mRNA_Ecto-sp6_S_contig11.1222.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI) HSP 1 Score: 835 bits (2157), Expect = 2.130e-305 Identity = 426/432 (98.61%), Postives = 427/432 (98.84%), Query Frame = 1
Query: 1 MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYPCAGNGXXXXXXXXXXXX--GQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG 1290
MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSG+CAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDE SGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEK AVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFY CAGNGXXXXXXXXXXXX GQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG
Sbjct: 1 MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDEKSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYSCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDEARAKDGKESFADNGSNEPAQG 432
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A835YNR1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR1_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.940e-61 Identity = 168/495 (33.94%), Postives = 212/495 (42.83%), Query Frame = 1
Query: 40 LAACFNDKRCHRRLIGHRARTFDFQFHPT-EDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGI--------RHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMC--------------------------LLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGE-RNPDDLAFVFDAKPRPGSGSS-----VLAVALSDGTVRVGDVLQQGEKTAV----------------LRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG---------------------------HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDAT----APLATLSVEE-------------------GFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPI 1203
LA + D+ ++L+GH+ R FDFQFHPT A S SEDGT RVWD+ G S +G K EVLR CWAPPG + +A+GSADG+VRLW + R GRD +S +L+ V L + A G DGQVY+ FI GG+ L+ A+D +V LWDV T A S H+ GG RNPD+ FVFDAK GSG S LA ALSDGTVRV + + + + HLT++AW+ DG+ LA+CG + VWD RTWT R+ L HSRPVYG F A PQLLLSWSSD T+ AWD G A D APL S +P+ C+++ D +AGG + A GVP+
Sbjct: 24 LATRWRDQSRRKQLLGHKGRVFDFQFHPTVHSRAASCSEDGTVRVWDVQRGVSIASAKG--SKDEVLRICWAPPGTPG--IDLASGSADGLVRLWAMSAATSTATRGAPGRDGSSAA----ALRCVKTLDVKAAAGG-DGQVYALQFIGADGGGSSSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLMVAADDAVSLWDVGTGVVTRRWAFSSSAQHAHGGAARNPDNQVFVFDAKVCCGSGGSGGGDGTLAAALSDGTVRVQPLDSELPASTLHPCGSGSNSGXXXXXXXXXXXXAHLTAVAWAPDGSALAACGXXXGVEVWDARTWTRRAALQAQALAVSVRERLRCAANTQYGDHLPAAAHSRPVYGVMFCASA--------------------PQLLLSWSSDGTLKAWDWGAAANDMNGGDFAPLQQRSTAAQLVDVMRITCQHREVLSSGDYPILHCALARDASSVVVAGGDSGARGAAMTGVPV 489
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S2S0D4_9STRA (Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0D4_9STRA) HSP 1 Score: 204 bits (519), Expect = 8.440e-58 Identity = 146/415 (35.18%), Postives = 205/415 (49.40%), Query Frame = 1
Query: 73 RRLIGHRARTFDFQFHPTEDAAIS-ASEDGTARVWDLSSG--RCAKSLEGHNKKHEVLRACWAPPG-----------AANDSVS---VATGSADGIVRLWGIR-HGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVE-TRKRVSSRALSKVGAHSI------GGERNPDDLAFVFDAKPRP-GSGSSVLAVALSDGTVRV----GDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEG--FPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
R L+GH++R FD F P + ++ ASED TARVW + C +L GH+ EVLR WAPP A DS + + TG ADG VR+W + G +E + +D G D QVYSC F +GG P ++ A+ S V+LWD++ T + R +++ S+ GGERN +VFD + G+ +++A ALSDG+ R+ G + Q L H+TS++W+ DG LA G+G+I +WDTRTW +R VL G H RPV+GA F+P + P L+SWSSD ++ AW+T + D APL+ S EG +P+ SC S+ G +AGG G S FLG P+ L DL
Sbjct: 36 RALLGHKSRCFDCHFQPGSRSLVATASEDCTARVWQAGASGYSCLATLRGHSS--EVLRVSWAPPSLSAGLSMAAGSAGTDSEAAHVLCTGGADGAVRVWKVAVDGTAHEEVALLDH-----------------GEDNQVYSCLFTDSIAGGGAP------VVIAAAGSKVNLWDLDATSAPATGRLIAEWEYASLPSGQVYGGERNAAQENYVFDLQISSLGASHTLIAAALSDGSTRITGGHGGAVHQN--VVALTTSDMVHVTSVSWAADGLSLACSRGDGSIVIWDTRTWRSRGVLQGGHQRPVFGAKFHPAS--------------------PHFLVSWSSDGSMGAWNTSVSAEDMDAPLSMFSTREGADYPILSCDFSSAGDALLIAGGSGSGNS--FLGTPVWLHDL 401
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S2CQ19_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQ19_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.550e-38 Identity = 104/285 (36.49%), Postives = 141/285 (49.47%), Query Frame = 1
Query: 415 AKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVE----TRKRVSSRALSKVGAHSI--GGERNPDDLAFVFDAK---PRPGSGSSVLAVALSDGTVRVGDVLQQG----EKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEE---GFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
A G D QVYSC FIP+ S L+TA++S+V WD+ + + S+ + +G + G +RNP++ FVFD + P G + + A ALSDGT RV L G A L L+++ WS DG LA+ G+G++ VWD+RTW R+VL G HSRP YG+ F+P P LLLSWSSD T+ WD+ R + +P+ C+ S DGR +AGG G S FLGVP+ LVDL
Sbjct: 8 AHGKDAQVYSCGFIPETS-----------FLITAAESTVRCWDLRVGSSSEEPTSAWSYDSIGRTTPYGGAQRNPNNENFVFDIRVSPPATGGVNRLFAAALSDGTARVSAGLHAGGVSPTSVADLSLNDGVMLSAIEWSPDGRSLAASRGDGSLLVWDSRTWKCRAVLAGAHSRPCYGSVFHPH--------------------DPALLLSWSSDGTIALWDSLRTERPEPIHYGLTPHQADSPSYPILRCAWSPDGRSLVVAGGDGSG-SMSFLGVPVWLVDL 260
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA) HSP 1 Score: 134 bits (337), Expect = 6.910e-32 Identity = 126/418 (30.14%), Postives = 177/418 (42.34%), Query Frame = 1
Query: 52 FNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPP---GAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVL----AVALSDGTVRVGDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWG-HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLS--------DEARAKDGKESF 1257
+N R GH R FD + ++ASEDGTA+VW L+ GR + K EVLR WAPP AA S+ +A ADG LW D + + K + +L H + QVY C + + A LLTA+ ++V WDV K + + + D A+VFD +P P L A A+SDGT RV DV + VLR D+ +T++ W GT +ASC G+G VWD RTW L G H+ P YGAA + L WS ++ + D AT ATAP+ T + P++ C+ S+ + GG G + A + + + DLS ++A K +ESF
Sbjct: 7 YNINAKQREFAGHTGRVFDVDLGQ-DGLCVTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASL-LAVAGADGFCNLWR------------GDDWSAPKSLQRLDHGGD------QVYGCAW-------SACGDAYGAWLLTAAGAAVRTWDVNAGKSIKQWSYQEPRG----------DQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDVRLDYD-ARVLRAPGDSKVTAVGWLG-GTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAA---------------KTDGFVASWAAEGLAFWSCEDALRKAD---ATKKATAPI-TDAAGNAVPLFQCAFSSS--NIVVCGGAGGKGDA--IVPSVFVYDLSKKRSRGDEEDASEKRPRESF 362
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S1ZZE4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZE4_TRICV) HSP 1 Score: 103 bits (258), Expect = 7.480e-21 Identity = 127/429 (29.60%), Postives = 172/429 (40.09%), Query Frame = 1
Query: 127 EDAAI--SASEDGTARVW--DLSSGR--CAKSLEGHN-KKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDG-QVYSCHFIPDPSG-GAPPSSAAAM---CLLTASDSSVHLW-------------DVE-----------------------------------TRKRVSSRALSKVGAH----SIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLR-GVTDTHLTSLAWSDDGTVLASCGGNGTITVW-----DTRTWT---ARSVLWG---HSRPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAG 1185
+DA + SA DG +VW D ++G+ C +L+ H KK R P A R E G+D + E +G + QVY+ F+ D G G P + A M LLT+SD VHLW D E +KR SR GA + GG+RNPD+L FVFDA P +G +L ALSDGT+R+ V +G ++L+ H+TSLAW + GT LAS + +W D R W +VL G + RPV+GA + C G QD LLLSW D +C WD R+TG +PL+ L + FP+Y+ V R GG D+ + G
Sbjct: 16 DDAPLLASAGADGVVKVWRHDEAAGKWICVSTLDHHKMKKRTAARRSGGEPDAPM------------------------RSEDDGMDDEGN----------EEGEGTEPPQVYALAFVEDWCGPGNPHQAGAGMGEDLLLTSSDDYVHLWRPTMGGGGENVLRDAEGGGAKMRLDRRMALRFGHMHEANWGVSAQVDGASWPKKRSRSRDDDSSGAQQQPRAFGGDRNPDNLVFVFDASFCPSNG--LLGAALSDGTLRL--VNGRGVCVSLLQLPGCRAHITSLAWDETGTRLASTIATSHVILWTVDGGDGRGWPRSGCAAVLEGGHDYGRPVFGAKY--CGG-------------PNQD----LLLSWGVDGKMCVWDA-RSTGQIRSPLSILVSDGSFPLYAVDVR---ERHETTPGGVDDDAQG 383
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S1DA97_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA97_CYCTE) HSP 1 Score: 102 bits (253), Expect = 1.140e-20 Identity = 92/309 (29.77%), Postives = 132/309 (42.72%), Query Frame = 1
Query: 505 LLTASDSSVHLWDVETRKRVSSRALSKV-----------------------------------------GAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAV----LRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWD----------TRTWTARSVL-WGHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVE-EGFPVYSCSVSADGR-----------RFALAGGGGDEKSAGFLGVPIKLVDLS 1221
L+T+SD +HLW+++ S L++V G GGERNPD+L FVFDA P SG +L ALSDG+VR L G V L G +H+TS +W GT LASC G + +W+ + T +VL GH RP++GA + C G +LL+SW D +C WD+ R+ G+ APL TL + + +P+Y+ + G R A+ GG + GFLG+P+ L D++
Sbjct: 14 LMTSSDDFLHLWEIDEPSTEESWELTEVMSIRFTPMETFGYGVTVCRITGKGLDIPGGWSSSRASPGGDGGVGYGGERNPDNLVFVFDASYCPSSG--LLGAALSDGSVR----LMNGRGVCVSILTLPGC-QSHMTSFSWDSSGTRLASCVATGHLILWEIDLAGYSYRGSVTPACMAVLEGGHQVGRPLFGAQY--CGGK-----------------EEELLVSWGIDGRLCLWDS-RSQGNIGAPLNTLVAKNDDYPIYAIDMFHGGXXXXXXXXXEVSRMAVGGG----REGGFLGIPLYLYDIT 291
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S1VKZ2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKZ2_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.320e-20 Identity = 112/452 (24.78%), Postives = 174/452 (38.50%), Query Frame = 1
Query: 145 ASEDGTARVWDLSSGRCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPD----PSGGAPPSSAAAMCLLTASDSSVHLWDVETRKR----------VSSRALSKVGA-------------------------------------------------HSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLW----------GHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVS-------------------ADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
+ E+ RV SS ++ L+ K+H+ L A G A+ V V + S+D G + + + SL++ + + ++ Q+Y FI D GG S LLT+S+ VHLW++E + + +L VG GGERNP+++ FVFD P +G + VALSDG++R+ + L G +HLTSLAW G LASC G + +WD TA S W GH+ RP+YGA + G G L+LSW +D +C WD + G+ AP++ L + +P ++ V+ +DG +++ G G + GFLG+P + D+
Sbjct: 104 SKENEVLRVAWASSAWASRDLKRGPKQHQHLIAS----GGADGVVKVWSLSSDAA--------GSAKWKCVATLDHSSLELRPKPATNDGSEPDPPQIYGLQFIDDWKGVGGGGCNDDSHTNSFLLTSSEDFVHLWEIENVQNGKVFFIEVLSIRFTSLYDVGYGVSLFPVTSNGIDITSNKENMDAAAAPQTIDLSNPVDPATVLNPEQEQNQPFGGERNPENIIFVFDVSYCPANG--ITGVALSDGSLRLVNGRGVAVAALTLPGC-QSHLTSLAWDSTGNRLASCVATGHVILWDLHLGTADSHEWRPSCRAVLEGGHTLGRPLYGAKY---CGEG------------------NLILSWGADGKICLWDA-HSLGNIQAPISVLLSKPDYPFFAVDVATKTTSNVGKSADAKNSNEKSDGDGYSVMVGAGGGREGGFLGLPTYIYDV 518
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S4AKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKL3_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.610e-20 Identity = 99/333 (29.73%), Postives = 142/333 (42.64%), Query Frame = 1
Query: 271 DSVSVATGSADGIVRLWGIRHGDGRDETSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIP--DPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLR-GVTDTHLTSLAWSDDGTVLASCGGNGTITVWD------------TRTWTARSVLWGHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDL 1218
D S S+D + LW I E +D Q L + GQ H + K +V S +F P D S G S L D+ SS A K G+ + GGERNP + FVFDA PGSG +L VALSDG++R+ V +G +V++ + +HLTS W G LA+C G G + W T GH RP++G+ F C G LL+SW D +C W + +A+G+ P+A L + +P+++ +S R + GG GF+GVP+ +
Sbjct: 388 DQNSFLMTSSDEFIHLWEI-------ERHPLD--QQLSLDGQKIHLLQEKIKLKEVLSLYFGPLDDHSYGVTACSITGEGL-----------DLPAPPTKSSEA--KDGSVAFGGERNPSNTIFVFDAAYSPGSG--LLGVALSDGSLRL--VNGRGYCISVIQLPGSKSHLTSFCWDATGNRLATCVGTGHLITWSLDPESHDKGNYHTAATCTAIFEGGHQSGRPLFGSRF--CGGE-----------------DENLLISWGIDGKLCLWHS-KASGNIYDPVAILKDDGSYPIFAVEISRSERNLVVGGG----SEGGFIGVPLHFYSI 670
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Match: A0A7S4VLI3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLI3_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.970e-18 Identity = 97/360 (26.94%), Postives = 151/360 (41.94%), Query Frame = 1
Query: 295 SADGIVRLWGI----RHGDGRDE-TSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWD--VETRKRVSSRALSKVGAHSIG--------GERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKTAVLR-GVTDTHLTSLAWSDDGTVLASCGGNGTITVW-----DTRTWTARSVL----WGHS--RPVYGAAFYPCAGNGXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSC-------------SVSADGRRF-----ALAGGGGDEKSAGFLGVPIKLVDLSDEARAK 1239
S+D + LW + + GD ++E + + +L +V +L KG G V+ VHL D V+ ++ S H IG G+RNPD+L +VFDA S + +L VALSDGT+R+ V +G ++L+ +HLTS AW G LASC G + +W D + W S L GH RP++GA + C +L++SW D +C WD+ + G +P+A L +P+++ +V A+ + A+AGG + GFLG+P+ L D+ RA+
Sbjct: 40 SSDDFIHLWELLPCQKQGDNKEEGKTATTKEVNLSIVMKLHFTGLEKGYGG-VF-----------------------------VHLADSLVDRLRKTKSNEAEVCSNHMIGRGDNFVFGGDRNPDNLTYVFDASHC--SSNDLLGVALSDGTLRL--VNGRGVCVSILQLPGCSSHLTSFAWDKSGMRLASCVATGHLILWSIDLGDGKGWVMPSCLAVLEGGHQPGRPLFGAKY--CGSENE-----------------ELIMSWGVDGRLCLWDS-HSFGQIHSPMAILVDRSDYPIFAVDKLEIVRKSKANGNVGANENGYDISCIAVAGG----RDGGFLGIPVYLYDVKRHKRAQ 341 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1222.1 >prot_Ecto-sp6_S_contig11.1222.1 ID=prot_Ecto-sp6_S_contig11.1222.1|Name=mRNA_Ecto-sp6_S_contig11.1222.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=431bp MSSTTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASback to top mRNA from alignment at Ecto-sp6_S_contig11:548052..550424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1222.1 ID=mRNA_Ecto-sp6_S_contig11.1222.1|Name=mRNA_Ecto-sp6_S_contig11.1222.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2373bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:548052..550424- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:548052..550424- >mRNA_Ecto-sp6_S_contig11.1222.1 ID=mRNA_Ecto-sp6_S_contig11.1222.1|Name=mRNA_Ecto-sp6_S_contig11.1222.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1293bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:548052..550424- (Ectocarpus species6 EcLAC_371)back to top |