mRNA_Ecto-sp6_S_contig11.1222.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig11.1222.1
Unique NamemRNA_Ecto-sp6_S_contig11.1222.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI)

HSP 1 Score: 835 bits (2157), Expect = 2.130e-305
Identity = 426/432 (98.61%), Postives = 427/432 (98.84%), Query Frame = 1
Query:    1 MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYPCAGNGXXXXXXXXXXXX--GQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG 1290
            MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSG+CAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDE SGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEK AVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFY CAGNGXXXXXXXXXXXX  GQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG
Sbjct:    1 MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDEKSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYSCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG 432          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A835YNR1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR1_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.940e-61
Identity = 168/495 (33.94%), Postives = 212/495 (42.83%), Query Frame = 1
Query:   40 LAACFNDKRCHRRLIGHRARTFDFQFHPT-EDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGI--------RHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMC--------------------------LLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGE-RNPDDLAFVFDAKPRPGSGSS-----VLAVALSDGTVRVGDVLQQGEKTAV----------------LRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG---------------------------HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDAT----APLATLSVEE-------------------GFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPI 1203
            LA  + D+   ++L+GH+ R FDFQFHPT    A S SEDGT RVWD+  G    S +G   K EVLR CWAPPG     + +A+GSADG+VRLW +        R   GRD +S      +L+ V  L  +  A G DGQVY+  FI    GG+                                   L+ A+D +V LWDV T       A S    H+ GG  RNPD+  FVFDAK   GSG S      LA ALSDGTVRV  +  +   + +                       HLT++AW+ DG+ LA+CG    + VWD RTWT R+ L                             HSRPVYG  F   A                    PQLLLSWSSD T+ AWD G A  D      APL   S                       +P+  C+++ D     +AGG    + A   GVP+
Sbjct:   24 LATRWRDQSRRKQLLGHKGRVFDFQFHPTVHSRAASCSEDGTVRVWDVQRGVSIASAKG--SKDEVLRICWAPPGTPG--IDLASGSADGLVRLWAMSAATSTATRGAPGRDGSSAA----ALRCVKTLDVKAAAGG-DGQVYALQFIGADGGGSSSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLMVAADDAVSLWDVGTGVVTRRWAFSSSAQHAHGGAARNPDNQVFVFDAKVCCGSGGSGGGDGTLAAALSDGTVRVQPLDSELPASTLHPCGSGSNSGXXXXXXXXXXXXAHLTAVAWAPDGSALAACGXXXGVEVWDARTWTRRAALQAQALAVSVRERLRCAANTQYGDHLPAAAHSRPVYGVMFCASA--------------------PQLLLSWSSDGTLKAWDWGAAANDMNGGDFAPLQQRSTAAQLVDVMRITCQHREVLSSGDYPILHCALARDASSVVVAGGDSGARGAAMTGVPV 489          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S2S0D4_9STRA (Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0D4_9STRA)

HSP 1 Score: 204 bits (519), Expect = 8.440e-58
Identity = 146/415 (35.18%), Postives = 205/415 (49.40%), Query Frame = 1
Query:   73 RRLIGHRARTFDFQFHPTEDAAIS-ASEDGTARVWDLSSG--RCAKSLEGHNKKHEVLRACWAPPG-----------AANDSVS---VATGSADGIVRLWGIR-HGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVE-TRKRVSSRALSKVGAHSI------GGERNPDDLAFVFDAKPRP-GSGSSVLAVALSDGTVRV----GDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEG--FPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
            R L+GH++R FD  F P   + ++ ASED TARVW   +    C  +L GH+   EVLR  WAPP            A  DS +   + TG ADG VR+W +   G   +E + +D                  G D QVYSC F    +GG  P       ++ A+ S V+LWD++ T    + R +++    S+      GGERN     +VFD +    G+  +++A ALSDG+ R+    G  + Q      L      H+TS++W+ DG  LA   G+G+I +WDTRTW +R VL G H RPV+GA F+P +                    P  L+SWSSD ++ AW+T  +  D  APL+  S  EG  +P+ SC  S+ G    +AGG G   S  FLG P+ L DL
Sbjct:   36 RALLGHKSRCFDCHFQPGSRSLVATASEDCTARVWQAGASGYSCLATLRGHSS--EVLRVSWAPPSLSAGLSMAAGSAGTDSEAAHVLCTGGADGAVRVWKVAVDGTAHEEVALLDH-----------------GEDNQVYSCLFTDSIAGGGAP------VVIAAAGSKVNLWDLDATSAPATGRLIAEWEYASLPSGQVYGGERNAAQENYVFDLQISSLGASHTLIAAALSDGSTRITGGHGGAVHQN--VVALTTSDMVHVTSVSWAADGLSLACSRGDGSIVIWDTRTWRSRGVLQGGHQRPVFGAKFHPAS--------------------PHFLVSWSSDGSMGAWNTSVSAEDMDAPLSMFSTREGADYPILSCDFSSAGDALLIAGGSGSGNS--FLGTPVWLHDL 401          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S2CQ19_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQ19_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.550e-38
Identity = 104/285 (36.49%), Postives = 141/285 (49.47%), Query Frame = 1
Query:  415 AKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVE----TRKRVSSRALSKVGAHSI--GGERNPDDLAFVFDAK---PRPGSGSSVLAVALSDGTVRVGDVLQQG----EKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEE---GFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
            A G D QVYSC FIP+ S            L+TA++S+V  WD+     + +  S+ +   +G  +   G +RNP++  FVFD +   P  G  + + A ALSDGT RV   L  G       A L       L+++ WS DG  LA+  G+G++ VWD+RTW  R+VL G HSRP YG+ F+P                      P LLLSWSSD T+  WD+ R              +     +P+  C+ S DGR   +AGG G   S  FLGVP+ LVDL
Sbjct:    8 AHGKDAQVYSCGFIPETS-----------FLITAAESTVRCWDLRVGSSSEEPTSAWSYDSIGRTTPYGGAQRNPNNENFVFDIRVSPPATGGVNRLFAAALSDGTARVSAGLHAGGVSPTSVADLSLNDGVMLSAIEWSPDGRSLAASRGDGSLLVWDSRTWKCRAVLAGAHSRPCYGSVFHPH--------------------DPALLLSWSSDGTIALWDSLRTERPEPIHYGLTPHQADSPSYPILRCAWSPDGRSLVVAGGDGSG-SMSFLGVPVWLVDL 260          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 6.910e-32
Identity = 126/418 (30.14%), Postives = 177/418 (42.34%), Query Frame = 1
Query:   52 FNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPP---GAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVL----AVALSDGTVRVGDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLS--------DEARAKDGKESF 1257
            +N     R   GH  R FD      +   ++ASEDGTA+VW L+ GR    +     K EVLR  WAPP    AA  S+ +A   ADG   LW              D + + K + +L H  +      QVY C +       +    A    LLTA+ ++V  WDV   K +   +  +             D A+VFD +P P      L    A A+SDGT RV DV    +   VLR   D+ +T++ W   GT +ASC G+G   VWD RTW     L G H+ P YGAA                          + L  WS ++ +   D   AT  ATAP+ T +     P++ C+ S+      + GG G +  A  +   + + DLS        ++A  K  +ESF
Sbjct:    7 YNINAKQREFAGHTGRVFDVDLGQ-DGLCVTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASL-LAVAGADGFCNLWR------------GDDWSAPKSLQRLDHGGD------QVYGCAW-------SACGDAYGAWLLTAAGAAVRTWDVNAGKSIKQWSYQEPRG----------DQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDVRLDYD-ARVLRAPGDSKVTAVGWLG-GTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAA---------------KTDGFVASWAAEGLAFWSCEDALRKAD---ATKKATAPI-TDAAGNAVPLFQCAFSSS--NIVVCGGAGGKGDA--IVPSVFVYDLSKKRSRGDEEDASEKRPRESF 362          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S1ZZE4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZE4_TRICV)

HSP 1 Score: 103 bits (258), Expect = 7.480e-21
Identity = 127/429 (29.60%), Postives = 172/429 (40.09%), Query Frame = 1
Query:  127 EDAAI--SASEDGTARVW--DLSSGR--CAKSLEGHN-KKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDG-QVYSCHFIPDPSG-GAPPSSAAAM---CLLTASDSSVHLW-------------DVE-----------------------------------TRKRVSSRALSKVGAH----SIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLR-GVTDTHLTSLAWSDDGTVLASCGGNGTITVW-----DTRTWT---ARSVLWG---HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAG 1185
            +DA +  SA  DG  +VW  D ++G+  C  +L+ H  KK    R     P A                          R E  G+D   +           E +G +  QVY+  F+ D  G G P  + A M    LLT+SD  VHLW             D E                                    +KR  SR     GA     + GG+RNPD+L FVFDA   P +G  +L  ALSDGT+R+  V  +G   ++L+      H+TSLAW + GT LAS      + +W     D R W      +VL G   + RPV+GA +  C G               QD    LLLSW  D  +C WD  R+TG   +PL+ L  +  FP+Y+  V     R     GG D+ + G
Sbjct:   16 DDAPLLASAGADGVVKVWRHDEAAGKWICVSTLDHHKMKKRTAARRSGGEPDAPM------------------------RSEDDGMDDEGN----------EEGEGTEPPQVYALAFVEDWCGPGNPHQAGAGMGEDLLLTSSDDYVHLWRPTMGGGGENVLRDAEGGGAKMRLDRRMALRFGHMHEANWGVSAQVDGASWPKKRSRSRDDDSSGAQQQPRAFGGDRNPDNLVFVFDASFCPSNG--LLGAALSDGTLRL--VNGRGVCVSLLQLPGCRAHITSLAWDETGTRLASTIATSHVILWTVDGGDGRGWPRSGCAAVLEGGHDYGRPVFGAKY--CGG-------------PNQD----LLLSWGVDGKMCVWDA-RSTGQIRSPLSILVSDGSFPLYAVDVR---ERHETTPGGVDDDAQG 383          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S1DA97_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA97_CYCTE)

HSP 1 Score: 102 bits (253), Expect = 1.140e-20
Identity = 92/309 (29.77%), Postives = 132/309 (42.72%), Query Frame = 1
Query:  505 LLTASDSSVHLWDVETRKRVSSRALSKV-----------------------------------------GAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAV----LRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWD----------TRTWTARSVL-WGHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVE-EGFPVYSCSVSADGR-----------RFALAGGGGDEKSAGFLGVPIKLVDLS 1221
            L+T+SD  +HLW+++      S  L++V                                         G    GGERNPD+L FVFDA   P SG  +L  ALSDG+VR    L  G    V    L G   +H+TS +W   GT LASC   G + +W+          + T    +VL  GH   RP++GA +  C G                    +LL+SW  D  +C WD+ R+ G+  APL TL  + + +P+Y+  +   G            R A+ GG    +  GFLG+P+ L D++
Sbjct:   14 LMTSSDDFLHLWEIDEPSTEESWELTEVMSIRFTPMETFGYGVTVCRITGKGLDIPGGWSSSRASPGGDGGVGYGGERNPDNLVFVFDASYCPSSG--LLGAALSDGSVR----LMNGRGVCVSILTLPGC-QSHMTSFSWDSSGTRLASCVATGHLILWEIDLAGYSYRGSVTPACMAVLEGGHQVGRPLFGAQY--CGGK-----------------EEELLVSWGIDGRLCLWDS-RSQGNIGAPLNTLVAKNDDYPIYAIDMFHGGXXXXXXXXXEVSRMAVGGG----REGGFLGIPLYLYDIT 291          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S1VKZ2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKZ2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.320e-20
Identity = 112/452 (24.78%), Postives = 174/452 (38.50%), Query Frame = 1
Query:  145 ASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPD----PSGGAPPSSAAAMCLLTASDSSVHLWDVETRKR----------VSSRALSKVGA-------------------------------------------------HSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLW----------GHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVS-------------------ADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
            + E+   RV   SS   ++ L+   K+H+ L A     G A+  V V + S+D          G  + +      + SL++  +    + ++    Q+Y   FI D      GG    S     LLT+S+  VHLW++E  +           +   +L  VG                                                     GGERNP+++ FVFD    P +G  +  VALSDG++R+ +          L G   +HLTSLAW   G  LASC   G + +WD    TA S  W          GH+  RP+YGA +    G G                   L+LSW +D  +C WD   + G+  AP++ L  +  +P ++  V+                   +DG  +++  G G  +  GFLG+P  + D+
Sbjct:  104 SKENEVLRVAWASSAWASRDLKRGPKQHQHLIAS----GGADGVVKVWSLSSDAA--------GSAKWKCVATLDHSSLELRPKPATNDGSEPDPPQIYGLQFIDDWKGVGGGGCNDDSHTNSFLLTSSEDFVHLWEIENVQNGKVFFIEVLSIRFTSLYDVGYGVSLFPVTSNGIDITSNKENMDAAAAPQTIDLSNPVDPATVLNPEQEQNQPFGGERNPENIIFVFDVSYCPANG--ITGVALSDGSLRLVNGRGVAVAALTLPGC-QSHLTSLAWDSTGNRLASCVATGHVILWDLHLGTADSHEWRPSCRAVLEGGHTLGRPLYGAKY---CGEG------------------NLILSWGADGKICLWDA-HSLGNIQAPISVLLSKPDYPFFAVDVATKTTSNVGKSADAKNSNEKSDGDGYSVMVGAGGGREGGFLGLPTYIYDV 518          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S4AKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKL3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.610e-20
Identity = 99/333 (29.73%), Postives = 142/333 (42.64%), Query Frame = 1
Query:  271 DSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIP--DPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLR-GVTDTHLTSLAWSDDGTVLASCGGNGTITVWD------------TRTWTARSVLWGHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
            D  S    S+D  + LW I       E   +D  Q L + GQ  H  + K    +V S +F P  D S G    S     L           D+      SS A  K G+ + GGERNP +  FVFDA   PGSG  +L VALSDG++R+  V  +G   +V++   + +HLTS  W   G  LA+C G G +  W             T          GH   RP++G+ F  C G                     LL+SW  D  +C W + +A+G+   P+A L  +  +P+++  +S   R   + GG       GF+GVP+    +
Sbjct:  388 DQNSFLMTSSDEFIHLWEI-------ERHPLD--QQLSLDGQKIHLLQEKIKLKEVLSLYFGPLDDHSYGVTACSITGEGL-----------DLPAPPTKSSEA--KDGSVAFGGERNPSNTIFVFDAAYSPGSG--LLGVALSDGSLRL--VNGRGYCISVIQLPGSKSHLTSFCWDATGNRLATCVGTGHLITWSLDPESHDKGNYHTAATCTAIFEGGHQSGRPLFGSRF--CGGE-----------------DENLLISWGIDGKLCLWHS-KASGNIYDPVAILKDDGSYPIFAVEISRSERNLVVGGG----SEGGFIGVPLHFYSI 670          
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S4VLI3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLI3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.970e-18
Identity = 97/360 (26.94%), Postives = 151/360 (41.94%), Query Frame = 1
Query:  295 SADGIVRLWGI----RHGDGRDE-TSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWD--VETRKRVSSRALSKVGAHSIG--------GERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLR-GVTDTHLTSLAWSDDGTVLASCGGNGTITVW-----DTRTWTARSVL----WGHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSC-------------SVSADGRRF-----ALAGGGGDEKSAGFLGVPIKLVDLSDEARAK 1239
            S+D  + LW +    + GD ++E  +   +  +L +V +L      KG  G V+                             VHL D  V+  ++  S        H IG        G+RNPD+L +VFDA     S + +L VALSDGT+R+  V  +G   ++L+     +HLTS AW   G  LASC   G + +W     D + W   S L     GH   RP++GA +  C                      +L++SW  D  +C WD+  + G   +P+A L     +P+++              +V A+   +     A+AGG    +  GFLG+P+ L D+    RA+
Sbjct:   40 SSDDFIHLWELLPCQKQGDNKEEGKTATTKEVNLSIVMKLHFTGLEKGYGG-VF-----------------------------VHLADSLVDRLRKTKSNEAEVCSNHMIGRGDNFVFGGDRNPDNLTYVFDASHC--SSNDLLGVALSDGTLRL--VNGRGVCVSILQLPGCSSHLTSFAWDKSGMRLASCVATGHLILWSIDLGDGKGWVMPSCLAVLEGGHQPGRPLFGAKY--CGSENE-----------------ELIMSWGVDGRLCLWDS-HSFGQIHSPMAILVDRSDYPIFAVDKLEIVRKSKANGNVGANENGYDISCIAVAGG----RDGGFLGIPVYLYDVKRHKRAQ 341          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSW0_ECTSI2.130e-30598.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNR1_9STRA1.940e-6133.94WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2S0D4_9STRA8.440e-5835.18Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=103... [more]
A0A7S2CQ19_9STRA4.550e-3836.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4E2U9_9STRA6.910e-3230.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1ZZE4_TRICV7.480e-2129.60Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1DA97_CYCTE1.140e-2029.77Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1VKZ2_9STRA1.320e-2024.78Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4AKL3_9STRA3.610e-2029.73Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4VLI3_9STRA2.970e-1826.94Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:548052..550424 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score839.3
Seed ortholog evalue7.8e-241
Seed eggNOG ortholog2880.D7FSW0
Model size1293
KEGG koko:K01265,ko:K11797
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.transcription initiation from RNA polymerase II promoter
EggNOG OGsCOG2319@1,KOG0263@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-27_006570.1
EC3.4.11.18
Cds size1293
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348777.6279578-CDS-Ecto-sp6_S_contig11:548051..5492301682348777.6279578-CDS-Ecto-sp6_S_contig11:548051..549230Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 548052..549230 -
1682348777.6404443-CDS-Ecto-sp6_S_contig11:550310..5504241682348777.6404443-CDS-Ecto-sp6_S_contig11:550310..550424Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig11 550311..550424 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1222.1prot_Ecto-sp6_S_contig11.1222.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig11 548052..550424 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig11.1222.1

>prot_Ecto-sp6_S_contig11.1222.1 ID=prot_Ecto-sp6_S_contig11.1222.1|Name=mRNA_Ecto-sp6_S_contig11.1222.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=431bp
MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISAS
EDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSA
DGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCH
FIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHS
IGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAV
LRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRP
VYGAAFYPCAGNGGGGAAAAAATTSGQDCPPQLLLSWSSDETVCAWDTGR
ATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVP
IKLVDLSDEARAKDGKESFADNGSNEPAQG*
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mRNA from alignment at Ecto-sp6_S_contig11:548052..550424-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig11.1222.1 ID=mRNA_Ecto-sp6_S_contig11.1222.1|Name=mRNA_Ecto-sp6_S_contig11.1222.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2373bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:548052..550424- (Ectocarpus species6 EcLAC_371)
ATGTCTTCGACCACCTTCGAGGAACGTAAGAGTGTCGCTCTGGCGGCCTG CTTCAACGACAAGCGTTGCCATCGGCGCCTGATCGGCCATCGAGCTCGCA CCTTTGATTTTCAGGTAAAATTCAAATTTCCTCAACACGGACGGTACATG ATGTAGACTGCACGCACATGCAACGGACGCTTAGGTATTCGACTAAACCG GCAGAGCTGCCTTGCCGCGGCTTGCAATACCTAGCGACGACGTCTTTTTG ACTGTTTTTGCCGTTCAGAGTTCATCCAAGATCGAACCGATGGCTGTACA CAGTGGAATTAAAAAAATTTGCAGTTGCGCCGCACGGATAAACCACGCTC GTTGTTGTTGGTGCAAGCAGTACGTAGCACAGAGCATGCAGCGACAGACC ACATGTACACGACCAATGCCTCCAATATACCACAGTGTAGTACTTCGTGT CATTTGTATTATGGACTGCATGCGCGGGTCGCCCCGGTGGTCTCGTGGGT AACCTCGCAAACATATTATTCTTGTAGCAGTTTGTGGGTTTGAATCTCTC TCGTGAACATACACATGCTTCAAGTAAGAGGGAAGAGACTGTTGAACCCT TCTCGCGTGCAACTCGACGGCAAGTACCGCAGGGGGAAGGTGGGATAACA TCAAAAGAACGAAAGAATACGAAACCCCCCGCGATATATACCTTCCTCCT CTGTGACCCCAGCTGATGTGTGAAGAAGTATGAAACATGTCTAGCACTGC GAGCTGAGCACCTCCATTCTGAAGCCCGCCACCCCTAATTTCGCATGCGG GGCGGAGAACCCATACTCCGCAAGGAAGGCGCTCGTGTTAAGGAAGAAAT GGTGTATCTTGGCATCATCGAGCACACGTGTAGTCTTCCAAAGCTATATC GCTGAAAGGGCCGAGGCCGACACGCGATGGAGCCGTTTACAGTCAGTCTT CATTCGCACAAGGACGTGGCCACACTCTGGCTCACAAGCAGGTTATTGGA TGCAACTTGACCGTCATGCCACCACCTGCACAGCTGGCCGTGAAGTGCGG CGTCAATCTGATCGGTGCGCATCCACCGTGTGCCGTCCCGGTTTTCGTAG GGATGTGAGGCTTTTTGGTCGAAGGCACCACGGCCAGCCCTAAATCGATT ACATCTCCTCCGCCACCCCATGTCTCACCCCAACCCCAATGCAGTTCCAC CCAACAGAAGACGCCGCTATATCGGCGAGCGAGGACGGGACGGCCCGCGT GTGGGACCTCAGCAGTGGAAGGTGCGCCAAGTCCCTTGAGGGGCACAACA AAAAACACGAGGTGTTGCGGGCGTGCTGGGCCCCGCCGGGGGCGGCCAAC GACTCGGTCTCCGTTGCTACCGGCTCGGCCGACGGCATCGTCCGCCTATG GGGCATACGGCATGGTGACGGCAGGGACGAAACGAGCGGGGTAGACCGAT ACCAATCCCTCAAGGTCGTGGGGCAGTTGCGGCATCGCAACGAGGCGAAA GGGCTCGACGGCCAGGTCTACTCTTGCCACTTCATTCCCGATCCCAGCGG CGGCGCGCCGCCATCATCGGCAGCGGCGATGTGTCTGCTCACGGCCAGCG ACAGCAGCGTTCACCTGTGGGACGTGGAGACGCGGAAGCGGGTATCGTCC CGAGCCCTGTCGAAAGTCGGGGCACATTCCATCGGCGGGGAGCGGAACCC GGACGACCTCGCGTTCGTGTTCGACGCCAAGCCTCGCCCAGGGTCGGGGA GCTCCGTTCTCGCCGTCGCCCTCAGCGACGGCACGGTGAGGGTCGGGGAT GTCCTCCAACAGGGCGAAAAGACCGCGGTGCTGCGAGGAGTCACCGACAC CCATCTCACGAGTTTGGCGTGGTCGGACGATGGGACGGTCTTGGCTTCGT GCGGGGGAAACGGGACGATTACGGTGTGGGACACGAGAACCTGGACGGCA AGGTCGGTCTTGTGGGGCCACTCGAGGCCGGTGTACGGGGCGGCCTTCTA CCCCTGTGCTGGCAACGGCGGGGGGGGAGCAGCGGCGGCGGCGGCAACAA CATCGGGACAAGATTGCCCGCCGCAGCTCTTGCTGTCGTGGTCTAGCGAC GAGACCGTGTGCGCTTGGGACACAGGCAGAGCCACCGGTGACGCGACAGC CCCGCTCGCAACCCTTTCAGTCGAGGAAGGGTTTCCCGTTTACAGTTGCT CGGTCTCGGCGGATGGCCGGAGGTTTGCCTTGGCGGGAGGAGGCGGAGAT GAGAAGAGCGCCGGCTTCCTCGGCGTTCCCATCAAGCTCGTGGATCTGAG CGACGAAGCGAGAGCGAAAGATGGGAAGGAAAGTTTTGCCGACAATGGGA GCAATGAACCAGCACAGGGATGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:548052..550424-

>mRNA_Ecto-sp6_S_contig11.1222.1 ID=mRNA_Ecto-sp6_S_contig11.1222.1|Name=mRNA_Ecto-sp6_S_contig11.1222.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1293bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:548052..550424- (Ectocarpus species6 EcLAC_371)
ATGTCTTCGACCACCTTCGAGGAACGTAAGAGTGTCGCTCTGGCGGCCTG
CTTCAACGACAAGCGTTGCCATCGGCGCCTGATCGGCCATCGAGCTCGCA
CCTTTGATTTTCAGTTCCACCCAACAGAAGACGCCGCTATATCGGCGAGC
GAGGACGGGACGGCCCGCGTGTGGGACCTCAGCAGTGGAAGGTGCGCCAA
GTCCCTTGAGGGGCACAACAAAAAACACGAGGTGTTGCGGGCGTGCTGGG
CCCCGCCGGGGGCGGCCAACGACTCGGTCTCCGTTGCTACCGGCTCGGCC
GACGGCATCGTCCGCCTATGGGGCATACGGCATGGTGACGGCAGGGACGA
AACGAGCGGGGTAGACCGATACCAATCCCTCAAGGTCGTGGGGCAGTTGC
GGCATCGCAACGAGGCGAAAGGGCTCGACGGCCAGGTCTACTCTTGCCAC
TTCATTCCCGATCCCAGCGGCGGCGCGCCGCCATCATCGGCAGCGGCGAT
GTGTCTGCTCACGGCCAGCGACAGCAGCGTTCACCTGTGGGACGTGGAGA
CGCGGAAGCGGGTATCGTCCCGAGCCCTGTCGAAAGTCGGGGCACATTCC
ATCGGCGGGGAGCGGAACCCGGACGACCTCGCGTTCGTGTTCGACGCCAA
GCCTCGCCCAGGGTCGGGGAGCTCCGTTCTCGCCGTCGCCCTCAGCGACG
GCACGGTGAGGGTCGGGGATGTCCTCCAACAGGGCGAAAAGACCGCGGTG
CTGCGAGGAGTCACCGACACCCATCTCACGAGTTTGGCGTGGTCGGACGA
TGGGACGGTCTTGGCTTCGTGCGGGGGAAACGGGACGATTACGGTGTGGG
ACACGAGAACCTGGACGGCAAGGTCGGTCTTGTGGGGCCACTCGAGGCCG
GTGTACGGGGCGGCCTTCTACCCCTGTGCTGGCAACGGCGGGGGGGGAGC
AGCGGCGGCGGCGGCAACAACATCGGGACAAGATTGCCCGCCGCAGCTCT
TGCTGTCGTGGTCTAGCGACGAGACCGTGTGCGCTTGGGACACAGGCAGA
GCCACCGGTGACGCGACAGCCCCGCTCGCAACCCTTTCAGTCGAGGAAGG
GTTTCCCGTTTACAGTTGCTCGGTCTCGGCGGATGGCCGGAGGTTTGCCT
TGGCGGGAGGAGGCGGAGATGAGAAGAGCGCCGGCTTCCTCGGCGTTCCC
ATCAAGCTCGTGGATCTGAGCGACGAAGCGAGAGCGAAAGATGGGAAGGA
AAGTTTTGCCGACAATGGGAGCAATGAACCAGCACAGGGATGA
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