mRNA_Ecto-sp6_S_contig11.1270.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig11.1270.1
Unique NamemRNA_Ecto-sp6_S_contig11.1270.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI)

HSP 1 Score: 588 bits (1517), Expect = 1.350e-206
Identity = 317/345 (91.88%), Postives = 321/345 (93.04%), Query Frame = 2
Query:    2 GNPQQPGIISGEATERRSPFAKLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQGFDRRGKESLAFGNFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG 1036
            G+PQQPGI+ GEATERRSPFAKLAGVGDGLRARARRLLVAEV+G QKHDAGVPRRRQGF RRG+ESLAFGNFGARK WVKEEE EVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFV XXXXX       X           IVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG
Sbjct:  154 GDPQQPGIMGGEATERRSPFAKLAGVGDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFGRRGRESLAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRG---------IVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG 489          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE)

HSP 1 Score: 486 bits (1251), Expect = 3.250e-167
Identity = 269/345 (77.97%), Postives = 282/345 (81.74%), Query Frame = 2
Query:    2 GNPQQPGIISGEATERRSPFAKLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQGFDRRGKESLAFGNFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKKQKVAG 1036
            GN QQPGI+ G++TER SPFAKLAGVGDGLRARARRLLVAE++G QKHDAG PRRRQGF RR +ESLAFGNFGARK WVKEEE EVISAEMLA                    W   +   G ++ +                    XXXXXXXX   E AAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMV+NRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVP+EE AAAKK+ VAG
Sbjct:   91 GNAQQPGIMGGKSTERSSPFAKLAGVGDGLRARARRLLVAEMEGRQKHDAGAPRRRQGFGRRSRESLAFGNFGARKQWVKEEEEEVISAEMLARTMRAWTRC-----------WPSSSPMDGNMLPKSPASSSSGNSSHPLPRHAPSXXXXXXXXXXXEEAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPREEVAAAKKKNVAG 424          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A835YQ35_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ35_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.940e-64
Identity = 103/158 (65.19%), Postives = 124/158 (78.48%), Query Frame = 2
Query:  509 AMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANS 982
            A GTL A A DL+ LF  N+RVHEYNDNC +VRDLE +S  +K++WA +PR+ PFKARDFVT V Y TL DGT+ V+NRPV H AA   K YVRAEILIATN+MR N  DP KTDF++V H+NPGG+ADS +GA +VN LCA+AP+ LL ALER+ANS
Sbjct:    2 ARGTLAAHAEDLFALFQSNDRVHEYNDNCADVRDLEVVSQHSKITWARSPRFGPFKARDFVTVVSYTTLADGTLAVVNRPVNHAAAPATKDYVRAEILIATNMMRANAHDPRKTDFVTVAHVNPGGVADSTLGANVVNMLCAQAPLKLLQALERAANS 159          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A7S3UPT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPT8_HETAK)

HSP 1 Score: 210 bits (535), Expect = 5.150e-60
Identity = 114/241 (47.30%), Postives = 159/241 (65.98%), Query Frame = 2
Query:  281 LQAENDASVEAVLA-VIESDGWERVTEKSGVVVVRKFV-PXXXXXCRDARSMXXXXXXXXXXXXIVD-EGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGK-KYVRAEILIATNIMRPNREDP-SKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAP 988
            L A+N   V+ +L+ V + +GW  V E+ G+ V +KF+ P      RD  S             +   E  AAKFA VKA GT++A AS +Y+LFLDN RVHEYN  C +V+DL  LS+DTKV+WAC+PR+ P KARDF T VH R L DGT +V+NRP  H  A R   +Y+R+E+LIA ++MRPNR+DP +KTDF  +TH+N GGI ++   A ++N+LCA +P++L+  LE++A+  P
Sbjct:  149 LDAQNQRDVDRLLSEVTDDEGWGLVVERQGIKVWKKFLSPGRHSSLRDGESSSITAYDEQEQAALAAMEERAAKFAAVKAAGTINAPASSIYRLFLDNSRVHEYNSLCHKVKDLAYLSEDTKVTWACSPRFGPVKARDFCTVVHCRRLRDGTCVVVNRPAFHRGALRSDPQYIRSELLIAGHVMRPNRKDPENKTDFYVMTHVNLGGICETPPVAALINRLCASSPISLMKNLEKAASHQP 389          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 3.750e-59
Identity = 103/232 (44.40%), Postives = 150/232 (64.66%), Query Frame = 2
Query:  293 NDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAP 988
            N A+V+++LAV+   GW +V+  +    +R ++                           D+ AAAKF+CVKA   L+A   D+YKLFLDN +VHEYN++C+++ D+ER+S DTKV+W+ T  + PFK RDFVT VHYR   DGT+MVLNRP  HP      ++ RAE+L+A N+MRP + D SKT+F  +TH+NPGG+ ++ +GA IVN++C++ PV+ +  LER+A S P
Sbjct:   82 NQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTH-------------LETEAADDVAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQSHP 300          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 9.200e-56
Identity = 131/328 (39.94%), Postives = 177/328 (53.96%), Query Frame = 2
Query:   65 KLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQGFDRRGKESLAFGNFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDA--------------------RSMXXXXXXXXXXXXIVDEGAAA----KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 976
            ++AG  + LR R R L +  +           R+RQ  D  G + L  G         KE EAE    +M  LQ   D  V+ V+ V+  DGWE V E+ GVVV R+++        +A                     S+             V E +      +FACVKA   L      +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R  PFKARDF T VH+RTL DGT+  +++PVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LC  +PV  +  LE +A
Sbjct:  222 RIAGCAELLRRRGRELFLLGL-----------RKRQNPDGSGGDKLGMG---------KEGEAE--RRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 527          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 5.700e-55
Identity = 141/354 (39.83%), Postives = 188/354 (53.11%), Query Frame = 2
Query:   23 IISGEATERRSPFAKLAGVGDGLRARARRLLVAEVDGGQKHDAGVPRRRQG----FDRRGKESLAFG--------NFGARKHWVKEEEAEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXX---------------------IVDEGAAAK---FACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 976
            +I    T+  +  ++L G  +G R RA RLL A      K    V  R  G      RRG+E    G          G      K +E E    +M  LQ   D  V+ V+ V+  DGWE V E+ GVVV R+++        +A   XXXXX                            + D+   +K   FACVKA   L      +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R  PFKARDF T VH+RTL DGT+  +++PVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LC  +PV  +  LE +A
Sbjct:  216 VIRQHLTQLTAQLSELTG--EGFR-RAERLLSAA-----KASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 561          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC)

HSP 1 Score: 177 bits (448), Expect = 3.910e-50
Identity = 82/144 (56.94%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  491 KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVN 922
            +FACVKA+G +DA    ++ LFLD+ RV EYN++C+E++D++ LS +TKV+W+ + RY PFKARDF T VHYR LEDG ++V+NR  EH  A R  KYVR+EIL+A NIMRP+  DP+KT  +++THINPGG  DS+ GA +VN
Sbjct:   16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A7S1HKH9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HKH9_HEMAN)

HSP 1 Score: 179 bits (455), Expect = 4.570e-50
Identity = 93/235 (39.57%), Postives = 138/235 (58.72%), Query Frame = 2
Query:  278 ALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPXXXXXCRDARSMXXXXXXXXXXXXIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRP--VEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 976
            A+Q  N+  +  +  V+  D WE V    GV V RK                           I D     KF C+KA+ T++AR  D+Y L  D +RV EYND C    +L  LSDDT+++WAC+ +Y PFKARDF+T VH+R + DGT++V+++   +E   ++ G  YVR E+L+A N+MRP+  DP+KT+F ++ H+NPGG AD+ +G+++VN +C   PVN +  LE +A
Sbjct:   21 AVQTHNNELIGRLFNVMGGDDWEHVLCLGGVNVYRK--------------------------RITDVPGGEKFYCIKAVRTINARPIDVYDLLKDPQRVSEYNDECALTEELPPLSDDTRLTWACSKKYGPFKARDFITRVHHRKMTDGTLVVMSQSEDIEWERSQPGTDYVRTEVLLAGNVMRPDPTDPTKTEFTTIAHVNPGGAADTPLGSRLVNHICTHGPVNFINKLEIAA 229          
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN)

HSP 1 Score: 176 bits (447), Expect = 8.460e-49
Identity = 86/176 (48.86%), Postives = 118/176 (67.05%), Query Frame = 2
Query:  479 GAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLV----ALERSANSAPVP 994
            G A+KF CVKA   LDA  + +Y LF+DN RV EYN+ CK++RDLE  +  TKV+W+ + R  PFK RDFVT VHYRTL D T++V+NR  +HPAA +  +Y+R EI++  N+M+P   DP KT F  +TH+NPGG+A +R+G  I+N   A  P++ +     AL+R A   P P
Sbjct:   33 GEASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKRDAAGIPPP 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAW9_ECTSI1.350e-20691.88START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JSI0_9PHAE3.250e-16777.97START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YQ35_9STRA2.940e-6465.19START domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3UPT8_HETAK5.150e-6047.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RES9_9STRA3.750e-5944.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5J623_9PHAE9.200e-5639.94START domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LLJ0_ECTSI5.700e-5539.83START domain-containing protein (Fragment) n=1 Tax... [more]
I2CRQ3_NANGC3.910e-5056.94Lipid transfer protein 5-like protein (Fragment) n... [more]
A0A7S1HKH9_HEMAN4.570e-5039.57Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
A0A6U4ZLH7_HEMAN8.460e-4948.86Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:906209..910392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score144.1
Seed ortholog evalue9.3e-32
Seed eggNOG ortholog2880.D7G2E9
Model size1379
KEGG koko:K10779
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.lipid binding
EggNOG OGsKOG2761@1,KOG2761@2759
Ec32 ortholog descriptionSTART domain
Ec32 orthologEc-27_006150.1
EC3.6.4.12
Cds size768
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1270.1prot_Ecto-sp6_S_contig11.1270.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig11 906549..910121 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348781.4976852-UTR-Ecto-sp6_S_contig11:906208..9065481682348781.4976852-UTR-Ecto-sp6_S_contig11:906208..906548Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig11 906209..906548 -
1682348781.5524821-UTR-Ecto-sp6_S_contig11:910121..9103921682348781.5524821-UTR-Ecto-sp6_S_contig11:910121..910392Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig11 910122..910392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348781.5097659-CDS-Ecto-sp6_S_contig11:906548..9068191682348781.5097659-CDS-Ecto-sp6_S_contig11:906548..906819Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 906549..906819 -
1682348781.517354-CDS-Ecto-sp6_S_contig11:907242..9074331682348781.517354-CDS-Ecto-sp6_S_contig11:907242..907433Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 907243..907433 -
1682348781.5258083-CDS-Ecto-sp6_S_contig11:907763..9079101682348781.5258083-CDS-Ecto-sp6_S_contig11:907763..907910Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 907764..907910 -
1682348781.534689-CDS-Ecto-sp6_S_contig11:909463..9096131682348781.534689-CDS-Ecto-sp6_S_contig11:909463..909613Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 909464..909613 -
1682348781.5436685-CDS-Ecto-sp6_S_contig11:910112..9101211682348781.5436685-CDS-Ecto-sp6_S_contig11:910112..910121Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 910113..910121 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig11.1270.1

>prot_Ecto-sp6_S_contig11.1270.1 ID=prot_Ecto-sp6_S_contig11.1270.1|Name=mRNA_Ecto-sp6_S_contig11.1270.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=256bp
MLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVPPPPKACRDA
RSMAPSSSSSSSSGGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNER
VHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLED
GTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTH
INPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAKK
QKVAG*
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mRNA from alignment at Ecto-sp6_S_contig11:906209..910392-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig11.1270.1 ID=mRNA_Ecto-sp6_S_contig11.1270.1|Name=mRNA_Ecto-sp6_S_contig11.1270.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4184bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:906209..910392- (Ectocarpus species6 EcLAC_371)
GGGGAATCCGCAGCAGCCAGGGATAATAAGCGGAGAGGCCACGGAGAGAA GAAGCCCTTTCGCCAAGCTGGCGGGGGTTGGCGACGGGCTCAGAGCTCGC GCGCGGCGGCTGCTGGTAGCCGAGGTGGATGGGGGGCAGAAACATGACGC AGGGGTGCCGAGGAGGAGGCAAGGGTTCGACCGGAGGGGCAAGGAATCCT TGGCTTTCGGGAATTTCGGCGCGCGAAAGCACTGGGTTAAGGAGGAAGAA GCGGAGGTTATCAGCGCGGAAATGTTGGCGGTGCGTTTCAAGCCGGTGTG CGTGTGGGAATTGTTGTCGCAAGTGCGCACATCATGACGTAGCTGTAGGC GGGGAAAGCTTGCCAAACTAACCTGGGTGGTAGTACGTACCCCGAAACGT CCCCTCCGTTCGTTTGTCAGCATCGCCACAACGGCACTTGGCAAAGTTTG GTCTCGTACTACGTACTGTACATGACGGCTTACGACCCCACGGTGAAATT GATTTTGCCCCCCTTTGTTTTTTGGGCGCATCAGGCTGAGACTTGGTGAC ATCGTGTGGATCAGAACTCACAGACAAATGATTCTGCGATCTATATCACC TTATCCATACGCTTGGTACCAACATTTCCGGGTCACGACGCTGCACAATA AGCCGCGGCACGAGCAGCGGTGTGTTTGCTCTGTGCTGGTTTGGTAATCC GAGACAACGGTAGAGGGCACCGAAAGCAGCAATAACACCCGCAACCAACG ATGCTCGCATCCCTCCCCTGGCCTCCCAGCTCCAGGCAGAGAACGATGCG AGCGTGGAGGCGGTGCTGGCCGTCATCGAGTCCGACGGGTGGGAACGTGT CACCGAAAAGTCCGGCGTCGTCGTCGTCCGGAAGTTCGTCCCACCCCCTC CCAAGGCATGTAGGGATGCGAGGTCAATGGTCTAGCGACTGCGGCATGCA CGATTGTATGAGTACACCGCCCTCCCAAGGCATGGTTGTAGATAGAAGCA TTGTGTGTGTTGCAATATATCCGGCAACATGAGGAAGAGGCCCATCGGGA GTTCTATTCCGCCGGTTCGGTGAGATTGTTGTGAGTTATCTGTCGGTGGA GCTTACTCTTCGAACAACCATGGCGATGAAACACGCAGCAGTAATTTTTT GTCGAACGGCATACAATAATGTCGAAAGTTGTTGTTGTTGTTGTTGTCTT CACATTAAAAACCGTTCCGATCTCTCTCTACCCAGTACCTTCGTATGTCT GTACTGATCCAACACTCGACGCGGTCGATTCCCGTGGTCACAGGTTAACT TACCCTAAAAAGGTACACTCAAATAAACTGGCCCCGACGGGTCCGCAAGT CAATAGAAATCAACGACAGATATTCTGGAATCCTCCACTCCCTCTTCGCG CTATGCGAGGTATCAGCTGAGACTAGCAGTCACTATCTATCATGGGCCGG AGAGAAAGAGGTGCACCCCCTTGGTTCAATCTTGGTACTTCACAACGCAA GCAGAGACAAGGCCATCTGGCACAGAAAAAGAGAAAAAAAAGAGAAGAAA AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAAACCGCAA GGAGAAGAGAAAAAAAGAAATAAAAGAAATAAAATGAAAATAAATGAAAA AGGGCGAGGACAAAGAGGGACCAGGCCGAAAATAACAAGAAGTATGAGGC AGAACAAGGCACACGGTGGAGAGACCACTAACGAACAAGCAAACACGCAA ACATGGCCACCAACCAGCGATACATTGTAATGGTACGAAATCACTACTGG GGGGTTGGTGCAATGGTGCAGCGTTGGGGCGGGGGAATTGGCTAAAAGAA ATTCAATCCGGCACGTGTCGTGCCACTCTGTCCGTCTCTTCTCGTTTGAT TTCTTCCCTCGCCGTCTCGTCCGTCTCCTGCCCCCCTCCCGCCCCATTGG TTGTTGGCTTGTGGTGTAGTAAAACGTATCAAATGTTTTTCCATGGGCAC CCCCCCAAACACCTTACTCCCGGGGCCCCTTCTTTAAAGTTCGCTGTTGC ATTCTTGGGGTAATGTAGGTTGTGGACGAAAGGCATGAACGGTAGATAAT TTTTACGCCTGCGTGCTTGTCGTTGGTACCCCCCTCAATGCTCCATCATC TCGTGGTCAATGGTCTAGCAACCAAGGCATGCAAAACGTAAGTACGCCGC CCCCCCCTCCCCCCATCACACTTGCATATATACCCTTCCCCCCGTTTCCC TGTACTGGGGCATAGGAAATGAGTTGAAAAGGCGAGTAGTGATATCGATA GGATAGATGGTTAGGGGAAACATTTTTGAGCCAGCTTTGGCAAAGTAGGA AGAGCCGATTGGCCGTCGGTGATCGGTCCTGTGAGAACAATGCTCCGTCC CCTCGAGGACGCGTGGTCAATCGTCTAACCGCTAGGGTATGCAAAACATG AGAGTACGCTCCCCCCCCGTTTCCCTGCGCAGGCGCCATCATCCTCCTCC TCCTCCTCCAGCGGAGGGATCGTCGACGAAGGAGCAGCCGCCAAGTTTGC TTGTGTCAAGGCCATGGGGACGCTCGACGCTCGAGCCAGCGATCTGTACA AGCTCTTCCTCGACAACGAGCGCGTGCACGTGAGTAGGGGGTGCCGTGGT GTCGGAGCACGGGGGGGGGGGGGTCTTGTTCTACTATGCGTGTAGAGCGA CAACACGAAGCGTTACCCCTACGTGTATTCACGCGCGCGTTGCCATGTTG CCATCGATGGCGTACATCGTCCTGCTGTCTCTTTTTTTGTGCTCGTGTTT CCTGACTGGCGTTACGCGTTGCTGCTAGACTTGTGCCAATCGCGCTCATC TTTCTGCTCCGCTGCCACATCTCTCTCTGTTTTGTGGGCCTCCTCTCTCC CTCGCTCCGTCTATTGTTGCTCGTCTCCATTTTGATACGACGACGCCCGG CGGGGACAGGAGTACAACGATAACTGCAAGGAAGTGCGAGACCTCGAGAG GCTGTCGGACGACACCAAGGTGTCGTGGGCCTGCACGCCCAGGTACCGGC CGTTCAAGGCCAGGGACTTCGTGACCGCTGTCCACTACCGCACCCTGGAA GACGGAACGATGATGGTGCTCAACAGGCCCGTCGAGCACCCGGCGGCAAG GTGGGCCAATGGAAAATGTATTTTTTTGCCGTACGTCGACGACGCACACG TCAATCCGGGGGCGTGGTCAGAAGGATGAGAAAGGAGGCAGTTTTGTAGC GGACGACCTTTGGTTCCGCGCGGCGCGGGGGGCGTTATTTGGCCTTCAAG CAGAAGCGTCAGTTTTGCATCTGGCTGGCTGGCAGGCAGCGGGGTAGACG TGCATGTTGTGCGGGTGCGCCCTTTTTTTTTTTTTTTTTCGAGAGTCAAC AACCATGTTTCGGACAGTGAAGCGTAGAGGTTTTTATGCCACCCATGCTG GGGTAGTGGCGCTTCCTTCGCCGTGAACCCTACAGCTTCTTCGCAAATAG CCATACGCACATGCATACGTTATTTCGCGACGAAATATCACAGCAACAAT GACGTCACTGAAAACATTTACAGGCGCGGGAAGAAGTACGTTCGAGCCGA GATCCTCATAGCGACCAACATCATGCGGCCCAACCGCGAGGACCCCAGCA AGACCGACTTCATCTCGGTGACCCACATCAACCCCGGCGGCATAGCGGAC TCGAGGATCGGGGCCAAGATAGTCAACAAGCTATGCGCCAAGGCGCCGGT GAACCTGCTCGTCGCCCTGGAACGTTCCGCGAACTCGGCGCCCGTTCCGA AGGAGGAAGCGGCGGCGGCCAAGAAACAGAAGGTGGCGGGGTAGCCATAA TTTCGGAAGTCTGTGCCCCTTTCGGTCTGGATCGTTCCGCGAAATTCTCT TCCCGTTCAGAAGAAAGAAGGCAGCAGCGTAGACGAGCAAGAAGAATGTA GCGGGTCACGCCGGGGTCGGCAACGCTTTCGAGCGGGATCGGATCGTTCG GAGATTTTTTTCACCGTTGGCAAAATCAAAGGCATATACGGTCGGCTACG ATTTTTTTGCGAAAACTGGGTTCAATCCCACAGAAGAAGAGCTGTTTCTG GACGGCCTCCTCATGCTTGCTATTGTACAAGAAAGCAACGCCTTCCTAGA TCTTGCGCGAGGGCGTCGGGTGTGTGTGCAGGCA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:906209..910392-

>mRNA_Ecto-sp6_S_contig11.1270.1 ID=mRNA_Ecto-sp6_S_contig11.1270.1|Name=mRNA_Ecto-sp6_S_contig11.1270.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:906209..910392- (Ectocarpus species6 EcLAC_371)
ATGTTGGCGCTCCAGGCAGAGAACGATGCGAGCGTGGAGGCGGTGCTGGC
CGTCATCGAGTCCGACGGGTGGGAACGTGTCACCGAAAAGTCCGGCGTCG
TCGTCGTCCGGAAGTTCGTCCCACCCCCTCCCAAGGCATGTAGGGATGCG
AGGTCAATGGCGCCATCATCCTCCTCCTCCTCCTCCAGCGGAGGGATCGT
CGACGAAGGAGCAGCCGCCAAGTTTGCTTGTGTCAAGGCCATGGGGACGC
TCGACGCTCGAGCCAGCGATCTGTACAAGCTCTTCCTCGACAACGAGCGC
GTGCACGAGTACAACGATAACTGCAAGGAAGTGCGAGACCTCGAGAGGCT
GTCGGACGACACCAAGGTGTCGTGGGCCTGCACGCCCAGGTACCGGCCGT
TCAAGGCCAGGGACTTCGTGACCGCTGTCCACTACCGCACCCTGGAAGAC
GGAACGATGATGGTGCTCAACAGGCCCGTCGAGCACCCGGCGGCAAGGCG
CGGGAAGAAGTACGTTCGAGCCGAGATCCTCATAGCGACCAACATCATGC
GGCCCAACCGCGAGGACCCCAGCAAGACCGACTTCATCTCGGTGACCCAC
ATCAACCCCGGCGGCATAGCGGACTCGAGGATCGGGGCCAAGATAGTCAA
CAAGCTATGCGCCAAGGCGCCGGTGAACCTGCTCGTCGCCCTGGAACGTT
CCGCGAACTCGGCGCCCGTTCCGAAGGAGGAAGCGGCGGCGGCCAAGAAA
CAGAAGGTGGCGGGGTAG
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