mRNA_Ecto-sp6_S_contig11.1270.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 588 bits (1517), Expect = 1.350e-206 Identity = 317/345 (91.88%), Postives = 321/345 (93.04%), Query Frame = 2
Query: 2 GNPQQPGIISGEATERRSPFAKLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQGFDRRGKESLAFGNFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG 1036
G+PQQPGI+ GEATERRSPFAKLAGVGDGLRARARRLLVAEV+G QKHDAGVPRRRQGF RRG+ESLAFGNFGARK WVKEEE EVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFV XXXXX X IVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG
Sbjct: 154 GDPQQPGIMGGEATERRSPFAKLAGVGDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFGRRGRESLAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRG---------IVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG 489
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 486 bits (1251), Expect = 3.250e-167 Identity = 269/345 (77.97%), Postives = 282/345 (81.74%), Query Frame = 2
Query: 2 GNPQQPGIISGEATERRSPFAKLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQGFDRRGKESLAFGNFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG 1036
GN QQPGI+ G++TER SPFAKLAGVGDGLRARARRLLVAE++G QKHDAG PRRRQGF RR +ESLAFGNFGARK WVKEEE EVISAEMLA W + G ++ + XXXXXXXX E AAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMV+NRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVP+EE AAAKK+ VAG
Sbjct: 91 GNAQQPGIMGGKSTERSSPFAKLAGVGDGLRARARRLLVAEMEGRQKHDAGAPRRRQGFGRRSRESLAFGNFGARKQWVKEEEEEVISAEMLARTMRAWTRC-----------WPSSSPMDGNMLPKSPASSSSGNSSHPLPRHAPSXXXXXXXXXXXEEAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPREEVAAAKKKNVAG 424
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A835YQ35_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ35_9STRA) HSP 1 Score: 213 bits (543), Expect = 2.940e-64 Identity = 103/158 (65.19%), Postives = 124/158 (78.48%), Query Frame = 2
Query: 509 AMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANS 982
A GTL A A DL+ LF N+RVHEYNDNC +VRDLE +S +K++WA +PR+ PFKARDFVT V Y TL DGT+ V+NRPV H AA K YVRAEILIATN+MR N DP KTDF++V H+NPGG+ADS +GA +VN LCA+AP+ LL ALER+ANS
Sbjct: 2 ARGTLAAHAEDLFALFQSNDRVHEYNDNCADVRDLEVVSQHSKITWARSPRFGPFKARDFVTVVSYTTLADGTLAVVNRPVNHAAAPATKDYVRAEILIATNMMRANAHDPRKTDFVTVAHVNPGGVADSTLGANVVNMLCAQAPLKLLQALERAANS 159
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A7S3UPT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPT8_HETAK) HSP 1 Score: 210 bits (535), Expect = 5.150e-60 Identity = 114/241 (47.30%), Postives = 159/241 (65.98%), Query Frame = 2
Query: 281 LQAENDASVEAVLA-VIESDGWERVTEKSGVVVVRKFV-PXXXXXCRDARSMXXXXXXXXXXXXIVD-EGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGK-KYVRAEILIATNIMRPNREDP-SKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAP 988
L A+N V+ +L+ V + +GW V E+ G+ V +KF+ P RD S + E AAKFA VKA GT++A AS +Y+LFLDN RVHEYN C +V+DL LS+DTKV+WAC+PR+ P KARDF T VH R L DGT +V+NRP H A R +Y+R+E+LIA ++MRPNR+DP +KTDF +TH+N GGI ++ A ++N+LCA +P++L+ LE++A+ P
Sbjct: 149 LDAQNQRDVDRLLSEVTDDEGWGLVVERQGIKVWKKFLSPGRHSSLRDGESSSITAYDEQEQAALAAMEERAAKFAAVKAAGTINAPASSIYRLFLDNSRVHEYNSLCHKVKDLAYLSEDTKVTWACSPRFGPVKARDFCTVVHCRRLRDGTCVVVNRPAFHRGALRSDPQYIRSELLIAGHVMRPNRKDPENKTDFYVMTHVNLGGICETPPVAALINRLCASSPISLMKNLEKAASHQP 389
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA) HSP 1 Score: 206 bits (524), Expect = 3.750e-59 Identity = 103/232 (44.40%), Postives = 150/232 (64.66%), Query Frame = 2
Query: 293 NDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAP 988
N A+V+++LAV+ GW +V+ + +R ++ D+ AAAKF+CVKA L+A D+YKLFLDN +VHEYN++C+++ D+ER+S DTKV+W+ T + PFK RDFVT VHYR DGT+MVLNRP HP ++ RAE+L+A N+MRP + D SKT+F +TH+NPGG+ ++ +GA IVN++C++ PV+ + LER+A S P
Sbjct: 82 NQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTH-------------LETEAADDVAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQSHP 300
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 205 bits (521), Expect = 9.200e-56 Identity = 131/328 (39.94%), Postives = 177/328 (53.96%), Query Frame = 2
Query: 65 KLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQGFDRRGKESLAFGNFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDA--------------------RSMXXXXXXXXXXXXIVDEGAAA----KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 976
++AG + LR R R L + + R+RQ D G + L G KE EAE +M LQ D V+ V+ V+ DGWE V E+ GVVV R+++ +A S+ V E + +FACVKA L +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R PFKARDF T VH+RTL DGT+ +++PVEHPAA R +YVR+EIL+A N MRP DPS+T+F+ VTH+NPGG A++R GA +VN LC +PV + LE +A
Sbjct: 222 RIAGCAELLRRRGRELFLLGL-----------RKRQNPDGSGGDKLGMG---------KEGEAE--RRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 527
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 202 bits (513), Expect = 5.700e-55 Identity = 141/354 (39.83%), Postives = 188/354 (53.11%), Query Frame = 2
Query: 23 IISGEATERRSPFAKLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQG----FDRRGKESLAFG--------NFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXX---------------------IVDEGAAAK---FACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 976
+I T+ + ++L G +G R RA RLL A K V R G RRG+E G G K +E E +M LQ D V+ V+ V+ DGWE V E+ GVVV R+++ +A XXXXX + D+ +K FACVKA L +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R PFKARDF T VH+RTL DGT+ +++PVEHPAA R +YVR+EIL+A N MRP DPS+T+F+ VTH+NPGG A++R GA +VN LC +PV + LE +A
Sbjct: 216 VIRQHLTQLTAQLSELTG--EGFR-RAERLLSAA-----KASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 561
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC) HSP 1 Score: 177 bits (448), Expect = 3.910e-50 Identity = 82/144 (56.94%), Postives = 111/144 (77.08%), Query Frame = 2
Query: 491 KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVN 922
+FACVKA+G +DA ++ LFLD+ RV EYN++C+E++D++ LS +TKV+W+ + RY PFKARDF T VHYR LEDG ++V+NR EH A R KYVR+EIL+A NIMRP+ DP+KT +++THINPGG DS+ GA +VN
Sbjct: 16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A7S1HKH9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HKH9_HEMAN) HSP 1 Score: 179 bits (455), Expect = 4.570e-50 Identity = 93/235 (39.57%), Postives = 138/235 (58.72%), Query Frame = 2
Query: 278 ALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRP--VEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 976
A+Q N+ + + V+ D WE V GV V RK I D KF C+KA+ T++AR D+Y L D +RV EYND C +L LSDDT+++WAC+ +Y PFKARDF+T VH+R + DGT++V+++ +E ++ G YVR E+L+A N+MRP+ DP+KT+F ++ H+NPGG AD+ +G+++VN +C PVN + LE +A
Sbjct: 21 AVQTHNNELIGRLFNVMGGDDWEHVLCLGGVNVYRK--------------------------RITDVPGGEKFYCIKAVRTINARPIDVYDLLKDPQRVSEYNDECALTEELPPLSDDTRLTWACSKKYGPFKARDFITRVHHRKMTDGTLVVMSQSEDIEWERSQPGTDYVRTEVLLAGNVMRPDPTDPTKTEFTTIAHVNPGGAADTPLGSRLVNHICTHGPVNFINKLEIAA 229
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN) HSP 1 Score: 176 bits (447), Expect = 8.460e-49 Identity = 86/176 (48.86%), Postives = 118/176 (67.05%), Query Frame = 2
Query: 479 GAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLV----ALERSANSAPVP 994
G A+KF CVKA LDA + +Y LF+DN RV EYN+ CK++RDLE + TKV+W+ + R PFK RDFVT VHYRTL D T++V+NR +HPAA + +Y+R EI++ N+M+P DP KT F +TH+NPGG+A +R+G I+N A P++ + AL+R A P P
Sbjct: 33 GEASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKRDAAGIPPP 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1270.1 >prot_Ecto-sp6_S_contig11.1270.1 ID=prot_Ecto-sp6_S_contig11.1270.1|Name=mRNA_Ecto-sp6_S_contig11.1270.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=256bp MLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPPPPKACRDAback to top mRNA from alignment at Ecto-sp6_S_contig11:906209..910392- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1270.1 ID=mRNA_Ecto-sp6_S_contig11.1270.1|Name=mRNA_Ecto-sp6_S_contig11.1270.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4184bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:906209..910392- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:906209..910392- >mRNA_Ecto-sp6_S_contig11.1270.1 ID=mRNA_Ecto-sp6_S_contig11.1270.1|Name=mRNA_Ecto-sp6_S_contig11.1270.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:906209..910392- (Ectocarpus species6 EcLAC_371)back to top |