mRNA_Ecto-sp6_S_contig11.1264.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A6H5JYC8_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 3.510e-47 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 2
Query: 155 MANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAPQADSVVSLAP 415
MANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDK APQADSVVSLAP
Sbjct: 1 MANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKAAPQADSVVSLAP 87
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: D8LAW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW3_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.210e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 2
Query: 227 GIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAPQADSVVSLAP 415
GIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAPQADSVVSLAP
Sbjct: 56 GIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAPQADSVVSLAP 118
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A836CN55_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN55_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 9.220e-17 Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 2
Query: 164 LVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLAL 349
LV++WL+GIGLGYA+P F QG+ P+ LS L + +F LG+++ DRKKLFYL+QRV+LA+
Sbjct: 3 LVETWLSGIGLGYAIPTFKAQGVIVPEKLSRLSLDEFEGLGVTNTEDRKKLFYLVQRVRLAV 64
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A1Z5KT23_FISSO (Kinesin-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KT23_FISSO) HSP 1 Score: 83.2 bits (204), Expect = 6.900e-16 Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 164 LVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAPQADSVVS 406
LV +WLNGIGL YAVP F GID+P L++LDV F LG+ D DR+KLF+L+QR+K+A + D+T+ + DSV++
Sbjct: 3 LVATWLNGIGLSYAVPTFHAAGIDNPAALAQLDVSHFEALGVKDGEDRRKLFFLVQRIKMACDKS----DQTSSEVDSVLA 79
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A448Z7E2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7E2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.880e-14 Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 2
Query: 164 LVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAP 385
LV +WLNGIGLG VP F GI SP L++LDV F LG+++ +DR+KLFYL+QR+K+A+ + E P
Sbjct: 3 LVSTWLNGIGLGSVVPTFEAAGIVSPSHLADLDVAYFESLGVTNPDDRRKLFYLVQRIKMAVHKKXKVEGSKTP 76
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A7S1ZZ94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZ94_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.100e-12 Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 2
Query: 164 LVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVK 340
LV +WLNGIGLG+A+P F GI +P L+EL++ + +LG+ N+RKKLFYL+Q+ K
Sbjct: 15 LVTTWLNGIGLGHAIPAFRAAGIVTPTDLAELELHMYEDLGVKSSNERKKLFYLVQKKK 73
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A7S1GDQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDQ3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.240e-10 Identity = 29/72 (40.28%), Postives = 49/72 (68.06%), Query Frame = 2
Query: 143 SGSTMANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARG 358
SG+ +++ WL+ IGLGY++P+F GI+SP L +L D+ +G+++ +DRK+LF L+ RV+ A +G
Sbjct: 11 SGAAGGSIIYQWLDRIGLGYSIPMFQALGINSPQSLMKLTFEDYDAVGVTEFDDRKRLFELVHRVREAAKKG 82
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: A0A7S2RLA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLA9_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.720e-9 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 2
Query: 146 GSTMANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAEDKTAPQADS 397
G++ + V ++L +GL YAVP F +GI S +S L V F ELGI D DR+KL++ + RVK+A+ + ED T+ +ADS
Sbjct: 20 GTSSEDHVTAFLVKLGLQYAVPRFKERGITSLPKISALTVEHFDELGIVDVEDRRKLWFFVHRVKMAV---QGVEDFTSGRADS 100
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: K0T2T7_THAOC (SAM domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2T7_THAOC) HSP 1 Score: 60.1 bits (144), Expect = 4.750e-8 Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 2
Query: 143 SGSTMANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARGRAAED 373
S S +LV SWL+ I LG+A F GI +P L+EL++V + LG+ RK+LFYL+QRV+ L E+
Sbjct: 5 SPSRPPSLVASWLSSIDLGHAAANFEMAGIVTPRSLAELELVHYGPLGVKSAEHRKRLFYLVQRVRAELEESGGGEE 81
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Match: K0THC1_THAOC (SAM domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THC1_THAOC) HSP 1 Score: 60.5 bits (145), Expect = 5.180e-8 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 2
Query: 143 SGSTMANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKLFYLIQRVKLALARG 358
S S +LV SWL+ I LG+A F GI +P L+EL++V + LG+ RK+LFYL+QRV+ L G
Sbjct: 49 SPSRPPSLVASWLSSIDLGHAAANFEMAGIVTPRSLAELELVHYGPLGVKSAEHRKRLFYLVQRVRAELEEG 120 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1264.1 >prot_Ecto-sp6_S_contig11.1264.1 ID=prot_Ecto-sp6_S_contig11.1264.1|Name=mRNA_Ecto-sp6_S_contig11.1264.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=87bp MANLVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDback to top mRNA from alignment at Ecto-sp6_S_contig11:872716..873948- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1264.1 ID=mRNA_Ecto-sp6_S_contig11.1264.1|Name=mRNA_Ecto-sp6_S_contig11.1264.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1233bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:872716..873948- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:872716..873948- >mRNA_Ecto-sp6_S_contig11.1264.1 ID=mRNA_Ecto-sp6_S_contig11.1264.1|Name=mRNA_Ecto-sp6_S_contig11.1264.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=261bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:872716..873948- (Ectocarpus species6 EcLAC_371)back to top |