mRNA_Ecto-sp6_S_contig11.1263.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig11.1263.1
Unique NamemRNA_Ecto-sp6_S_contig11.1263.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 651 bits (1679), Expect = 1.010e-231
Identity = 377/433 (87.07%), Postives = 382/433 (88.22%), Query Frame = 1
Query:    1 MEGADPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAA-DRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 1296
            MEG DP LLRYAAQPDVVLSQERDLYYAN LLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPL RRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGG       XXXXXXXXX     VGIAVSS SG TAA DRA                       XXXXXXXXXXXXXXXXXXXXX  +FLRRVL+WARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMR +GARLAYARPEQEA R RYAVLGLLLLLQAAAEAATASAETAERWRATARAALSE FPRS+E EA CGEG GPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMS+RENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA
Sbjct:    1 MEGGDPTLLRYAAQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.080e-52
Identity = 158/410 (38.54%), Postives = 194/410 (47.32%), Query Frame = 1
Query:   64 ERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 1293
            ERD YY   L  +G  ++ E+ +G RR  +LA EL  LA  LY GLT LAG+QT+GQEYC  DL+ S  G       +P      Y+ + V  PYL  R+  GW  LR +R+PF                            A ++     A           +N    +AA  V S  XXXXXXXXXXXXXXXXXXXXX                   + VL W    HLA F+ +GR+AN AMR    RL Y R  Q+AP  RY +LG+L+L +   E    +A                             +G+G               RVP  +   T A        R RC+LCM  RE+ AAT CGHLFCWECIVGWC+TNPECPLCRQP  PQSIVC+Y Y
Sbjct:    2 ERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYC--DLMFSRNG----LCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPP---------DNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRA-QDAPLPRYTILGVLMLARFGFEFGAQAARKLHG--------------------IIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAAR-----RHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A0A0L2W0_CUCSA (RING-type domain-containing protein n=13 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L2W0_CUCSA)

HSP 1 Score: 132 bits (333), Expect = 1.030e-30
Identity = 125/437 (28.60%), Postives = 189/437 (43.25%), Query Frame = 1
Query:   34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLR---SLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGV-------------GDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            AAQP+++ + E+D  YA+ +  +   +    L GAR  +    E + L   LY+ LT  +G+QTLG+EYC I+ V    G     SP P R    +   + AVPY+ ER+  R    G+    SL D F                                  GE A+  A S     ++++  E     + G                         +LR V  W     P +   L+ ALR +L  FYF+G + +++ R  G R  +  +P  + PR  Y +LG+ LL+Q    AA       E  R ++ +++S     +S        G  PS  G G+             GD+      P+ +   T + ++       +C+LC+SNR++  ATPCGH+FCW CI+ WC   PECPLCR P+   S+VCLY
Sbjct:   35 AAQPEIMRAAEKDDQYASFVY-DACRDAFRHLFGARLAVAYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDINQVSGPYG----LSPNPAR-RALFIVYQTAVPYIAERISSRVASRGIMLADSLSDEF---------------------------------YGEIASGDASS-----QSLLTMEIQPSSTPGSASYTMRLRAKISRL----------WLRTVRCWPSVL-PLVREFLQLALRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPR--YQILGVFLLIQLCIIAA-------EGLRRSSLSSVSSSINPAS-------FGANPSSSGRGLPVLNEEGNLISVDGDSGNWVSDPSHSEFNTGSGIS-------KCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPINHSSLVCLY 393          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A1W0A079_9STRA (Peroxisome assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A079_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.180e-29
Identity = 117/429 (27.27%), Postives = 177/429 (41.26%), Query Frame = 1
Query:   34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGAR-----RVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWAR----RRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 1293
            A QP V+L+  +D YY + LL +    + +     R       M L PEL+ ++  LY GLT   G QT+G+EYC I  V      G     L      A+  L    PY+QER   GW  L+      G+                         I+    + ET                PT+  + +                         +   ++++ S ++    R   ++    +  L LHLA FY +GR+ ++A R +G R    R +   P A++++LG L++++ A  +A    +         R  L  + P               S L   V D  +  RVP       P +    P   R+C+LC++ R + + TPCGH+FCWECI+GWCQ  PECPLCRQ V PQ + C+Y Y
Sbjct:    9 APQPRVILAATKDDYYVSELLNQVHDVVEKVRFWGRPGSGSTPMSLDPELQLISKLLYLGLT---GSQTMGEEYCDIYRVQ-----GIMPKMLSTPSKAAWMLLSTVFPYVQERSHLGWANLQP-----GAAQCQLQQARLRARERLRLQGQQHTMISAPVTTEET----------------PTKLGLFLQR-----------------------LDDLVKKLKSMSKDFETRTGTSLQTWTQSFLVLHLAFFYLNGRYFDMAKRAMGIRYVLTR-KLTLPSAQFSILGYLIIIRLAMSSAMYLPQLL-------RLLLGVQSP---------------SPL---VHDNHVKARVPVDD---LPTNTDTIP--ARKCALCLTERSHPSMTPCGHVFCWECIIGWCQNKPECPLCRQQVQPQDVKCIYNY 354          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A1U8E1S1_CAPAN (peroxisome biogenesis factor 10 isoform X1 n=7 Tax=Solanoideae TaxID=424551 RepID=A0A1U8E1S1_CAPAN)

HSP 1 Score: 129 bits (324), Expect = 1.690e-29
Identity = 126/438 (28.77%), Postives = 188/438 (42.92%), Query Frame = 1
Query:   34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLR---SLRD-PFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAM----SGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAA---------TASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            AAQP+++ + E+D  YA+ +  E   +    L G R  +    E + L   LY+ LT  AGKQTLG+EYC I  V    G     SP P R    + F + AVPY+ ER+  R    G+    S+ D PFG                          +  SS   E +               PT   +++ S                       + + +R    +A RR P++      +L+  +R +L  FYF+G + +++ R  G    +  +P  + PR  Y +LG+ LL+Q    AA         + SA   +    T R +     P  +E      EG   +   E  G  A P      ++G +P+          +C+LC+S+R++  ATPCGH+FCW CI+ WC   PECPLCR PV   S+VCLY
Sbjct:   30 AAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVAYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAGPYG----LSPTPAR-RALFIFHQSAVPYIAERVSSRVASRGITLADSMADYPFGD-------------------------VPTSSNEAEPS---------------PT---VEIQS----------YSTSTSSISALSLLKAKMRDFWLYAVRRWPSVLPLVREILQLVIRTNLMFFYFEGLYYHISKRAAGIHYVFIGKPMNQRPR--YQILGVFLLIQLCILAAEGLRRSSLSSVSASAQQAPFGTYRTSAGRGLPVLNE------EGNLITAESEKYGLVAEPTST-LESQGSSPS----------KCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 389          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A328E4H4_9ASTE (RING-type domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E4H4_9ASTE)

HSP 1 Score: 129 bits (323), Expect = 2.520e-29
Identity = 127/437 (29.06%), Postives = 181/437 (41.42%), Query Frame = 1
Query:   34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAM----SGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGE-------------GPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            A QP+++ + E+D  Y   L+ E   +    L G R  +    E + L   LYF LT  AGKQTLG+EYC I  V    G      P P R    + F +  VPYL ER   R    G+ +L DPF                          G + SSG  E +                T      SS E                     + + LRR    A +R P++      +L+  +R +L  FYF+G + + + R  G R  +   +Q   R RY +LG+ LL+Q    AA       ER R ++ ++LS    ++         G              G S+ G  V  ++      + T G++            +C+LC+SNR++  ATPCGH+FCW CI+ WC   PECPLCR P    S+VCLY
Sbjct:   33 AQQPEIMRAAEKDDQYT-LLVYESCRDAFRHLFGTRVAVSYQNETKLLGQMLYFLLTTGAGKQTLGEEYCDITQVAGPFG----VPPTPAR-RALFIFYQTTVPYLAERFSSRLASEGI-TLDDPFDD-------------------DYSFGGASASSGRVEAST---------------TSETTSFSSRESLSFFSR--------------LKAKLRRCWLHAVQRWPSVFPLAREILQLIIRANLMFFYFEGLYYHSSKRASGIRYVFIG-KQANQRPRYQILGVFLLIQLCVLAA-------ERLRRSSLSSLSASVQQTPLGTYQYSPGNCVPILDEEGNLITGGSEKGSYVFQSSSTSEKQSQTSGQS------------KCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A0D2N4L4_GOSRA (RING-type domain-containing protein n=17 Tax=Malvoideae TaxID=214907 RepID=A0A0D2N4L4_GOSRA)

HSP 1 Score: 128 bits (322), Expect = 3.240e-29
Identity = 121/440 (27.50%), Postives = 186/440 (42.27%), Query Frame = 1
Query:   13 DPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFLRVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGV----LEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRR--------RCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            +P     AAQP+++ + E+D  YA+ +  +   +    L G R  +    E + L   LY+ LT  +G+QTLG+EYC I  V    G     SP P R    +   + AVPY+ ER+  R    G+ +L D                            G+ +S                     +P+E+   VS+                       +   LR +   A +R PA+  +    L+W LR +L  FYF+G + +++ R  G R  +  +P  + PR  Y +LG+ LL+Q    AA       E  R +  ++++    ++S      G  + P+  G       LP          T AD   +             +C+LC+SNR++  ATPCGH+FCW CI+ WC   PECPLCR P+   S+VCLY
Sbjct:   27 EPRRFPLAAQPEIMRAAEKDDQYASFVY-DACRDAFRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPHG----LSPTPAR-RALFIVYQTAVPYIAERISSRIASRGI-TLAD-------LQSDEFYSNSGSERSQVESSTGVEIS---------------------LPSESTASVSA--------------------LSRLKEKLRGMCLRAVQRWPAVLPIAREFLQWVLRANLMFFYFEGFYYHISKRAAGIRYVFIGKPSNQRPR--YQILGIFLLIQLCIIAA-------EGLRRSNLSSITSSIHQTS-----LGSHQNPTGQG-------LPLLNEEGNLIPTEADRGSWVGESTSESTGVVSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLY 390          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A6I9S4B6_ELAGV (peroxisome biogenesis factor 10 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S4B6_ELAGV)

HSP 1 Score: 128 bits (322), Expect = 3.290e-29
Identity = 118/428 (27.57%), Postives = 176/428 (41.12%), Query Frame = 1
Query:   34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFL--RVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSR-----RRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            AAQP+++ + E+D +YA   + +   +    L G R  +    E++ L   LY+ LT  AG+QTLG+EYC I  V S  G       LP  P +   F+     +PYL ER+  R    G+      FG                                      +  GS       V  ++AA   SS                        V     VL +AR        +L+ A R +L  FYF+G + +++ R  G R  +  +P  + PR  Y +LG+ LL+Q     A       E  R +  ++++    ++S        G G   L E       P    +  +G   AD    P  +      +C+LC+S R++  ATPCGH+FCW CI+ WC   PECPLCR P+   S+VC+Y
Sbjct:   32 AAQPEIMRAAEKDDHYA-AFVHDACRDAFRHLFGTRMAVAYQSEIKLLGQTLYYLLTTGAGQQTLGEEYCDISQVASSHG-------LPPTPARRALFIVYETIIPYLAERISSRMAARGIILADSQFG--------------------------------------ELYGSDHPRRNQVQSSDAAE--SSNSTSVSISALSKFRERLHGLWLQAVQKWPTVLPYARE-------ILQLAFRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPLNQRPR--YQILGVFLLIQLCILGA-------EGLRRSNLSSITSSVHQTSPGGHHSSTGRGMPVLNE----DGNPVTNYSPDKGSWAADSLAVPEPQGSGGMSKCTLCLSTRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIY 391          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: A0A2I4E0R6_JUGRE (peroxisome biogenesis factor 10 n=8 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4E0R6_JUGRE)

HSP 1 Score: 128 bits (321), Expect = 5.390e-29
Identity = 123/456 (26.97%), Postives = 189/456 (41.45%), Query Frame = 1
Query:    4 EGADPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFL--RVAVPYLQERM--REGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLS-------WARRRRPAM----SGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAA---------TASAETAERWRATARAALSERFPRSSETEAACGEGE---GPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            EG+ P     AAQP+++ + E+D  YA+ +  E   +    L G R  +    E + L   LYF LT  +G+QTLG+EYC I  V    G       LP  P +   F+  + AVPY+ ER+  R   HG                                   I ++    + A + +       +++  T  +   S G                       +SF+RR+         +A +R P +      VL+  LR +L  FYF+G + +++ R  G R  +  +P  + PR  Y +LG+ LL+Q    AA         + ++   +    T R +  +  P  +E      EG      ++ G  V D++      A T                +C+LC+SNR+   AT CGH+FCW CI+ WC   PECPLCR P+   S+VCLY
Sbjct:   33 EGSIPRRFPLAAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVAYQSETKLLGQMLYFILTTGSGQQTLGEEYCDITQVSGPYG-------LPPTPARRALFILYQTAVPYIAERISSRAASHG-----------------------------------IVLADSQSDDAYNDSAPGSGHVQSLAETNLSSSTSRGS----------------------ISFVRRLKENLNRLWLYAVQRWPTVLPVAREVLQLVLRANLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPR--YQLLGIFLLIQLCIIAAEGLRRSNLSSIASSVHQTSFGTHRGSTVQGLPVLNE------EGNLISADNNKGSWVSDSSSTSESQATT-------------GISKCTLCLSNRQYPTATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLY 402          
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Match: UPI001CB9C82D (peroxisome biogenesis factor 10 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C82D)

HSP 1 Score: 127 bits (320), Expect = 5.900e-29
Identity = 121/432 (28.01%), Postives = 185/432 (42.82%), Query Frame = 1
Query:   34 AAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLPRRPLQAYTFL--RVAVPYLQERMREGWHGLRSLRDPFGSGGXXXXXXXXXXXXXXXXXXXXXVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGEXXXXXXXXXXXXXXXXXXXXXVVSFLRRVLSWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRTIGARLAY-ARPEQEAPRARYAVLGLLLLLQAAAEAATASAETAERWRATARAALSERFPRSSET--EAACGEG------EG---PSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLY 1287
            AAQP+++ + ++D  YA+ +  E   +    L G R  +    E + L   LY+ LT  AG+QTLG+EYC I  V    G       LP  P +   F+  + AVPY+ ER+                                        G+A++    E+ +D   ++    E+ +   + I V S                       +V     VL  AR         L+  LR +L  FYF+G + +++ R  G R  +  +P  + PR  Y +LG+ LL+Q    AA       E  R +  A+++     +S    +A+ G G      EG     D G+G G +   P   + + G +            +C+LC+SNR+N  ATPCGH+FCW CI+ WC   PECPLCR P+   ++VCLY
Sbjct:   33 AAQPEIMRAAQKDDQYASFVY-EACRDAFRHLFGTRAAISYQSETKLLGQMLYYILTTGAGQQTLGEEYCDITQVAGSYG-------LPPTPARRALFIVYQSAVPYIAERVSS---------------------------------RIASRGMALT----ESMSDDLDTFRSSSEDQL---SMIHVPSPSPRVSISPLSRLKEKIGGIWLHIVQRWPAVLPLARES-------LQLLLRANLMFFYFEGLYYHISKRAAGIRYVFIGKPMNQRPR--YQILGMFLLVQLCIIAA-------EGLRRSNLASITSSVQHTSLRVHQASGGRGLPVLNEEGNLITGDTGKGFGVSEAVPTSESQSSGIS------------KCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPLTHSTLVCLY 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU68_9PHAE1.010e-23187.07RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CLL0_9STRA6.080e-5238.54Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
A0A0A0L2W0_CUCSA1.030e-3028.60RING-type domain-containing protein n=13 Tax=Cucur... [more]
A0A1W0A079_9STRA1.180e-2927.27Peroxisome assembly protein n=1 Tax=Thraustotheca ... [more]
A0A1U8E1S1_CAPAN1.690e-2928.77peroxisome biogenesis factor 10 isoform X1 n=7 Tax... [more]
A0A328E4H4_9ASTE2.520e-2929.06RING-type domain-containing protein n=3 Tax=Cuscut... [more]
A0A0D2N4L4_GOSRA3.240e-2927.50RING-type domain-containing protein n=17 Tax=Malvo... [more]
A0A6I9S4B6_ELAGV3.290e-2927.57peroxisome biogenesis factor 10 n=2 Tax=Arecaceae ... [more]
A0A2I4E0R6_JUGRE5.390e-2926.97peroxisome biogenesis factor 10 n=8 Tax=Juglandace... [more]
UPI001CB9C82D5.900e-2928.01peroxisome biogenesis factor 10 n=1 Tax=Erigeron c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:867403..869990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score694.1
Seed ortholog evalue4.1e-197
Seed eggNOG ortholog2880.D8LAW2
Preferred namePEX10
Model size1448
KEGG koko:K13346
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0000209,GO:0000280,GO:0000910,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0006082,GO:0006464,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007049,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007286,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009062,GO:0009790,GO:0009791,GO:0009793,GO:0009853,GO:0009987,GO:0010154,GO:0010381,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016049,GO:0016054,GO:0016558,GO:0016567,GO:0016740,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019953,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040007,GO:0042579,GO:0042760,GO:0042886,GO:0043094,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0048137,GO:0048232,GO:0048285,GO:0048316,GO:0048468,GO:0048515,GO:0048588,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0055114,GO:0061458,GO:0061640,GO:0065002,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:0140013,GO:0140056,GO:0140096,GO:1901564,GO:1901575,GO:1903046,GO:1990351,GO:1990415,GO:1990429
Exons4
EggNOG free text desc.cAMP binding
EggNOG OGsCOG5574@1,KOG0317@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_006210.1
Cds size1299
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348781.0418093-CDS-Ecto-sp6_S_contig11:867402..8676161682348781.0418093-CDS-Ecto-sp6_S_contig11:867402..867616Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 867403..867616 +
1682348781.053636-CDS-Ecto-sp6_S_contig11:868195..8683351682348781.053636-CDS-Ecto-sp6_S_contig11:868195..868335Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 868196..868335 +
1682348781.0621367-CDS-Ecto-sp6_S_contig11:868622..8693211682348781.0621367-CDS-Ecto-sp6_S_contig11:868622..869321Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 868623..869321 +
1682348781.0703397-CDS-Ecto-sp6_S_contig11:869595..8698411682348781.0703397-CDS-Ecto-sp6_S_contig11:869595..869841Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 869596..869841 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348781.0797117-UTR-Ecto-sp6_S_contig11:869841..8699901682348781.0797117-UTR-Ecto-sp6_S_contig11:869841..869990Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig11 869842..869990 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1263.1prot_Ecto-sp6_S_contig11.1263.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig11 867403..869841 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig11.1263.1

>prot_Ecto-sp6_S_contig11.1263.1 ID=prot_Ecto-sp6_S_contig11.1263.1|Name=mRNA_Ecto-sp6_S_contig11.1263.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=433bp
MEGADPPLLRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVM
ILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLP
RRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGGAAALAAARAR
ARARAAVAPPVGIAVSSGSGETAADRAGSWEEEEENVVPTEAAIDVSSGE
SGGGARAPPLASRSARSSPPPVVSFLRRVLSWARRRRPAMSGVLEWALRL
HLAAFYFDGRFANVAMRTIGARLAYARPEQEAPRARYAVLGLLLLLQAAA
EAATASAETAERWRATARAALSERFPRSSETEAACGEGEGPSDLGEGVGD
TALPPRVPAATRGRTPADVALFPPSRRRCSLCMSNRENVAATPCGHLFCW
ECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA*
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mRNA from alignment at Ecto-sp6_S_contig11:867403..869990+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig11.1263.1 ID=mRNA_Ecto-sp6_S_contig11.1263.1|Name=mRNA_Ecto-sp6_S_contig11.1263.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2588bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:867403..869990+ (Ectocarpus species6 EcLAC_371)
ATGGAGGGTGCCGACCCGCCTCTCCTGCGGTATGCCGCTCAGCCCGACGT AGTATTATCTCAGGAGAGAGATCTATACTACGCGAACACGTTACTAGGTG AAGGTACATCGGAGCTGGCCGAGACGCTGTTGGGAGCTCGCAGGGTGATG ATACTCGCCCCCGAACTGAGGGCGCTTGCGTCTTGTCTATACTTCGGCCT CACTAACCTTGCAGGTATGACGCGAATCCAAGTTTTGTCATTGTAATGCT TGTCACATAACCAGTATACAATTGGCTGCTGGGTGGTACCTGACATGCAG ACTTGCAAAGATGCGTGCAGAATGGAAAAGCCGACGGGCAGTTGTGGACG TCGAAATGAAGACGATGTGCCGACGACACATCCGTAGGTCTCATGCCTTA TCGCCACACTAGCCGTTGCTCGAGTCTCACCCTCCGTTCAAGCGTCAAGT TGGCACTGGTCGATCTCGCCCACCGGATGCACGACTGGCTGCTGTTTCCG GTAGGAAAAGCTGCGCGCTATGCCAGACAGCAACACGGAGCGATGGACTG CCTCAGGTTGCAGTACCTGCCGTGTTCGAGGGTACTTGGCGACTTGGCGA GCAAAGCACATCAACACACACACATTGGTCAGCCGGTTAGAGTGGTCGAT GCCAATACTAAGAACACACACGCGCGCGCGTTAACCGTGTGGCCGCACCT CGGCCGGAAAGAGGAGGCTTTCATTCGTTGATCCACCCTAACGTGCGTCA TGTCACTGCGTATCCGATACCGCATGATGCTCAACGCCCGCAGGCAAGCA AACTCTTGGTCAGGAGTACTGCGGTATTGATCTGGTTCCCTCAGGCCGGG GCGGCGGCAGGGAGTCTTCCCCTCTCCCCAGGAGGCCGTTGCAAGCGTAC ACGTTTCTCCGCGTGGCTGTGCCGTATCTCCAGGTGAGGGTCCGATCGGG TCTAGCCATACATGACGACGAGGTACGCTTCAGCGGTCCCCATTCTAAGG CCAAAGTGTTGCATGTTCAACAGCAGTGAGAGTCTCGTGAGATGAAAGTT AGGGCATGCTCGCGCGCTTTCCACCGAGCTGACACTGAAATAATTACGCA CGGTCAGAAGAAGTTCTGTCTCGCCGCATTTTGTCGTCTACTTGTCCCCA CGCGCCTACATTTTTCTCGCCCCCACACTTGTCCTGCACACCCGGTTGGT CGCCTGCCTTGCCATCACAGGAACGCATGCGGGAGGGCTGGCACGGGCTA CGATCCCTGAGGGATCCCTTCGGGAGCGGCGGCGGAGCCGCTGCCCTGGC AGCGGCCCGCGCCAGAGCGCGCGCTCGGGCGGCTGTGGCACCGCCGGTCG GCATTGCCGTTTCCTCGGGGTCCGGCGAAACAGCAGCCGACAGGGCGGGG TCTTGGGAGGAAGAGGAGGAGAATGTGGTACCGACGGAAGCAGCGATCGA CGTTTCTTCCGGCGAAAGTGGCGGCGGGGCACGAGCACCGCCGCTCGCGT CGCGGAGTGCCCGCTCGTCGCCGCCACCCGTGGTGTCGTTTTTGCGGCGG GTCCTCTCCTGGGCAAGGCGAAGACGACCCGCGATGTCGGGGGTGCTGGA GTGGGCCCTGCGGTTGCACCTGGCCGCGTTTTACTTCGACGGGCGGTTCG CGAACGTGGCCATGAGAACCATCGGCGCGAGGCTCGCGTACGCTCGGCCA GAGCAAGAAGCGCCGCGCGCGCGCTACGCGGTGTTAGGGCTGCTCCTGTT GCTGCAGGCGGCGGCGGAGGCTGCCACGGCGAGTGCCGAGACAGCGGAGC GATGGAGGGCCACCGCGAGAGCGGCGTTGTCGGAGAGGTTTCCGAGGAGC TCGGAGACGGAAGCGGCCTGCGGGGAGGGAGAGGGCCCTAGCGACCTTGG GGAGGGAGTTGGCGATACGGTAAGAGTCTGAAGGTTCTATACCTATTGGG GTAACGCTGCCCATTGTATGTTGGACGTCGGCTCTTGAATTGTTTGTACC GATCGTGGTTTGATCGCTCTGGCCGTGGAGCTGCTTCGGAGACGAATGTG TGGCACAAGGCCGCCGAGCCTCGACCTTCGTTTTTCCGCTTGGCAACAGT ACGGGATGCAGCCAACAGCTATGACAACGCCCGATTCTCAACCCTTTCTA TTGGTTCCCCTCCCGTCCCTTCTGGTGCCCGACACGCTCGCAGGCGCTGC CGCCGCGAGTGCCGGCCGCCACGCGAGGGAGGACCCCGGCGGACGTAGCC CTGTTTCCTCCATCTCGCCGACGCTGCTCCCTCTGCATGTCAAACAGGGA GAACGTTGCGGCCACTCCATGTGGACACCTGTTCTGTTGGGAGTGCATCG TGGGGTGGTGCCAGACGAACCCGGAGTGCCCGTTGTGTAGGCAGCCCGTT GCGCCTCAGTCGATCGTGTGCTTGTACCAGTACGCGTGAGAGGATGGGAC GCGGGTCGGCCGCTTTGGCAGGGGCACCAAATTGAGGCCGGTAGGCCAGC CTTTTCGTGTGCAACGTACGTCAACGTCGAAGAATAGCGGGAGGATTTCT CGTAAATGTTTGTTTCTTTGTCTTAATTCTGTCTATTC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:867403..869990+

>mRNA_Ecto-sp6_S_contig11.1263.1 ID=mRNA_Ecto-sp6_S_contig11.1263.1|Name=mRNA_Ecto-sp6_S_contig11.1263.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1299bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:867403..869990+ (Ectocarpus species6 EcLAC_371)
ATGGAGGGTGCCGACCCGCCTCTCCTGCGGTATGCCGCTCAGCCCGACGT
AGTATTATCTCAGGAGAGAGATCTATACTACGCGAACACGTTACTAGGTG
AAGGTACATCGGAGCTGGCCGAGACGCTGTTGGGAGCTCGCAGGGTGATG
ATACTCGCCCCCGAACTGAGGGCGCTTGCGTCTTGTCTATACTTCGGCCT
CACTAACCTTGCAGGCAAGCAAACTCTTGGTCAGGAGTACTGCGGTATTG
ATCTGGTTCCCTCAGGCCGGGGCGGCGGCAGGGAGTCTTCCCCTCTCCCC
AGGAGGCCGTTGCAAGCGTACACGTTTCTCCGCGTGGCTGTGCCGTATCT
CCAGGAACGCATGCGGGAGGGCTGGCACGGGCTACGATCCCTGAGGGATC
CCTTCGGGAGCGGCGGCGGAGCCGCTGCCCTGGCAGCGGCCCGCGCCAGA
GCGCGCGCTCGGGCGGCTGTGGCACCGCCGGTCGGCATTGCCGTTTCCTC
GGGGTCCGGCGAAACAGCAGCCGACAGGGCGGGGTCTTGGGAGGAAGAGG
AGGAGAATGTGGTACCGACGGAAGCAGCGATCGACGTTTCTTCCGGCGAA
AGTGGCGGCGGGGCACGAGCACCGCCGCTCGCGTCGCGGAGTGCCCGCTC
GTCGCCGCCACCCGTGGTGTCGTTTTTGCGGCGGGTCCTCTCCTGGGCAA
GGCGAAGACGACCCGCGATGTCGGGGGTGCTGGAGTGGGCCCTGCGGTTG
CACCTGGCCGCGTTTTACTTCGACGGGCGGTTCGCGAACGTGGCCATGAG
AACCATCGGCGCGAGGCTCGCGTACGCTCGGCCAGAGCAAGAAGCGCCGC
GCGCGCGCTACGCGGTGTTAGGGCTGCTCCTGTTGCTGCAGGCGGCGGCG
GAGGCTGCCACGGCGAGTGCCGAGACAGCGGAGCGATGGAGGGCCACCGC
GAGAGCGGCGTTGTCGGAGAGGTTTCCGAGGAGCTCGGAGACGGAAGCGG
CCTGCGGGGAGGGAGAGGGCCCTAGCGACCTTGGGGAGGGAGTTGGCGAT
ACGGCGCTGCCGCCGCGAGTGCCGGCCGCCACGCGAGGGAGGACCCCGGC
GGACGTAGCCCTGTTTCCTCCATCTCGCCGACGCTGCTCCCTCTGCATGT
CAAACAGGGAGAACGTTGCGGCCACTCCATGTGGACACCTGTTCTGTTGG
GAGTGCATCGTGGGGTGGTGCCAGACGAACCCGGAGTGCCCGTTGTGTAG
GCAGCCCGTTGCGCCTCAGTCGATCGTGTGCTTGTACCAGTACGCGTGA
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