mRNA_Ecto-sp6_S_contig11.1263.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE) HSP 1 Score: 651 bits (1679), Expect = 1.010e-231 Identity = 377/433 (87.07%), Postives = 382/433 (88.22%), Query Frame = 1
Query: 1 MEGADPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAA-DRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 1296
MEG DP LLRYAAQPDVVLSQERDLYYAN LLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPL RRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGG XXXXXXXXX VGIAVSS SG TAA DRA XXXXXXXXXXXXXXXXXXXXX +FLRRVL+WARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMR +GARLAYARPEQEA R RYAVLGLLLLLQAAAEAATASAETAERWRATARAALSE FPRS+E EA CGEG GPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMS+RENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA
Sbjct: 1 MEGGDPTLLRYAAQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.080e-52 Identity = 158/410 (38.54%), Postives = 194/410 (47.32%), Query Frame = 1
Query: 64 ERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 1293
ERD YY L +G ++ E+ +G RR +LA EL LA LY GLT LAG+QT+GQEYC DL+ S G +P Y+ + V PYL R+ GW LR +R+PF A ++ A +N +AA V S XXXXXXXXXXXXXXXXXXXXX + VL W HLA F+ +GR+AN AMR RL Y R Q+AP RY +LG+L+L + E +A +G+G RVP + T A R RC+LCM RE+ AAT CGHLFCWECIVGWC+TNPECPLCRQP PQSIVC+Y Y
Sbjct: 2 ERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYC--DLMFSRNG----LCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPP---------DNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRA-QDAPLPRYTILGVLMLARFGFEFGAQAARKLHG--------------------IIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAAR-----RHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A0A0L2W0_CUCSA (RING-type domain-containing protein n=13 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L2W0_CUCSA) HSP 1 Score: 132 bits (333), Expect = 1.030e-30 Identity = 125/437 (28.60%), Postives = 189/437 (43.25%), Query Frame = 1
Query: 34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLR---SLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGV-------------GDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
AAQP+++ + E+D YA+ + + + L GAR + E + L LY+ LT +G+QTLG+EYC I+ V G SP P R + + AVPY+ ER+ R G+ SL D F GE A+ A S ++++ E + G +LR V W P + L+ ALR +L FYF+G + +++ R G R + +P + PR Y +LG+ LL+Q AA E R ++ +++S +S G PS G G+ GD+ P+ + T + ++ +C+LC+SNR++ ATPCGH+FCW CI+ WC PECPLCR P+ S+VCLY
Sbjct: 35 AAQPEIMRAAEKDDQYASFVY-DACRDAFRHLFGARLAVAYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDINQVSGPYG----LSPNPAR-RALFIVYQTAVPYIAERISSRVASRGIMLADSLSDEF---------------------------------YGEIASGDASS-----QSLLTMEIQPSSTPGSASYTMRLRAKISRL----------WLRTVRCWPSVL-PLVREFLQLALRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPR--YQILGVFLLIQLCIIAA-------EGLRRSSLSSVSSSINPAS-------FGANPSSSGRGLPVLNEEGNLISVDGDSGNWVSDPSHSEFNTGSGIS-------KCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPINHSSLVCLY 393
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A1W0A079_9STRA (Peroxisome assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A079_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.180e-29 Identity = 117/429 (27.27%), Postives = 177/429 (41.26%), Query Frame = 1
Query: 34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGAR-----RVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWAR----RRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 1293
A QP V+L+ +D YY + LL + + + R M L PEL+ ++ LY GLT G QT+G+EYC I V G L A+ L PY+QER GW L+ G+ I+ + ET PT+ + + + ++++ S ++ R ++ + L LHLA FY +GR+ ++A R +G R R + P A++++LG L++++ A +A + R L + P S L V D + RVP P + P R+C+LC++ R + + TPCGH+FCWECI+GWCQ PECPLCRQ V PQ + C+Y Y
Sbjct: 9 APQPRVILAATKDDYYVSELLNQVHDVVEKVRFWGRPGSGSTPMSLDPELQLISKLLYLGLT---GSQTMGEEYCDIYRVQ-----GIMPKMLSTPSKAAWMLLSTVFPYVQERSHLGWANLQP-----GAAQCQLQQARLRARERLRLQGQQHTMISAPVTTEET----------------PTKLGLFLQR-----------------------LDDLVKKLKSMSKDFETRTGTSLQTWTQSFLVLHLAFFYLNGRYFDMAKRAMGIRYVLTR-KLTLPSAQFSILGYLIIIRLAMSSAMYLPQLL-------RLLLGVQSP---------------SPL---VHDNHVKARVPVDD---LPTNTDTIP--ARKCALCLTERSHPSMTPCGHVFCWECIIGWCQNKPECPLCRQQVQPQDVKCIYNY 354
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A1U8E1S1_CAPAN (peroxisome biogenesis factor 10 isoform X1 n=7 Tax=Solanoideae TaxID=424551 RepID=A0A1U8E1S1_CAPAN) HSP 1 Score: 129 bits (324), Expect = 1.690e-29 Identity = 126/438 (28.77%), Postives = 188/438 (42.92%), Query Frame = 1
Query: 34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLR---SLRD-PFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAM----SGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAA---------TASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
AAQP+++ + E+D YA+ + E + L G R + E + L LY+ LT AGKQTLG+EYC I V G SP P R + F + AVPY+ ER+ R G+ S+ D PFG + SS E + PT +++ S + + +R +A RR P++ +L+ +R +L FYF+G + +++ R G + +P + PR Y +LG+ LL+Q AA + SA + T R + P +E EG + E G A P ++G +P+ +C+LC+S+R++ ATPCGH+FCW CI+ WC PECPLCR PV S+VCLY
Sbjct: 30 AAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVAYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAGPYG----LSPTPAR-RALFIFHQSAVPYIAERVSSRVASRGITLADSMADYPFGD-------------------------VPTSSNEAEPS---------------PT---VEIQS----------YSTSTSSISALSLLKAKMRDFWLYAVRRWPSVLPLVREILQLVIRTNLMFFYFEGLYYHISKRAAGIHYVFIGKPMNQRPR--YQILGVFLLIQLCILAAEGLRRSSLSSVSASAQQAPFGTYRTSAGRGLPVLNE------EGNLITAESEKYGLVAEPTST-LESQGSSPS----------KCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 389
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A328E4H4_9ASTE (RING-type domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E4H4_9ASTE) HSP 1 Score: 129 bits (323), Expect = 2.520e-29 Identity = 127/437 (29.06%), Postives = 181/437 (41.42%), Query Frame = 1
Query: 34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAM----SGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGE-------------GPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
A QP+++ + E+D Y L+ E + L G R + E + L LYF LT AGKQTLG+EYC I V G P P R + F + VPYL ER R G+ +L DPF G + SSG E + T SS E + + LRR A +R P++ +L+ +R +L FYF+G + + + R G R + +Q R RY +LG+ LL+Q AA ER R ++ ++LS ++ G G S+ G V ++ + T G++ +C+LC+SNR++ ATPCGH+FCW CI+ WC PECPLCR P S+VCLY
Sbjct: 33 AQQPEIMRAAEKDDQYT-LLVYESCRDAFRHLFGTRVAVSYQNETKLLGQMLYFLLTTGAGKQTLGEEYCDITQVAGPFG----VPPTPAR-RALFIFYQTTVPYLAERFSSRLASEGI-TLDDPFDD-------------------DYSFGGASASSGRVEAST---------------TSETTSFSSRESLSFFSR--------------LKAKLRRCWLHAVQRWPSVFPLAREILQLIIRANLMFFYFEGLYYHSSKRASGIRYVFIG-KQANQRPRYQILGVFLLIQLCVLAA-------ERLRRSSLSSLSASVQQTPLGTYQYSPGNCVPILDEEGNLITGGSEKGSYVFQSSSTSEKQSQTSGQS------------KCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A0D2N4L4_GOSRA (RING-type domain-containing protein n=17 Tax=Malvoideae TaxID=214907 RepID=A0A0D2N4L4_GOSRA) HSP 1 Score: 128 bits (322), Expect = 3.240e-29 Identity = 121/440 (27.50%), Postives = 186/440 (42.27%), Query Frame = 1
Query: 13 DPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGV----LEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRR--------RCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
+P AAQP+++ + E+D YA+ + + + L G R + E + L LY+ LT +G+QTLG+EYC I V G SP P R + + AVPY+ ER+ R G+ +L D G+ +S +P+E+ VS+ + LR + A +R PA+ + L+W LR +L FYF+G + +++ R G R + +P + PR Y +LG+ LL+Q AA E R + ++++ ++S G + P+ G LP T AD + +C+LC+SNR++ ATPCGH+FCW CI+ WC PECPLCR P+ S+VCLY
Sbjct: 27 EPRRFPLAAQPEIMRAAEKDDQYASFVY-DACRDAFRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPHG----LSPTPAR-RALFIVYQTAVPYIAERISSRIASRGI-TLAD-------LQSDEFYSNSGSERSQVESSTGVEIS---------------------LPSESTASVSA--------------------LSRLKEKLRGMCLRAVQRWPAVLPIAREFLQWVLRANLMFFYFEGFYYHISKRAAGIRYVFIGKPSNQRPR--YQILGIFLLIQLCIIAA-------EGLRRSNLSSITSSIHQTS-----LGSHQNPTGQG-------LPLLNEEGNLIPTEADRGSWVGESTSESTGVVSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLY 390
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A6I9S4B6_ELAGV (peroxisome biogenesis factor 10 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S4B6_ELAGV) HSP 1 Score: 128 bits (322), Expect = 3.290e-29 Identity = 118/428 (27.57%), Postives = 176/428 (41.12%), Query Frame = 1
Query: 34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFL--RVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSR-----RRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
AAQP+++ + E+D +YA + + + L G R + E++ L LY+ LT AG+QTLG+EYC I V S G LP P + F+ +PYL ER+ R G+ FG + GS V ++AA SS V VL +AR +L+ A R +L FYF+G + +++ R G R + +P + PR Y +LG+ LL+Q A E R + ++++ ++S G G L E P + +G AD P + +C+LC+S R++ ATPCGH+FCW CI+ WC PECPLCR P+ S+VC+Y
Sbjct: 32 AAQPEIMRAAEKDDHYA-AFVHDACRDAFRHLFGTRMAVAYQSEIKLLGQTLYYLLTTGAGQQTLGEEYCDISQVASSHG-------LPPTPARRALFIVYETIIPYLAERISSRMAARGIILADSQFG--------------------------------------ELYGSDHPRRNQVQSSDAAE--SSNSTSVSISALSKFRERLHGLWLQAVQKWPTVLPYARE-------ILQLAFRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPLNQRPR--YQILGVFLLIQLCILGA-------EGLRRSNLSSITSSVHQTSPGGHHSSTGRGMPVLNE----DGNPVTNYSPDKGSWAADSLAVPEPQGSGGMSKCTLCLSTRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIY 391
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A2I4E0R6_JUGRE (peroxisome biogenesis factor 10 n=8 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4E0R6_JUGRE) HSP 1 Score: 128 bits (321), Expect = 5.390e-29 Identity = 123/456 (26.97%), Postives = 189/456 (41.45%), Query Frame = 1
Query: 4 EGADPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFL--RVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLS-------WARRRRPAM----SGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAA---------TASAETAERWRATARAALSERFPRSSETEAACGEGE---GPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
EG+ P AAQP+++ + E+D YA+ + E + L G R + E + L LYF LT +G+QTLG+EYC I V G LP P + F+ + AVPY+ ER+ R HG I ++ + A + + +++ T + S G +SF+RR+ +A +R P + VL+ LR +L FYF+G + +++ R G R + +P + PR Y +LG+ LL+Q AA + ++ + T R + + P +E EG ++ G V D++ A T +C+LC+SNR+ AT CGH+FCW CI+ WC PECPLCR P+ S+VCLY
Sbjct: 33 EGSIPRRFPLAAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVAYQSETKLLGQMLYFILTTGSGQQTLGEEYCDITQVSGPYG-------LPPTPARRALFILYQTAVPYIAERISSRAASHG-----------------------------------IVLADSQSDDAYNDSAPGSGHVQSLAETNLSSSTSRGS----------------------ISFVRRLKENLNRLWLYAVQRWPTVLPVAREVLQLVLRANLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPR--YQLLGIFLLIQLCIIAAEGLRRSNLSSIASSVHQTSFGTHRGSTVQGLPVLNE------EGNLISADNNKGSWVSDSSSTSESQATT-------------GISKCTLCLSNRQYPTATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLY 402
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: UPI001CB9C82D (peroxisome biogenesis factor 10 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C82D) HSP 1 Score: 127 bits (320), Expect = 5.900e-29 Identity = 121/432 (28.01%), Postives = 185/432 (42.82%), Query Frame = 1
Query: 34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFL--RVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSET--EAACGEG------EG---PSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
AAQP+++ + ++D YA+ + E + L G R + E + L LY+ LT AG+QTLG+EYC I V G LP P + F+ + AVPY+ ER+ G+A++ E+ +D ++ E+ + + I V S +V VL AR L+ LR +L FYF+G + +++ R G R + +P + PR Y +LG+ LL+Q AA E R + A+++ +S +A+ G G EG D G+G G + P + + G + +C+LC+SNR+N ATPCGH+FCW CI+ WC PECPLCR P+ ++VCLY
Sbjct: 33 AAQPEIMRAAQKDDQYASFVY-EACRDAFRHLFGTRAAISYQSETKLLGQMLYYILTTGAGQQTLGEEYCDITQVAGSYG-------LPPTPARRALFIVYQSAVPYIAERVSS---------------------------------RIASRGMALT----ESMSDDLDTFRSSSEDQL---SMIHVPSPSPRVSISPLSRLKEKIGGIWLHIVQRWPAVLPLARES-------LQLLLRANLMFFYFEGLYYHISKRAAGIRYVFIGKPMNQRPR--YQILGMFLLVQLCIIAA-------EGLRRSNLASITSSVQHTSLRVHQASGGRGLPVLNEEGNLITGDTGKGFGVSEAVPTSESQSSGIS------------KCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPLTHSTLVCLY 388 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1263.1 >prot_Ecto-sp6_S_contig11.1263.1 ID=prot_Ecto-sp6_S_contig11.1263.1|Name=mRNA_Ecto-sp6_S_contig11.1263.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=433bp MEGADPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMback to top mRNA from alignment at Ecto-sp6_S_contig11:867403..869990+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1263.1 ID=mRNA_Ecto-sp6_S_contig11.1263.1|Name=mRNA_Ecto-sp6_S_contig11.1263.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2588bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:867403..869990+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:867403..869990+ >mRNA_Ecto-sp6_S_contig11.1263.1 ID=mRNA_Ecto-sp6_S_contig11.1263.1|Name=mRNA_Ecto-sp6_S_contig11.1263.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1299bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:867403..869990+ (Ectocarpus species6 EcLAC_371)back to top |