mRNA_Ecto-sp6_S_contig11.1179.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 706 bits (1822), Expect = 7.990e-256 Identity = 363/382 (95.03%), Postives = 371/382 (97.12%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFANR 1146
IRWVNLWPSQSFSEGVASRVLSNEPE TAGEDGDS+EDGDATQRGISWT ISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAK+RARNEVPRALRGDVSTSEFPTALLGT PQQ+NLDDGWSA RQ SGTIQSPQLMEHQAVSSWDSTGGGDSTNEQ+RGRTNTRAG+ IGQVS+CRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMV RT RVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQ DEDARRNADWFRIGFEPLFADFTQAGSWFI+YTLIEWAVLACIAVLVDN+AVQCG FCAIHSMTFILLVACKPFANR
Sbjct: 6 IRWVNLWPSQSFSEGVASRVLSNEPESTAGEDGDSEEDGDATQRGISWTVISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALLGTRPQQKNLDDGWSAGRQTSGTIQSPQLMEHQAVSSWDSTGGGDSTNEQKRGRTNTRAGSSIGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFANR 387
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 552 bits (1423), Expect = 4.820e-180 Identity = 293/389 (75.32%), Postives = 322/389 (82.78%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQ--------RVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
+RWVNLWPSQSFSEGVAS VL NEPEPT+GED DS+EDGD+TQRGISWT ISDVGSFLFMGNLALFAGF + IFS+HIL+ASA+EAYWLAK+RARNE+PRAL GD+STS TA WS R IQSPQLMEHQA+ SWDSTG DSTN Q+ RTNTRAG+ IGQVSECRELSQSAWLHYPHLELVFL FAFEGAVTSQVSALR+TSSSTVFYAAVATL + +A ++ RVRVRSDALIVFTSN++DEGSTG S++YSK + GL+KDSSLFAWADKG W TVQ ADEDARR+ADWFRIGFEPL+ADFTQAGSWF +YTLIEWA LACIAVLVDNSAVQCG FCA+HSMTFILLV CKPFAN
Sbjct: 138 LRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTA--------------WSGTR----AIQSPQLMEHQALPSWDSTGRNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFAN 508
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 474 bits (1221), Expect = 6.100e-160 Identity = 253/381 (66.40%), Postives = 301/381 (79.00%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
+RWVNLWPS+SFSEG+ASR++S+EP D SDED D T IS T S+VGS LFMGNLALF+G L+ IF+ H+LVAS +EAYW+AK+RAR + R+LR +S SE P AL GTW QQ +DDG SA Q+SG +QSPQ ME QAVS +D GG ++E++ G NTR G IGQVS+CRELSQS WLHYPHLEL+FL FAFEGAVTSQ++ALR+ +SST+ YAAVATLV YP+LMV MVART RV V+ DALIVF S+E++E G S S+T++GL+ D SLF+WADKGQWETVQ A++ ARR ADWFRIGFEPLFADFTQAGSWFIIYTLIE AVLA IAVLVDNSA+Q FCA+HS+TF+LLV KPFAN
Sbjct: 182 LRWVNLWPSESFSEGIASRIISDEP------DQPSDED-DTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYD--GGDSKSDEEEGGPRNTRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFAN 553
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: A0A6H5KBY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY1_9PHAE) HSP 1 Score: 386 bits (991), Expect = 1.830e-122 Identity = 245/506 (48.42%), Postives = 285/506 (56.32%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGD-----ATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAK-----------------------------------------------------------------------------------ERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLV--------FYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIE-----------------------------WAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
+RWVNLWPS+SFSEGVASR+ +EP+ G+D T+RGIS + D+GS LFMGNLALFAG L+ IFSLHILVAS IEA+WLAK +RA E RAL + E TA+L T QQ +LD G SA RQ++ T++S L + S G +NE++ GRTN R +G+V ECRELSQS WLHYPHLEL+FL FAFEGAVTSQVSALR+TSSS ++YAA+ TLV YPVLM AMVART RVRVRSDALIVF SNE+ G +SK +AG RKD S FAWADKGQWETVQ +D +ARR+ADWFRIGFEPLFADFTQAGSWFI+YTL+E WA A + VLVDNSAVQ G FCA+HS TFILLVA KPFAN
Sbjct: 97 LRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASGIEAHWLAKVRNDPTLSCRLVSRAVPQGKTSIRSTISMAGVFGVQIVTIAKPNDGGMGNERRATQSCNGQRMLLTHPPTNKLPSCLCFVLYKQRASREASRALGHGLFLGELSTAILDTRFQQPSLDRGSSAGRQSADTVRSHSLRGPSTLFRGSSDSGDLESNEEEGGRTNARQRKSMGRVLECRELSQSPWLHYPHLELIFLFFAFEGAVTSQVSALRSTSSSKLYYAALVTLVRACEAGAVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWMGRKEFFSKLLAGSRKDFSFFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMENADANSISTITFAGALTCRRGNFEVSLMKWAFFAIVGVLVDNSAVQLGLFCAMHSSTFILLVAFKPFAN 602
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 1.680e-119 Identity = 251/525 (47.81%), Postives = 286/525 (54.48%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGED-GDSDEDGDATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKER-----ARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIE-----------------------------------------------------------------------------------------------------------------------------------------WAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFANR 1146
+RWVNLWPS+SFSEGVASR+ +EP+ GED G T+RGIS + D+GS LFMGNLALFAG L+ IFSLHILVASAIEA+WLAK R + E RAL +S E TALL T QQ +LD G SA RQ+S T+QS L S G +NE + GRTN R +G+V ECR+LSQS WLHYPHLEL+FL FAFEGAVTSQVSALR+TSSS ++YAA+ TLV YPVLM AMVART RVRVRSDALIVF SNE+ G +SK +AG RKD SLFAWADKGQWETVQ +D +ARR+ADWFRIGFEPLFADFTQAGSWFI+YTL+E WA A + VLVDNSAVQ G FCA+HS TFILLV KPFANR
Sbjct: 57 LRWVNLWPSESFSEGVASRIFPSEPDKIYGEDDGXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASAIEAHWLAKVRNGPTLSCREASRALGHGLSLGELSTALLDTRSQQPSLDRGSSAGRQSSDTVQSHSLRGPSTPFRGSSDSGDLESNEGEGGRTNARQRKSMGRVLECRQLSQSPWLHYPHLELIFLFFAFEGAVTSQVSALRSTSSSKLYYAALVTLVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWMGKKEFFSKLLAGSRKDFSLFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEFFSKLLAGSRKDFSLFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEASLTPNVAGTGSTSTVDEIQPVMTLTMSSVSPGWQVTKLRKDSLARSTKYTITFTGALTCRWGNFEVSLMKWAFFAIVGVLVDNSAVQLGLFCAMHSSTFILLVVFKPFANR 581
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: A0A6H5KD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE) HSP 1 Score: 386 bits (991), Expect = 2.730e-119 Identity = 247/502 (49.20%), Postives = 282/502 (56.18%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGD-----ATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAK-----------------------------------------------ERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLV--------FYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIE------------------------------------------------------------WAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFANR 1146
+RWVNLWPS+SFSEGVASR+ +EP+ G+D T+RGIS + D+GS LFMGNLALFA L IFSLHILVASAIEA WLAK +RA E RAL + + E TA+L T QQ +LD G SA Q+ T++S L S G +NE++ GRTN R +GQV ECRELSQS WLHYPHLELVFL FAFEGAVTSQVSALR+TSSS ++YAA+ TLV YPVLM AMVART RVRVRSDALIVF SNE+ G +SK +AG RKD SLFAWADKGQWETVQ +D +ARR+ADWFRIGFEPLFADFTQAGSWFI+YTL+E WA A + VLVDNSAVQ G FCA+HS TFILLV KPFANR
Sbjct: 239 LRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAALLAIIFSLHILVASAIEARWLAKIVTIAKPNDGGMGNERRATQSCNGQRMLLTHPPTNKLPSCLCFVLYKQRASREASRALGHGLFSGELSTAILDTRFQQPSLDGGSSAGSQSPDTVRSHSLRGPSTPFRGSSDSGDLESNEEEGGRTNARQRKSMGQVLECRELSQSPWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSKLYYAALVTLVRACEAGAVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWMGRKEFFSKLLAGSRKDFSLFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMENADANSIRIALLQVPNSTITFAGVLTCRRGNFEVSLMKVFSLTFYNAHQDAPPPCIVLRGWAFFAIVGVLVDNSAVQLGLFCAMHSSTFILLVVFKPFANR 740
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 266 bits (679), Expect = 6.630e-80 Identity = 167/388 (43.04%), Postives = 226/388 (58.25%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPT---ALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVF--TSNESDEGSTGT--SSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
+RWVNLWP S R S+ E +DG + GI T+ SD+G+ +F+GN+ LF LL I +HI++ SA+EAYWL+KERA E+ +A R + + + P E+ D +A+ G + EH A S D G D E+ +R L +++CR S S WL++PH+EL+FLLFAFEGA+ SQ++ +R VFY+A A+LV YPVLM+ + RT RVRV D LIVF E + G+ GT S SK GL++D S+FAWA+ G WETV+ DE+ R D FRIGFEPLF DFT+ SWF +Y L+E +AC AVLVD+S VQ FC +HS++F+LLV +PFAN
Sbjct: 86 LRWVNLWPPDSVG-----RTFSSGGERLFQQDG-------SRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSPDAESDPDELAASASNDGAMS----REHAAADSVDV--GVDF--EEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFAN 453
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 269 bits (687), Expect = 4.570e-77 Identity = 178/456 (39.04%), Postives = 235/456 (51.54%), Query Frame = 1
Query: 4 RWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQ----------RGISWT-AISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTI--------------QSPQLMEHQAVSS-----------------------W-------------DSTGGGDSTNEQQRGR----TNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVFTSNESDE--GSTG---------TSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
RW NLWP SF+E D+ ++G + G SW ++ +GS +F+GN L G L+ IF LH+ + S +EAYWLAK+RA+ E RA R VS E+ + + E AR + GT + P L+ A S W D+ G D ++ + G T TRA + + V+ECRE S+SAWLH+PH+ELVFL FA+EGAV SQVSALR V AA LVFYP+LM V RT VRVR + LIVFT E+D+ G G ++S SK AG +D SLFAWA+KG WET + +E RR WFRIGFEPLF DFT++G+WF+ +TL+EWA L CI L+D S +Q FCA+H+++F+LLV +PFAN
Sbjct: 795 RWANLWPPASFAEEFI----------------DTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFAN 1234
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 256 bits (654), Expect = 1.510e-72 Identity = 151/389 (38.82%), Postives = 209/389 (53.73%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQRGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPTALLG---TWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGSTGTS-----SIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
+RW+NLW + +AS + E S +G+ +F+GNLAL G LL IF +H+ S +EA WL K+RAR + A R E L G +L D ARQA +P + + D GG RG R+ + V+ CRE S SAWLH+PH+ELVFL FAFEGAV S SA+R + +FY A+A +V YP+LM V RT VRVR + L++F +++G+ G + + S+ + ++ SLF+WADKGQWETVQ D R DWFRIGFEP+F D+T+ G+WFI+ +L+EWA A + V+++NS VQ FC +HS+ F +L+ KPFAN
Sbjct: 1230 LRWINLWWPAEVGQNIASDECAFE------------------------AGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGG-------RGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIF-KTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFAN 1586
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 251 bits (641), Expect = 8.780e-71 Identity = 160/394 (40.61%), Postives = 212/394 (53.81%), Query Frame = 1
Query: 1 IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQ-------RGISWTAISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKERARNEVPRALRGDVSTSEFPTALLGTWPQQENLDDGWSAARQASGTIQSPQLMEHQAVSSWDSTGGGDSTNEQQRGRTNTRAGALIGQVSECRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVARTQRVRVRSDALIVFTSNESDEGS------TGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQMADEDARRNADWFRIGFEPLFADFTQAGSWFIIYTLIEWAVLACIAVLVDNSAVQCGSFCAIHSMTFILLVACKPFAN 1143
+RW+NLWP SF+ + E + GED G+ D+ S +F+GNL LF L IF +HI VAS IEAYWLAK A V RA R V E L W + + + R A +S D G D T+ ++ G T + + +++ECRE SQS WLH+PH+EL++LLFAFEGAV +QVSA+R ++ V AV L+F+PVLM V T ++RS IVF N D T S SK GL++ S+FAW++KG+WE+V DE+ +R DWFRIGFEPLF DFT AGSWF +Y LIE A + V+VDNS +Q F A ++++F+LLV KPFAN
Sbjct: 2222 LRWINLWPPASFARSFTPASMYGELD-QEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAK--------------TSGDDEGEADDTDAEE-GMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFAN 2599 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1179.1 >prot_Ecto-sp6_S_contig11.1179.1 ID=prot_Ecto-sp6_S_contig11.1179.1|Name=mRNA_Ecto-sp6_S_contig11.1179.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=383bp IRWVNLWPSQSFSEGVASRVLSNEPEPTAGEDGDSDEDGDATQRGISWTAback to top mRNA from alignment at Ecto-sp6_S_contig11:27417..30285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1179.1 ID=mRNA_Ecto-sp6_S_contig11.1179.1|Name=mRNA_Ecto-sp6_S_contig11.1179.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2869bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:27417..30285- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:27417..30285- >mRNA_Ecto-sp6_S_contig11.1179.1 ID=mRNA_Ecto-sp6_S_contig11.1179.1|Name=mRNA_Ecto-sp6_S_contig11.1179.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1149bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:27417..30285- (Ectocarpus species6 EcLAC_371)back to top |