++ ++AM+ + +  +C+YRSGYD+S+PL P +V  D A     DR++FLT K TLY+ G+G EER ++  + D  NGVV  + C   H +  LPEN D+CQ  + RY+ YDY  LMN+TF LVPAGR P ++RLGEVMSAG+IPVFV RD + PF EQIDWPS SF F+PD+V   MM TL A+  AQL EMQRKSL AY ++FG  V ++   A   + +L +R+G+
Sbjct:  296 ARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGG-VTNYSVIASNAIDMLVQRIGY 526
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 2.310e-62
Identity = 100/179 (55.87%), Postives = 126/179 (70.39%), Query Frame = 1 
Query:   61 TCFYRSGYDISVPLAPRQVLHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQ 597
            +C+YRSGYD+S+PL P +V  D A     DR++FLT K TLY+ G+G EER ++    D  NGVV  + C   H + +LPEN D+CQ  + RY+ YDY  LMN+TF LVPAGR P ++RLGEVMSAG+IPVFV RD + PF EQIDWPS SF F+PD+V   MM TL A+  A+L EMQ
Sbjct:    9 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
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BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Match: UPI000D16496E (exostosin-1c-like isoform X2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=UPI000D16496E)

HSP 1 Score: 111 bits (278), Expect = 8.630e-26
Identity = 72/212 (33.96%), Postives = 109/212 (51.42%), Query Frame = 1 
Query:   25 GSFAMEA--ATNMHTCFYRSGYDISVPLAPRQV--LHDMANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLL---PENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQRKSLEAYERMFGAD 639
            GS  M +  +T +H   YR G+DI++PL  R V  +  ++ + P +R++FLT K T Y+S  G     S      +   VVV   C       L    P     C   +  ++ YD+  L+N+TFGL PAGR PA+YR+ EV+SAG+IPV V  + V PF   I W      F   E+  R++ TL A+ + ++E  QR   + ++ +   D
Sbjct:   64 GSIGMASILSTELHDTTYRPGFDIAIPLPRRNVNVITGLSELKPFERKYFLTFKGTRYLSREGKFRSGSEFRGMHDGKDVVVVTTCDHGTNNKLRLWQPWRGAGCAEDQTVFDSYDFMELLNTTFGLAPAGRSPASYRMLEVLSAGAIPVLVADNYVKPFETLIKWQRCLLQFPTSEIH-RIVPTLRALSKKEVEMRQRYCQQIFQSVLKDD 274
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4H7_ECTSI8.350e-16696.22Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE1.560e-15895.71GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGQ8_9PHAE2.060e-11871.43GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI1.230e-10766.81Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H3_ECTSI4.740e-10668.14Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H4_ECTSI9.600e-8975.71Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JRU9_9PHAE4.420e-7451.27GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5L9T2_9PHAE5.230e-7050.86GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LQY4_ECTSI2.310e-6255.87Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
UPI000D16496E8.630e-2633.96exostosin-1c-like isoform X2 n=1 Tax=Physcomitrium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:11194..13279 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score470.3
Seed ortholog evalue5.3e-130
Seed eggNOG ortholog2880.D7G4H7
Preferred nameEXTL1
Model size717
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
Exons3
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
Cds size717
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348800.3340456-CDS-Ecto-sp6_S_contig110:11193..113671682348800.3340456-CDS-Ecto-sp6_S_contig110:11193..11367Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 11194..11367 +
1682348800.3489406-CDS-Ecto-sp6_S_contig110:12005..124281682348800.3489406-CDS-Ecto-sp6_S_contig110:12005..12428Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 12006..12428 +
1682348800.3596003-CDS-Ecto-sp6_S_contig110:13159..132791682348800.3596003-CDS-Ecto-sp6_S_contig110:13159..13279Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 13160..13279 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1452.1prot_Ecto-sp6_S_contig110.1452.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig110 11194..13279 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig110.1452.1

>prot_Ecto-sp6_S_contig110.1452.1 ID=prot_Ecto-sp6_S_contig110.1452.1|Name=mRNA_Ecto-sp6_S_contig110.1452.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=239bp
RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDMANVAPLD
REFFLTTKCTLYVSGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLP
ENADFCQALKDRYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIP
VFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAIPRAQLEEMQR
KSLEAYERMFGADVNDFRPSAKIILGILRRRLGHRRTR*
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mRNA from alignment at Ecto-sp6_S_contig110:11194..13279+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig110.1452.1 ID=mRNA_Ecto-sp6_S_contig110.1452.1|Name=mRNA_Ecto-sp6_S_contig110.1452.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2086bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:11194..13279+ (Ectocarpus species6 EcLAC_371)
AGGGCTTCGCGACCCGACGTGGCTGGTAGTTTTGCCATGGAGGCGGCCAC
CAACATGCACACGTGTTTCTACAGGAGTGGCTACGACATTTCAGTGCCTC
TTGCTCCGAGACAGGTGCTCCATGATATGGCCAACGTTGCCCCTCTGGAT
CGGGAGTTCTTCCTAACAACGAAGGTAGGTGCTGTCAGTGTTGTGTAGTT
CGAGCTGCTGGTTGCTTCTTCTCTTGCCACTACTGCTGCAGGTGTTGTCG
TTTGTGAACCGAAAGCCGATGTGACCATTTCAATACCTTCAGCACACCCA
TTTTCGCACCTGTTGCACACGTCGCCTTCGTGTTTTGTCTGGGAAATGTC
CAGCGTCGTGCGTGTGGGCATCAACAGTCCGTCCCGCCCAAAACATTGCT
TGGTACAGGCTTGTTGCGAAATAGACTCCAGTCGGTGGGTCGGTCGCATA
CATTTAATTGCACCTCTGATTCTGACTGACGAACTCCATCCAACGATCAT
AGCATGTCCTTGCTGACCCTAATAACGTGGGTTTCACCTAATTGTACTAC
ACGATATGTATACGCGAGTTACGGTTTTATGGCCAACCTACACGTGCCCA
AGCAGATATGTTCCGGCTCACACCCTGACCTGTAAAGACCAACCACAATT
TCATCAAGTCAAGGCTGTTGCTACTCGTGACCGCAGCACGGAAACATTGA
GGTTTGATGCCAGCAATGCTGGTTGCATGTGAAATAGTAATACATAATGT
GTCTCAACTCACTGTGACGCCCGTTCACCACGCCTGTGCTTTGTGGTTGC
GCTATATTCCAGTGTACATTATACGTTAGCGGCCACGGTTCGGAGGAAAG
GATTAGTCTTTTACCGCTGCAAGACGAAGAAAACGGCGTGGTAGTAACCA
TGCACTGCTTCGAGGAGCACCAAGAGCACCTACTTCCAGAGAATGCCGAC
TTCTGCCAAGCGCTGAAAGACCGGTATGAAGGCTACGACTACCGAAGCCT
GATGAACTCGACGTTCGGGCTGGTACCAGCTGGACGGGGTCCCGCCACGT
ACCGACTCGGGGAAGTGATGAGCGCTGGGTCGATCCCCGTGTTCGTTGGC
CGGGACCTAGTTCCTCCATTCATGGAACAAATCGACTGGCCTTCGATTTC
TTTCGCGTTTACGCCGGACGAAGTGGAGTCGCGCATGATGAGCACGTTGC
TGGCGATTCCACGAGCGCAGCTAGAGGAAATGCAGGTATACATGTGTGAA
CAACAAGGCTCGAATGAGATGGGCAGGGATGAGTAGCCCCCGGCATTCCC
CGCTGTATTGAGTGCAGAGAGGGTGGTGTTTCGAAGCCACTGGGCCATTT
ATTGAACGTGGTGCATCGTTCCTTTTACAGGCAGAAACAAAGATCGCGGT
GCCCACACCACGCCGTATGTAGTGACCAGGCCTGGGCGGGTGTGTACCAA
GCTTGCCGATTGAAAGTTCGCTTCTTCGGGGAGAATGATAATGACCCACT
AGCGAAGTTATTGCATATTCTGCCGTCGCCATACCCCCCTTATCATCTGA
GCCACGCCCTTGCATACTTCCACGGCCACGACAAACGATGCGTATCGTTG
CCGGGTTCCCGAGAGGAGAGAGAGAGAGGGGGTGAAAGGAAGCACATTTT
AAATACCTGGCGTTGACTGTGCAGGGCGAGTCCTAGCACAAGGTACCAGC
GCCACATTTCAAGCGTACCCCTCTCCGTTGTCGCACATTCGACTGTTCAA
TCGAAATTTTATTGTAATGAACGGAGCTTTGGCTACACTAACGTCAACAG
GCCAAACTGGGCCAGTACAGAGTACGTGATCATTTTCTCTACATGTCGGA
GCTATATCCGTCATACTGCCAATCCTCGGCAAGAAGTTCGAACATATAAC
CGTCCCGCACCGTCCGCTTTCGTTTCATATGACATGTGACATCGATAACG
GAATTGCCACAAAAAGCGCAAGTCGCTCGAGGCCTATGAGAGGATGTTCG
GGGCGGACGTGAACGACTTCCGCCCAAGCGCTAAAATCATTCTTGGCATT
CTTCGCAGGCGGCTAGGACACCGGCGGACGCGATGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig110:11194..13279+

>mRNA_Ecto-sp6_S_contig110.1452.1 ID=mRNA_Ecto-sp6_S_contig110.1452.1|Name=mRNA_Ecto-sp6_S_contig110.1452.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:11194..13279+ (Ectocarpus species6 EcLAC_371)
AGGGCTTCGCGACCCGACGTGGCTGGTAGTTTTGCCATGGAGGCGGCCAC
CAACATGCACACGTGTTTCTACAGGAGTGGCTACGACATTTCAGTGCCTC
TTGCTCCGAGACAGGTGCTCCATGATATGGCCAACGTTGCCCCTCTGGAT
CGGGAGTTCTTCCTAACAACGAAGTGTACATTATACGTTAGCGGCCACGG
TTCGGAGGAAAGGATTAGTCTTTTACCGCTGCAAGACGAAGAAAACGGCG
TGGTAGTAACCATGCACTGCTTCGAGGAGCACCAAGAGCACCTACTTCCA
GAGAATGCCGACTTCTGCCAAGCGCTGAAAGACCGGTATGAAGGCTACGA
CTACCGAAGCCTGATGAACTCGACGTTCGGGCTGGTACCAGCTGGACGGG
GTCCCGCCACGTACCGACTCGGGGAAGTGATGAGCGCTGGGTCGATCCCC
GTGTTCGTTGGCCGGGACCTAGTTCCTCCATTCATGGAACAAATCGACTG
GCCTTCGATTTCTTTCGCGTTTACGCCGGACGAAGTGGAGTCGCGCATGA
TGAGCACGTTGCTGGCGATTCCACGAGCGCAGCTAGAGGAAATGCAGCGC
AAGTCGCTCGAGGCCTATGAGAGGATGTTCGGGGCGGACGTGAACGACTT
CCGCCCAAGCGCTAAAATCATTCTTGGCATTCTTCGCAGGCGGCTAGGAC
ACCGGCGGACGCGATGA
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