mRNA_Ecto-sp6_S_contig11.1231.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: D8LAS6_ECTSI (Flavin_Reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAS6_ECTSI) HSP 1 Score: 480 bits (1236), Expect = 4.460e-167 Identity = 246/263 (93.54%), Postives = 254/263 (96.58%), Query Frame = 1
Query: 1 MITTARRDWYAAVNAFVLLVLLGTFGEAFVVQSVAPSSSSSSRSTSERHRSSTGYHDPTEASSPNRGSTSSTGGSSSVSFLRATGGEAGDRALPSLTKHHAPPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQSAGDHDAIICRIGDIFGPDKDASSWLEVLESGHLREAGII 789
M+TTARRDW+AAVNAFVLLVLLGTFGEAFV QSVAPSSSSSSRSTSERHRSS+ HDPT ASSPNRGSTSSTG S SVSFLRAT GEAGDRALPSLTKHHAPPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENF+REGWGV+QLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQSAGDHDAIICRIG+IFGPD+ ASS LEVLESGHLR+AGII
Sbjct: 1 MMTTARRDWHAAVNAFVLLVLLGTFGEAFVAQSVAPSSSSSSRSTSERHRSSSRCHDPTGASSPNRGSTSSTGRSGSVSFLRATEGEAGDRALPSLTKHHAPPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFVREGWGVMQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQSAGDHDAIICRIGNIFGPDEAASSRLEVLESGHLRKAGII 263
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A7S2E2S7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2E2S7_9EUKA) HSP 1 Score: 146 bits (368), Expect = 2.640e-37 Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1
Query: 301 APPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPS------CMNVAIIPGCGSYVTLHMVSK-QSAGDHDAIICRIGDIFGPDKDASSWLEVLESGHLREAGII 789
APP L+ PVFSL+T+N DG+TNM I+TYA+PVGI P+R W VSL++ TL++ NF ++ G+LQ+L HA +V LG G D+DKA CA F W +P + ++PGC Y+ L V + Q G+HD IC + D+ G + L + HLRE G+I
Sbjct: 50 APPLLNSPVFSLSTLNADGTTNMQILTYATPVGIGPKRTWGVSLYRPTLTHANFCKQRSGILQVLCEPHAAIVFALGGKSGNDSDKAAACAAAGFEWIKPPESWGGPTRSPLLLPGCSRYLRLSQVGELQPCGEHDLAICAVEDMLGLPPEDELRAVALSTAHLRELGLI 219
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A7S2RNZ4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNZ4_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.570e-37 Identity = 76/182 (41.76%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 298 HAPPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPW---------DEPSCMNVA--IIPGCGSYVTLHMVSKQ--SAGDHDAIICRIGDIFGPDK-----DASSWLEVLESGHLREAGII 789
++PP + VP ++LATV DG+TNMNI+TYA+P+ I P+R+W + LFK TLS+ENF R G +LQLL +H+ LVP LG + GRD DK + FPW DE + ++PGC Y+ L +V + AG HD +C++ ++F D AS+ L + LRE GII
Sbjct: 26 NSPPLIDVPTYALATVCRDGTTNMNILTYATPISIRPDRIWSIGLFKGTLSHENFQRTGRAILQLLDESHSKLVPSLGGTCGRDVDKRAESEKLNFPWVKLPNSSENDEKDELQQQPLVLPGCPHYIVLSLVDGKLIDAGSHDVALCKVDEMFVSDDCELDDTASTKASYLSTNRLREKGII 207
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A7S4PWJ3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PWJ3_9DINO) HSP 1 Score: 142 bits (358), Expect = 1.940e-35 Identity = 78/173 (45.09%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 286 LTKHHAPPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDT--DKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQS-AGDHDAIICRIGDIFGP---DKDASSWLEVLES-GHLREAG 783
L H APP L+VPV+SLAT++ G TNMNI+TYASPVGI P R W +SL++ T S+ NFI GVLQLL +HAPLV +LG D DKA C + F W + ++P C +Y+ L + + + AGDHD ICR+ I P D +AS + L + G + E G
Sbjct: 78 LESHDAPPLLNVPVYSLATLDSTGKTNMNILTYASPVGIRPARAWCISLYRKTQSHRNFIERRSGVLQLLGESHAPLVYLLGGQSSEDAGVDKAEGCRAEGFEWVSQEGVEEMLLPRCRAYLRLVLEGEVTDAGDHDVAICRLDQILYPVHEDMEASMGTDFLRARGLVSEVG 250
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A8J2SL81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL81_9STRA) HSP 1 Score: 142 bits (357), Expect = 6.080e-35 Identity = 78/163 (47.85%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 307 PALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQ-SAGDHDAIICRIGD-IFGPDKDASSWLEVLESGHLREAGII 789
P L PV+SLAT++E G TNMN+VTYA+PVGI PER W +SLFKST+S NF R GVLQLL+ HAPLV LG + D DKA C F W E S + ++P C +YV+L V + GDH+ +CR+ D + G D ++ +G LRE G+I
Sbjct: 58 PLLDGPVYSLATLDEAGDTNMNVVTYATPVGIRPERRWALSLFKSTVSRANFARRRRGVLQLLRPEHAPLVYALGGTSAADADKAAACYGAGFAW-ESSDWDERVLPRCAAYVSLEAVGEPVDCGDHEVYVCRVVDGVAGFDASHAT------TGDLRERGLI 213
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A7S0HHD5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHD5_9EUKA) HSP 1 Score: 137 bits (346), Expect = 1.480e-34 Identity = 78/177 (44.07%), Postives = 103/177 (58.19%), Query Frame = 1
Query: 280 PSLTKHHAPPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRD--TDKAGRCAEQAFPWDEPS-CMNVAIIPGCGSYVTLHMVSKQ-SAGDHDAIICRIGDIFGP---DKDASSWLEVLESGHLREAGII 789
P+L APP LS PVFSLAT+ DG T+MN++TYA+P+ + PERLW +SLF+ T S+ N+ R G GVLQ L HAPL LG + D DKA CA + W E C ++PGC +YV L + AG H+ IC++ FG D+ A+ L L + LR AG+I
Sbjct: 17 PALVPVEAPPLLSSPVFSLATLGADGRTSMNMLTYATPISVRPERLWAISLFRDTQSHANWQRRGTGVLQQLSAEHAPLTSALGGTSSADEGVDKAAACAVLGWEWSEGGECGEEQLLPGCLTYVRLVQQGELIDAGGHEVAICKLERTFGQAEADEPAARGL-ALSTAELRRAGLI 192
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A7S4NG52_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NG52_9EUKA) HSP 1 Score: 134 bits (338), Expect = 2.140e-33 Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 301 APPALSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSK-QSAGDHDAIICRIGDIFGPDKDASSWLEVLESGHLREAGII 789
APP L+ PVF+LATV+ G+TNMNI+TYA+PVGI P R W++SLF+ T ++ NF R GVLQLL+ HA LV LG S RD DK C E F W + ++P C +Y L + +AG+HD +C + +F PD D L++ R G++
Sbjct: 23 APPPLNNPVFALATVDATGATNMNILTYATPVGIGPRR-WVISLFRKTETHGNFCRRRTGVLQLLRPCHAALVHTLGGSSARDVDKETACRELGFEWARFDGHDELLLPDCAAYYRLTLDGDVTNAGEHDVALCLLDGVFVPDADVGPADAALDTRECRALGLV 185
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: B7G584_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G584_PHATC) HSP 1 Score: 134 bits (337), Expect = 6.100e-33 Identity = 76/187 (40.64%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 283 SLTKHHAPPALSVPVFSLATVNEDGS--------TNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPW---DEPSCMNVAI--IPGCGSYVTLHMVSKQSAGDHDAIICRI-----GDIFGPDKDASSWLEVLESGHLREAGII 789
S T+ PP L PVFSLATV+ DG+ TNMNI+TYA+PV + P+RLW++ L+K T++Y+NF+ G LQLL+ HA L+P+LG GRDTDK C F W + S N +P C Y+ L V AG HD IC++ + D+D+ + L + LR GII
Sbjct: 29 SFTETLKPPLLDSPVFSLATVSPDGTLSTASPSTTNMNILTYATPVSMSPDRLWVIGLYKGTVTYDNFVASRRGTLQLLRPEHATLIPVLGGKSGRDTDKYNACKSLGFSWVASEMQSANNEEPWRLPSCSCYLQLECVELCEAGSHDVAICKVVGMQTDNSSNDDEDSGTRGTHLGTQALRSMGII 215
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: A0A7S2V2S1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2S1_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.700e-30 Identity = 72/195 (36.92%), Postives = 102/195 (52.31%), Query Frame = 1
Query: 265 GDRALPSLTKHHAPPALSVPVFSLATVNEDGS-TNMNIVTYASPVGIEP--------------ERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMN-----VAIIPGCGSYVTLHMVSKQSAGDHDAIICRIGDIFGPDKDASSWLEVLESGHLREAGII 789
GD + P L++ PP LSVPVFSLAT+N TNMNIVTYA PVG E+ W++SL++ TLS+ NF+ GWGVLQ+L + P+V +LG+ G DK F W + V ++ GC +Y+T+ + + AGDHD + C + FG + VL + LR+ I+
Sbjct: 73 GDLSFPLLSRTTGPPPLSVPVFSLATINPSTKKTNMNIVTYACPVGTTTSSAAGEEGSGAGAGEKRWVLSLYRGTLSHRNFMESGWGVLQVLTKKQTPVVNLLGKQTGSKVDKRELSKVMGFEWTPFKGLRAPYDQVELMRGCAAYLTVKKIDRLDAGDHDVVFCHMDGSFGCEFMEGPSDPVLYTNQLRKLNIL 267
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Match: B8BV75_THAPS (Flavin_Reduct domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV75_THAPS) HSP 1 Score: 123 bits (308), Expect = 6.980e-29 Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = 1
Query: 304 PPALSVPVFSLATVN----EDGST---NMNIVTYASPVGIEPERLWMVSLFKSTLSYENFIREGWGVLQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMN----------VAIIPGCGSYVTLHMVSKQ-SAGDHDAIICRIGDIFGPD--KDASSWLEVLESGHLREAGII 789
PP + VP +SL+T+ +DGS+ MN++TYA+P+ I+P R+W +SL+K T+++EN+ RE GVLQLL HA L+ LG S GRD DK CA+ F W+ ++ ++P C Y+ L MV G H+ +CR+ + D + A+ L+ L + LRE GII
Sbjct: 27 PPLIDVPTYSLSTLGVDNGDDGSSVTSTMNVLTYATPISIQPFRMWSISLYKGTITHENWTRERRGVLQLLGPCHAELIRTLGGSSGRDVDKRAICAQLGFDWESLDVLDGEESDERVQWPLVLPSCLYYLQLEMVGDLIDCGSHEVALCRVVKMIADDGVQVAADELDCLNTRKLREMGII 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1231.1 >prot_Ecto-sp6_S_contig11.1231.1 ID=prot_Ecto-sp6_S_contig11.1231.1|Name=mRNA_Ecto-sp6_S_contig11.1231.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=264bp MITTARRDWYAAVNAFVLLVLLGTFGEAFVVQSVAPSSSSSSRSTSERHRback to top mRNA from alignment at Ecto-sp6_S_contig11:599571..603535- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1231.1 ID=mRNA_Ecto-sp6_S_contig11.1231.1|Name=mRNA_Ecto-sp6_S_contig11.1231.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3965bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:599571..603535- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:599571..603535- >mRNA_Ecto-sp6_S_contig11.1231.1 ID=mRNA_Ecto-sp6_S_contig11.1231.1|Name=mRNA_Ecto-sp6_S_contig11.1231.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:599571..603535- (Ectocarpus species6 EcLAC_371)back to top |