mRNA_Ecto-sp6_S_contig108.1167.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: D7FYB4_ECTSI (Fe_hyd_SSU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYB4_ECTSI) HSP 1 Score: 714 bits (1842), Expect = 1.510e-245 Identity = 406/538 (75.46%), Postives = 417/538 (77.51%), Query Frame = 1
Query: 586 LLEAGEEFVQRWRSINSGRSGSEG--------VGLNRELR-----WVRGRQHGRRWQPGSRPRLQL----RFRQRGGSTSS--WERRKRTECSNSGKGKIP---------TAPVVLFREEGKRAREPRVIRWRWKRSARDGHEGRESFFGADVGLPRVGVLRGEDGA*GAPFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
LLEAGEEFVQRWRSINSGRSG EG VG R WV P + L RF G +++++ + SN G + A + EEG+ AR PR G P + PFMSTVKSPQQMMGVLAKRVFPRAWNHP PSVA AAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRH DLDGDAEVDLVLTTAEVLELIEESASAADATL STSPASP RDAASDYFRRH PPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNS GYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQV LRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW
Sbjct: 175 LLEAGEEFVQRWRSINSGRSGPEGGRAKLGAAVGEGAPARPPLAAWV-----------APPPTVALSSTRRFNVELGEEEDNRMQQQRQGQVSNCASGVVSGKRGREGEEAARNSMAVEEGECARRPR---------------GPGELLVLTSACPGWVCYAEKTAPEALPFMSTVKSPQQMMGVLAKRVFPRAWNHPHPSVAAAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHPDLDGDAEVDLVLTTAEVLELIEESASAADATLTSTSPASPGRDAASDYFRRHFPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSDGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVALRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 686
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A0P1AVH7_PLAHL (Nuclear architecture related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVH7_PLAHL) HSP 1 Score: 219 bits (557), Expect = 2.270e-58 Identity = 138/289 (47.75%), Postives = 170/289 (58.82%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEE-SASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
V+HV+I C+DKKLEASRKDF+ + D +VD VL T E++ LIE A LAS +P V + VS DG ++ G + SGG+LE++FR AA ELF VD+ G PL Y GRN DFRE SL V G+ VLRFA AYGFRNIQSI+ K RR KCPYHFVE+MACPSGC+NGGGQIKPK + ++ V++ +E RV R P NP VQ +Y + +GG P AR++LHT YH VPKLE SNP W
Sbjct: 267 VYHVAIMPCFDKKLEASRKDFQDPE-DATKDVDCVLATTEIIMLIESLQVDFASLELASLTPEE----------------------------VMLSGVSEDGSTVLG-----SSYNATSGGHLEHIFRFAAKELFNVDVIG-PLDYVAGRNPDFREVSLVVEGKDVLRFAVAYGFRNIQSIMTKIRRRKCPYHFVEIMACPSGCLNGGGQIKPKSTLKASEL---LDNVTKRFQELRV-RDPFANPAVQYLYEKYLGGSPFTETARKVLHTQYHAVPKLEQSNPLGIKW 516
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A5D6XLY1_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLY1_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.390e-57 Identity = 140/294 (47.62%), Postives = 170/294 (57.82%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEV---DLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
V+HV++ C+DKKLEASRKDF LD + +V D VL T E++ELI A+ S D A+ + P L + VS DG ++ G +SGG LE++FR+AA ELFGVD+ G PL Y GRN DFRE +L VNGQ VL+FA AYGFRNIQS++ K RR KCPYH+VE+MACPSGC+NGGGQIKP R T L E + +V E RV R P DNP + VY + GG P AR HT YH VPKLELSNP W
Sbjct: 288 VYHVAVMPCFDKKLEASRKDF----LDAETQVRDVDCVLATTEIVELI----------------AAQSIDFAALELAQLSPQEILL-----------SGVSEDGAAVLG-----SNVNASSGGQLEHIFRYAAKELFGVDVRG-PLEYVVGRNPDFREVTLVVNGQEVLKFAIAYGFRNIQSVMTKLRRNKCPYHYVELMACPSGCLNGGGQIKP------RSTLLASELLRDVTSRFEELRV-RAPTDNPGCRYVYDKFCGGQPFSEPARATFHTRYHAVPKLELSNPLGIKW 537
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: H3GG46_PHYRM (Fe_hyd_SSU domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG46_PHYRM) HSP 1 Score: 214 bits (546), Expect = 7.610e-57 Identity = 140/291 (48.11%), Postives = 173/291 (59.45%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
V+HV++ C+DKKLEASRKDF+ + D +VD VL T E++ELI+ S + ATL S +S E L G VS DGLS+ G + +SGG LE++FR AA ELF V++ G PL Y GRN DFRE SL V G+ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQIKPK T L E + V +E +V R P NP V+ VY + +GG P AR +LHT YH VPKLE SNP W
Sbjct: 269 VYHVAVMPCFDKKLEASRKDFQDPE-DATKDVDCVLATTEIIELID-SLNIDFATLELASLSS-------------------EEALLSG-------VSEDGLSVLG-----SSLSASSGGQLEHIFRFAAKELFNVEVNG-PLEYVAGRNPDFREVSLVVEGKEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIKPK------STLLASELLDNVTSRFQELQV-RDPVANPAVKYVYEKYLGGVPFSEAARRVLHTQYHAVPKLEQSNPLGIKW 518
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A662WUJ6_9STRA (Fe_hyd_SSU domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUJ6_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.030e-56 Identity = 139/294 (47.28%), Postives = 171/294 (58.16%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDF---RHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
V+HV++ C+DKKLEASRKDF HQ D VD VL T E+++LIE A + AS A D +S+ + +S DG S+ G + +SGG LE++FR AA ELF VD+ G PL Y GRN DFRE SL V GQ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQ+KPK T L E + +E RV R P DNP V+ VY + + G P AR++LHT YH VPKLELSNP W
Sbjct: 300 VYHVAVMPCFDKKLEASRKDFLDPEHQVKD----VDCVLATTEIIDLIE----ALEIDFASLELA----DLSSEELML-------------------SGISEDGSSVLG-----SSLNASSGGQLEHIFRFAAKELFNVDVDG-PLEYVAGRNPDFREVSLVVEGQEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQVKPK------STLLASELLDNATSHFQELRV-RAPTDNPAVKYVYEKHLAGVPFSEAARKVLHTRYHAVPKLELSNPLGIKW 549
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A3M6VN20_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN20_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.020e-56 Identity = 131/291 (45.02%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
V+HV++ C+DKKLEASRKDF+ + EVD VL T E++EL+E + + A PA + P ++ + VS DG S+ G + +SGG LE++FR AA +LF V+++G PL Y GRN DFRE SL V G+ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQI+PK T L E + V +E +V R P NP V+ +Y + +GG P ARE+LHT YH VPK+E SNP W
Sbjct: 249 VYHVAVMPCFDKKLEASRKDFQDPE-HATREVDCVLATTEIIELVE----SLNIDFAGVKPA-------------NLTPEEIM----------LSGVSEDGSSVLG-----SSLNASSGGQLEHIFRFAAKKLFNVEVSG-PLEYVAGRNPDFREVSLVVEGKEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIRPK------STLLATELLDNVTSRFQELQV-REPTANPAVKYLYEKYLGGTPFSETAREVLHTQYHAVPKMEQSNPLGIKW 498
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: M4BN82_HYAAE (Fe_hyd_SSU domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN82_HYAAE) HSP 1 Score: 212 bits (539), Expect = 1.300e-55 Identity = 151/368 (41.03%), Postives = 195/368 (52.99%), Query Frame = 1
Query: 1012 PFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
PF+ T KSPQQ+ G + KR S +GA P V+HV++ C+DKKLEASRKDF+ + + EVD VL T E++ELIE+ D D+ +LA+ L P + + VS DG S+ G + +SGG LE++FR A+ ELFGVD+ G PL Y GRN DFRE SL V G+ VL+FA +YGFRNIQSI+ K RR KCPYH+VE+MACPSGC+NGGGQIKPK + T L ++ V+ +E +V R P +P V+ VY +GG P ARE+LHT YH VPK+E SNP W
Sbjct: 268 PFIDTTKSPQQIAGSIIKRFV-----------------------------SGEHGAAP--------------------HEVYHVAVMPCFDKKLEASRKDFQDAE-NATKEVDCVLATTEIIELIEK------------------LDV--DFVAL-----ELAK-LTPE-EIMLSGVSDDGSSVLG-----SSLNASSGGQLEHIFRFASKELFGVDVNG-PLEYVAGRNPDFREVSLAVEGKEVLKFAISYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPKSTL--QATGL-LDNVTSRFQELQV-RQPNASPAVKHVYETYLGGMPFSEVAREVLHTQYHAVPKMEQSNPLGIKW 548
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A484EG90_BRELC (Fe_hyd_SSU domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG90_BRELC) HSP 1 Score: 209 bits (532), Expect = 7.450e-55 Identity = 131/296 (44.26%), Postives = 171/296 (57.77%), Query Frame = 1
Query: 1237 VRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEE-SASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLR--EGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
++ V+HV++ C+DKKLEASRKDF+ + D +VD VL T E++EL+E + A LA+ SP E L G +S DGLS+ G + +SGG LE++FR+AA +LF V++ G PL Y RN+DF+E L V G VL+FA AYGFRNIQSI+ K +R +CPYH+VE+MACPSGC+NGGGQI+PK T L E +S V + E R P NP V+ VY + + G P ARE+LHT YH VPKLE NP W
Sbjct: 273 IKPNDVYHVAVMPCFDKKLEASRKDFQDPE-DATKDVDCVLATTEIIELLEAVNVDFASLELANLSP---------------------EEVLLSG-------ISEDGLSVLG-----SSLKASSGGQLEHIFRYAAKQLFNVEIKG-PLEYVTARNSDFQEVKLVVGGNEVLKFAIAYGFRNIQSIMTKIKRNRCPYHYVEIMACPSGCLNGGGQIRPK------STLLASELLSNVTKCFEQLHLRDPMANPAVKLVYDKYLDGMPFSKLAREVLHTRYHAVPKLEQLNPLGIKW 527
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: K3WYN8_GLOUD (Fe_hyd_SSU domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYN8_GLOUD) HSP 1 Score: 209 bits (531), Expect = 9.360e-55 Identity = 146/371 (39.35%), Postives = 190/371 (51.21%), Query Frame = 1
Query: 1012 PFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
PF+ T KSPQQ+ G L K + VSR ++ A N V+HV++ C+DKKLEASRKDF ++ + +VD VL T E++ELI ++ + S PA + P + + +S DG ++ G + +SGG LE++FR+AA ELF VD+ G PL Y GRN DFRE +L + GQ VL+FA AYGFRNIQSI+ K RR KCPYH+VE+MACPSGC+NGGGQIKPK T L E ++ V +E +V R P DNP + VY + G P AR+ HT YH VPKLE SNP W
Sbjct: 243 PFIDTTKSPQQIAGSLVKHM------------------------VSREQNIAPNE-------------------------VYHVAVMPCFDKKLEASRKDFLSEEFNV-KDVDCVLATTEIIELI----ASLNVDFMSLEPA-------------------VLSPQE----IMLSGISEDGSAVLG-----SSVNASSGGPLEHIFRYAAKELFNVDVNG-PLEYVVGRNPDFREVTLVIEGQEVLKFAIAYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPK------STLLASELLANVTSRFQELQV-RAPTDNPACKYVYEKYFAGQPFSDAARQAFHTRYHAVPKLEQSNPLGIKW 523
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A3R7KXU8_9STRA (Fe_hyd_SSU domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KXU8_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.160e-53 Identity = 150/372 (40.32%), Postives = 184/372 (49.46%), Query Frame = 1
Query: 1012 PFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEE-SASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
PF+ T KSPQQ+ G L KR S G TP +D V+HV++ C+DKKLEASRKDF+ + + +VD VL T E+++LIE A LA+ SP V + VS DG S+ G SGG LE++FR AA ELF V++ G PL Y GRN DFRE SL V G+ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQIKPK T L E + V +E V P N V+ VY + +GG P AR +LHT YH VPKLE SNP W
Sbjct: 244 PFIDTTKSPQQIAGSLIKRFV-----------------------------SGERGVTP---------ID-----------VYHVAVMPCFDKKLEASRKDFQDPEHET-KDVDCVLATTEIIDLIESLGIDFASLELANLSPEE----------------------------VMLSGVSEDGSSVLG-----SNLNATSGGQLEHIFRFAAKELFNVEVNG-PLEYMAGRNPDFREVSLVVEGKEVLKFAIAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIKPK------STLLASELLDNVTSRFQELHVCE-PVANLAVKYVYEKYLGGAPFSEAARSVLHTQYHAVPKLEQSNPLGIKW 524 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig108.1167.1 >prot_Ecto-sp6_S_contig108.1167.1 ID=prot_Ecto-sp6_S_contig108.1167.1|Name=mRNA_Ecto-sp6_S_contig108.1167.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=367bp MSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSAback to top mRNA from alignment at Ecto-sp6_S_contig108:541668..547567+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig108.1167.1 ID=mRNA_Ecto-sp6_S_contig108.1167.1|Name=mRNA_Ecto-sp6_S_contig108.1167.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5900bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:541668..547567+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig108:541668..547567+ >mRNA_Ecto-sp6_S_contig108.1167.1 ID=mRNA_Ecto-sp6_S_contig108.1167.1|Name=mRNA_Ecto-sp6_S_contig108.1167.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:541668..547567+ (Ectocarpus species6 EcLAC_371)back to top |