mRNA_Ecto-sp6_S_contig108.1167.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig108.1167.1
Unique NamemRNA_Ecto-sp6_S_contig108.1167.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: D7FYB4_ECTSI (Fe_hyd_SSU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYB4_ECTSI)

HSP 1 Score: 714 bits (1842), Expect = 1.510e-245
Identity = 406/538 (75.46%), Postives = 417/538 (77.51%), Query Frame = 1
Query:  586 LLEAGEEFVQRWRSINSGRSGSEG--------VGLNRELR-----WVRGRQHGRRWQPGSRPRLQL----RFRQRGGSTSS--WERRKRTECSNSGKGKIP---------TAPVVLFREEGKRAREPRVIRWRWKRSARDGHEGRESFFGADVGLPRVGVLRGEDGA*GAPFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            LLEAGEEFVQRWRSINSGRSG EG        VG     R     WV              P + L    RF    G       +++++ + SN   G +           A   +  EEG+ AR PR               G           P       +      PFMSTVKSPQQMMGVLAKRVFPRAWNHP PSVA AAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRH DLDGDAEVDLVLTTAEVLELIEESASAADATL STSPASP RDAASDYFRRH PPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNS GYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQV LRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW
Sbjct:  175 LLEAGEEFVQRWRSINSGRSGPEGGRAKLGAAVGEGAPARPPLAAWV-----------APPPTVALSSTRRFNVELGEEEDNRMQQQRQGQVSNCASGVVSGKRGREGEEAARNSMAVEEGECARRPR---------------GPGELLVLTSACPGWVCYAEKTAPEALPFMSTVKSPQQMMGVLAKRVFPRAWNHPHPSVAAAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHPDLDGDAEVDLVLTTAEVLELIEESASAADATLTSTSPASPGRDAASDYFRRHFPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSDGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVALRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 686          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A0P1AVH7_PLAHL (Nuclear architecture related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVH7_PLAHL)

HSP 1 Score: 219 bits (557), Expect = 2.270e-58
Identity = 138/289 (47.75%), Postives = 170/289 (58.82%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEE-SASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            V+HV+I  C+DKKLEASRKDF+  + D   +VD VL T E++ LIE      A   LAS +P                              V  + VS DG ++ G      +    SGG+LE++FR AA ELF VD+ G PL Y  GRN DFRE SL V G+ VLRFA AYGFRNIQSI+ K RR KCPYHFVE+MACPSGC+NGGGQIKPK      +    ++ V++  +E RV R P  NP VQ +Y + +GG P    AR++LHT YH VPKLE SNP    W
Sbjct:  267 VYHVAIMPCFDKKLEASRKDFQDPE-DATKDVDCVLATTEIIMLIESLQVDFASLELASLTPEE----------------------------VMLSGVSEDGSTVLG-----SSYNATSGGHLEHIFRFAAKELFNVDVIG-PLDYVAGRNPDFREVSLVVEGKDVLRFAVAYGFRNIQSIMTKIRRRKCPYHFVEIMACPSGCLNGGGQIKPKSTLKASEL---LDNVTKRFQELRV-RDPFANPAVQYLYEKYLGGSPFTETARKVLHTQYHAVPKLEQSNPLGIKW 516          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A5D6XLY1_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLY1_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.390e-57
Identity = 140/294 (47.62%), Postives = 170/294 (57.82%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEV---DLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            V+HV++  C+DKKLEASRKDF    LD + +V   D VL T E++ELI                A+ S D A+    +  P   L            + VS DG ++ G          +SGG LE++FR+AA ELFGVD+ G PL Y  GRN DFRE +L VNGQ VL+FA AYGFRNIQS++ K RR KCPYH+VE+MACPSGC+NGGGQIKP      R T L  E + +V     E RV R P DNP  + VY +  GG P    AR   HT YH VPKLELSNP    W
Sbjct:  288 VYHVAVMPCFDKKLEASRKDF----LDAETQVRDVDCVLATTEIVELI----------------AAQSIDFAALELAQLSPQEILL-----------SGVSEDGAAVLG-----SNVNASSGGQLEHIFRYAAKELFGVDVRG-PLEYVVGRNPDFREVTLVVNGQEVLKFAIAYGFRNIQSVMTKLRRNKCPYHYVELMACPSGCLNGGGQIKP------RSTLLASELLRDVTSRFEELRV-RAPTDNPGCRYVYDKFCGGQPFSEPARATFHTRYHAVPKLELSNPLGIKW 537          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: H3GG46_PHYRM (Fe_hyd_SSU domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG46_PHYRM)

HSP 1 Score: 214 bits (546), Expect = 7.610e-57
Identity = 140/291 (48.11%), Postives = 173/291 (59.45%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            V+HV++  C+DKKLEASRKDF+  + D   +VD VL T E++ELI+ S +   ATL   S +S                    E L  G       VS DGLS+ G      +   +SGG LE++FR AA ELF V++ G PL Y  GRN DFRE SL V G+ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQIKPK       T L  E +  V    +E +V R P  NP V+ VY + +GG P    AR +LHT YH VPKLE SNP    W
Sbjct:  269 VYHVAVMPCFDKKLEASRKDFQDPE-DATKDVDCVLATTEIIELID-SLNIDFATLELASLSS-------------------EEALLSG-------VSEDGLSVLG-----SSLSASSGGQLEHIFRFAAKELFNVEVNG-PLEYVAGRNPDFREVSLVVEGKEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIKPK------STLLASELLDNVTSRFQELQV-RDPVANPAVKYVYEKYLGGVPFSEAARRVLHTQYHAVPKLEQSNPLGIKW 518          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A662WUJ6_9STRA (Fe_hyd_SSU domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUJ6_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.030e-56
Identity = 139/294 (47.28%), Postives = 171/294 (58.16%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDF---RHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            V+HV++  C+DKKLEASRKDF    HQ  D    VD VL T E+++LIE    A +   AS   A    D +S+                       + +S DG S+ G      +   +SGG LE++FR AA ELF VD+ G PL Y  GRN DFRE SL V GQ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQ+KPK       T L  E +       +E RV R P DNP V+ VY + + G P    AR++LHT YH VPKLELSNP    W
Sbjct:  300 VYHVAVMPCFDKKLEASRKDFLDPEHQVKD----VDCVLATTEIIDLIE----ALEIDFASLELA----DLSSEELML-------------------SGISEDGSSVLG-----SSLNASSGGQLEHIFRFAAKELFNVDVDG-PLEYVAGRNPDFREVSLVVEGQEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQVKPK------STLLASELLDNATSHFQELRV-RAPTDNPAVKYVYEKHLAGVPFSEAARKVLHTRYHAVPKLELSNPLGIKW 549          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A3M6VN20_9STRA (Fe_hyd_SSU domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN20_9STRA)

HSP 1 Score: 211 bits (538), Expect = 6.020e-56
Identity = 131/291 (45.02%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 1252 VFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            V+HV++  C+DKKLEASRKDF+  +     EVD VL T E++EL+E    + +   A   PA             +  P ++            + VS DG S+ G      +   +SGG LE++FR AA +LF V+++G PL Y  GRN DFRE SL V G+ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQI+PK       T L  E +  V    +E +V R P  NP V+ +Y + +GG P    ARE+LHT YH VPK+E SNP    W
Sbjct:  249 VYHVAVMPCFDKKLEASRKDFQDPE-HATREVDCVLATTEIIELVE----SLNIDFAGVKPA-------------NLTPEEIM----------LSGVSEDGSSVLG-----SSLNASSGGQLEHIFRFAAKKLFNVEVSG-PLEYVAGRNPDFREVSLVVEGKEVLKFAVAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIRPK------STLLATELLDNVTSRFQELQV-REPTANPAVKYLYEKYLGGTPFSETAREVLHTQYHAVPKMEQSNPLGIKW 498          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: M4BN82_HYAAE (Fe_hyd_SSU domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN82_HYAAE)

HSP 1 Score: 212 bits (539), Expect = 1.300e-55
Identity = 151/368 (41.03%), Postives = 195/368 (52.99%), Query Frame = 1
Query: 1012 PFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            PF+ T KSPQQ+ G + KR                               S  +GA P                      V+HV++  C+DKKLEASRKDF+  + +   EVD VL T E++ELIE+                   D   D+        +LA+ L P   +  + VS DG S+ G      +   +SGG LE++FR A+ ELFGVD+ G PL Y  GRN DFRE SL V G+ VL+FA +YGFRNIQSI+ K RR KCPYH+VE+MACPSGC+NGGGQIKPK     + T L ++ V+   +E +V R P  +P V+ VY   +GG P    ARE+LHT YH VPK+E SNP    W
Sbjct:  268 PFIDTTKSPQQIAGSIIKRFV-----------------------------SGEHGAAP--------------------HEVYHVAVMPCFDKKLEASRKDFQDAE-NATKEVDCVLATTEIIELIEK------------------LDV--DFVAL-----ELAK-LTPE-EIMLSGVSDDGSSVLG-----SSLNASSGGQLEHIFRFASKELFGVDVNG-PLEYVAGRNPDFREVSLAVEGKEVLKFAISYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPKSTL--QATGL-LDNVTSRFQELQV-RQPNASPAVKHVYETYLGGMPFSEVAREVLHTQYHAVPKMEQSNPLGIKW 548          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A484EG90_BRELC (Fe_hyd_SSU domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG90_BRELC)

HSP 1 Score: 209 bits (532), Expect = 7.450e-55
Identity = 131/296 (44.26%), Postives = 171/296 (57.77%), Query Frame = 1
Query: 1237 VRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEE-SASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLR--EGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            ++   V+HV++  C+DKKLEASRKDF+  + D   +VD VL T E++EL+E  +   A   LA+ SP                      E L  G       +S DGLS+ G      +   +SGG LE++FR+AA +LF V++ G PL Y   RN+DF+E  L V G  VL+FA AYGFRNIQSI+ K +R +CPYH+VE+MACPSGC+NGGGQI+PK       T L  E +S V +  E    R P  NP V+ VY + + G P    ARE+LHT YH VPKLE  NP    W
Sbjct:  273 IKPNDVYHVAVMPCFDKKLEASRKDFQDPE-DATKDVDCVLATTEIIELLEAVNVDFASLELANLSP---------------------EEVLLSG-------ISEDGLSVLG-----SSLKASSGGQLEHIFRYAAKQLFNVEIKG-PLEYVTARNSDFQEVKLVVGGNEVLKFAIAYGFRNIQSIMTKIKRNRCPYHYVEIMACPSGCLNGGGQIRPK------STLLASELLSNVTKCFEQLHLRDPMANPAVKLVYDKYLDGMPFSKLAREVLHTRYHAVPKLEQLNPLGIKW 527          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: K3WYN8_GLOUD (Fe_hyd_SSU domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYN8_GLOUD)

HSP 1 Score: 209 bits (531), Expect = 9.360e-55
Identity = 146/371 (39.35%), Postives = 190/371 (51.21%), Query Frame = 1
Query: 1012 PFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            PF+ T KSPQQ+ G L K +                        VSR ++ A N                          V+HV++  C+DKKLEASRKDF  ++ +   +VD VL T E++ELI    ++ +    S  PA                   +  P      +  + +S DG ++ G      +   +SGG LE++FR+AA ELF VD+ G PL Y  GRN DFRE +L + GQ VL+FA AYGFRNIQSI+ K RR KCPYH+VE+MACPSGC+NGGGQIKPK       T L  E ++ V    +E +V R P DNP  + VY +   G P    AR+  HT YH VPKLE SNP    W
Sbjct:  243 PFIDTTKSPQQIAGSLVKHM------------------------VSREQNIAPNE-------------------------VYHVAVMPCFDKKLEASRKDFLSEEFNV-KDVDCVLATTEIIELI----ASLNVDFMSLEPA-------------------VLSPQE----IMLSGISEDGSAVLG-----SSVNASSGGPLEHIFRYAAKELFNVDVNG-PLEYVVGRNPDFREVTLVIEGQEVLKFAIAYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPK------STLLASELLANVTSRFQELQV-RAPTDNPACKYVYEKYFAGQPFSDAARQAFHTRYHAVPKLEQSNPLGIKW 523          
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Match: A0A3R7KXU8_9STRA (Fe_hyd_SSU domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KXU8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.160e-53
Identity = 150/372 (40.32%), Postives = 184/372 (49.46%), Query Frame = 1
Query: 1012 PFMSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFRHQDLDGDAEVDLVLTTAEVLELIEE-SASAADATLASTSPASPSRDAASDYFRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYLEYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAYGFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEV---LREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSYHNVPKLELSNPHMSPW 2115
            PF+ T KSPQQ+ G L KR                               S   G TP         +D           V+HV++  C+DKKLEASRKDF+  + +   +VD VL T E+++LIE      A   LA+ SP                              V  + VS DG S+ G           SGG LE++FR AA ELF V++ G PL Y  GRN DFRE SL V G+ VL+FA AYGFRNIQSI+ K RR +CPYH+VE+MACPSGC+NGGGQIKPK       T L  E +  V    +E  V   P  N  V+ VY + +GG P    AR +LHT YH VPKLE SNP    W
Sbjct:  244 PFIDTTKSPQQIAGSLIKRFV-----------------------------SGERGVTP---------ID-----------VYHVAVMPCFDKKLEASRKDFQDPEHET-KDVDCVLATTEIIDLIESLGIDFASLELANLSPEE----------------------------VMLSGVSEDGSSVLG-----SNLNATSGGQLEHIFRFAAKELFNVEVNG-PLEYMAGRNPDFREVSLVVEGKEVLKFAIAYGFRNIQSIMTKIRRNRCPYHYVEIMACPSGCLNGGGQIKPK------STLLASELLDNVTSRFQELHVCE-PVANLAVKYVYEKYLGGAPFSEAARSVLHTQYHAVPKLEQSNPLGIKW 524          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYB4_ECTSI1.510e-24575.46Fe_hyd_SSU domain-containing protein n=2 Tax=Ectoc... [more]
A0A0P1AVH7_PLAHL2.270e-5847.75Nuclear architecture related protein n=1 Tax=Plasm... [more]
A0A5D6XLY1_9STRA2.390e-5747.62Fe_hyd_SSU domain-containing protein n=1 Tax=Pythi... [more]
H3GG46_PHYRM7.610e-5748.11Fe_hyd_SSU domain-containing protein n=19 Tax=Phyt... [more]
A0A662WUJ6_9STRA2.030e-5647.28Fe_hyd_SSU domain-containing protein n=2 Tax=Notho... [more]
A0A3M6VN20_9STRA6.020e-5645.02Fe_hyd_SSU domain-containing protein n=1 Tax=Peron... [more]
M4BN82_HYAAE1.300e-5541.03Fe_hyd_SSU domain-containing protein n=1 Tax=Hyalo... [more]
A0A484EG90_BRELC7.450e-5544.26Fe_hyd_SSU domain-containing protein n=1 Tax=Bremi... [more]
K3WYN8_GLOUD9.360e-5539.35Fe_hyd_SSU domain-containing protein n=1 Tax=Globi... [more]
A0A3R7KXU8_9STRA2.160e-5340.32Fe_hyd_SSU domain-containing protein n=3 Tax=Phyto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig108contigEcto-sp6_S_contig108:541668..547567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score702.6
Seed ortholog evalue9.8e-200
Seed eggNOG ortholog2880.D7FYB4
Model size2792
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009628,GO:0016491,GO:0016651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051540,GO:0055114,GO:0070482
Exons6
EggNOG free text desc.iron-sulfur cluster assembly
EggNOG OGsCOG4624@1,KOG2439@2759
Cds size1101
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig108.1167.1prot_Ecto-sp6_S_contig108.1167.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig108 543845..546893 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348771.3295295-UTR-Ecto-sp6_S_contig108:541667..5418971682348771.3295295-UTR-Ecto-sp6_S_contig108:541667..541897Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig108 541668..541897 +
1682348771.3410866-UTR-Ecto-sp6_S_contig108:542643..5428341682348771.3410866-UTR-Ecto-sp6_S_contig108:542643..542834Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig108 542644..542834 +
1682348771.3507733-UTR-Ecto-sp6_S_contig108:543248..5438441682348771.3507733-UTR-Ecto-sp6_S_contig108:543248..543844Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig108 543249..543844 +
1682348771.3958793-UTR-Ecto-sp6_S_contig108:546893..5475671682348771.3958793-UTR-Ecto-sp6_S_contig108:546893..547567Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig108 546894..547567 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348771.3578196-CDS-Ecto-sp6_S_contig108:543844..5438711682348771.3578196-CDS-Ecto-sp6_S_contig108:543844..543871Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 543845..543871 +
1682348771.3671892-CDS-Ecto-sp6_S_contig108:544557..5452411682348771.3671892-CDS-Ecto-sp6_S_contig108:544557..545241Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 544558..545241 +
1682348771.3747637-CDS-Ecto-sp6_S_contig108:546108..5463121682348771.3747637-CDS-Ecto-sp6_S_contig108:546108..546312Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 546109..546312 +
1682348771.3843-CDS-Ecto-sp6_S_contig108:546707..5468931682348771.3843-CDS-Ecto-sp6_S_contig108:546707..546893Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 546708..546893 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig108.1167.1

>prot_Ecto-sp6_S_contig108.1167.1 ID=prot_Ecto-sp6_S_contig108.1167.1|Name=mRNA_Ecto-sp6_S_contig108.1167.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=367bp
MSTVKSPQQMMGVLAKRVFPRAWNHPQPSVATAAAVTAAADEVSRVRDSA
SNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASRKDFR
HQDLDGDAEVDLVLTTAEVLELIEESASAADATLASTSPASPSRDAASDY
FRRHCPPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSGGYL
EYVFRHAAVELFGVDLAGRPLVYREGRNADFRETSLEVNGQVVLRFAYAY
GFRNIQSILAKARRGKCPYHFVEVMACPSGCVNGGGQIKPKKKEGPRDTR
LRVERVSEVLREGRVPRGPRDNPVVQAVYSELVGGGPGESRARELLHTSY
HNVPKLELSNPHMSPW*
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mRNA from alignment at Ecto-sp6_S_contig108:541668..547567+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig108.1167.1 ID=mRNA_Ecto-sp6_S_contig108.1167.1|Name=mRNA_Ecto-sp6_S_contig108.1167.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5900bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:541668..547567+ (Ectocarpus species6 EcLAC_371)
GCCAGGTCCTCACAAGCTGCTACCATTATCTTGCAGCAGGCATGGCGTCG GTGCTGCTGGGAGACCTCGATGACTTCATCGCCCCAGGGCAGGCATGCAT CAATCCACTCTTCACGACCGCTGCCGATTCGGCTCCAGCAACAGCAGCAG CAGCTGAATCGGCGGGCAGCAAGGGCGGAGCTGCGATGGTGCTGGAAATA GAAGATGACGGAGGGCCGCTGGATGCCATGGTGTGTGTGCACATGTGTAC AGTAGGCGTGTAGGCTCTACGATAAAACAAAGCCAGGGACGGAGTGTACG TAGAGTGAAATGTGCTGACCTGGCTCTATCCATTTCTCCAATCCAGTTTT ATCTGGGGTCTGCTCACGGCTCACAAAAACTGCTGCAGTCTCTCGCCATC TGGCAGTCCACCGATGGTACCTATCCAGGCACCCTTGTTGTACATAAGTC TTGCAGTGACTTCCCCGCCAAGATGTGACACACGGGTTCATGGCGTACAA CATGGGCCTAGTGTAATCGATGCAGTTCGTTGTAGGATAGCAGCAATAGT GTAAGATCATATTTCAAATAGCGCCATCTCCTGTAAACCCAACGCAACAA CAGCAGTGGTTGTTCAACAACCCAGCGAGTAGCGCCACGAGCCACGAGAC AACGAACAGCAACACAAAGGTATGTAGATGTAGGGCACGCTTTGCATAGA TGTGAACCCACCGCTGTGTCTATGTACTTCGCGGAGTGGTCTGTCACTCA CGCATCCTCCAGTGCACCGAGCACCGGCGTTGTGACGTCGATTTCTCGAT CCTCCATCACCACCGGCAACTTCCAAAAACCAGGTCCTTGAACATTTCAA AACTTTACACAATTTTTAAAACTATTTCAACATACCCCCTGACTGGTGTG GTGTTATCTCGAACGGGTAGTGTACGGATATTTTCTACAAAAAAATCAAT AACACTCCCACGTTGAACACCAGCAGGCGGTGGAAGAAGTGGTCAAGCCG GACCTGATACGGGCCTCCAACACTCAGACCGCCAAGGTCTCCTTGGACGA CTGCCTCGCGTGCAGCGGCTGCGTGACCTCGGCGGAAACCGTCCTCATCA CCCAGCAGAGCACCGGCAAGCTGAGGGAAGCCGTGGCGTCCGGAAGGCGA GGAAACAGAGAATTTGTGTGTGCCCTTTGTAATCCCAAACATGCTGTGTA GGCGGAGTTTACAACTTTCGGTGTTTACATTATTTTTTCGCACCAATCGG GGTTACACAGGAGGAAGCCCGCTTACCGGCATTCCCTTGGTTGTGCCGTG CTCGAGAGCAGGAAATTACCTCCCTGCGCGTCCCTTCGTGAGTCGTGAGC CCTGGGGAAGGACGGAGAGAGGTCGTGTTGACAAAACTCCTTCACCACGT CGCGTGTACACGGCCGCTGGCCCTGGATTCCCAAGCTCGCCACGACATCG CCCGCATTCCCTCGGCACACTCGTAGAAGAGTGGAAAATAATCGCAAGTG TCAGGGCCACCGCCTGCCCTCGCATTCCCGACAGCCCACCTTCCCTTTTC ATTCCATGAACCCCCTGCCCCTTCCTTCCAGGTACTCCGTTGTCGTGGCG TCGATTACGCCTCAGGCCCGAGCCTCCCTGGCGGAGCGGTTCGGGCTATC CCCCGCCGAGACTCACGCCCGCCTGCTCGCGTTCCTGAGGGAGCGGCACG GCGTCCACCACCTCGTTGACTCTTCTCTAGGCGCCGACTTCTCCCCTCCT CGAGGCTGGAGAGGAGTTTGTTCAGCGGTGGCGGAGTATCAACAGCGGGC GGTCAGGTTCCGAGGGGGTCGGGCTCAACCGGGAGCTGCGGTGGGTGAGG GGGCGCCAGCACGGCCGCCGTTGGCAGCCTGGGTCGCGCCCCCGCCTACA GTTGCGCTTTCGTCAACGCGGAGGTTCAACGTCGAGCTGGGAGAGGAGGA AGAGAACAGAATGCAGCAACAGCGGCAAGGGCAAGATTCCAACTGCGCCA GTGGTGTTGTTTCGGGAAGAGGGAAAGAGGGCGAGGGAGCCGCGCGTGAT TCGATGGCGGTGGAAGAGGAGTGCGCGAGACGGCCACGAGGGCCGGGAGA GCTTTTTTGGTGCTGACGTCGGCCTGCCCCGGGTGGGTGTGCTACGCGGA GAAGACGGCGCCTGAGGCGCTCCCTTTATGAGCACAGTCAAATCGCCGCA GCAGGTATGACGTGCATGGCGCGAGATGACTGCATGCCACCGTCGGCTGT AGACTCTAGCAAATGGCTGCGTCCAACGCCCTCATATATTCACTTGCCTA TGAAACCCAGCTTCTTTGTCGCGTGTGCTACCTTTGTCAAGGCTGGGATG TTGCCGGGGCCGAGAGGAAAACCTTCGTGTTGGGGTTGTCGTTACTGCGG CGGTTGCGGGGAGGGGGAGGTGTCGACGTATTTCATATAAATCGCGTCTA TAAAAAACGAGAAGTGAAGCATCCACCGGGTGGGGCATCACTTCGCTGCA GGCTCGCCTCAAAAGCGTAGCAAAAAGGAACGGTTATATATACCACGTCA TGAAGTAAACGCACGTTCCATCCGGGCTCCATTTCTCTCCTCACGGTGCC GCCTCGCAACTTGTGGTGCCAAGAGTGAGGTCTTTCGATAGGCGATGATA GGCGGTGGGCCGACGATATCGCCAGCGCCCAGAAATAAGAGCTACGACGA TTCATCATCGGACGGTTTTGTGGTGAATCAGGGTTGCTTGCGGGTCGCAG GCTTCGGTGGAGACTTTTCTGTGAAGGTTCTGCCATATTGTACGTTTGGC AGCTGTGGGTCGTGGCACAGTTAAGAATCTCATGCATCAAGTTATTCTTT GCTAACCCTGTGCCTTGTCGTACAATTGTGTTCGTCGCAGATGATGGGAG TGCTGGCGAAACGGGTGTTTCCGCGCGCTTGGAACCACCCGCAACCGTCG GTTGCCACCGCTGCCGCCGTTACGGCAGCAGCAGACGAGGTCTCGCGGGT TCGGGATAGTGCTAGCAACGGCGCGAcCCCTGCCGCTTCCAcCCTAGCCA ACGAGACGCTCGACCAAAGCACGCCACCTCCTGTTCGATCGCGGGGTGTG TTCCACGTGTCGATCGCGCAGTGCTACGACAAgAAGTTGGAAGCCTCCCG CaAGGACTTCCGGCACCAAGACTTGGATGGCGACGCCGAGGTTGACCTTG TCCTCACTACCGCGGAGGTGCTCGAGCTTATCGAGGAAAGCGCTTCCGCT GCGGACGCCACCTTGGCTTCTACGAGCCCGGCGAGCCCGAGCCGTGACGC AGCCAGCGATTATTTCCGACGGCATTGTCCCCCCGGGGACCTTGCGGAGC CGCTCGCTCCCGGGTTTCCGGTAGGGCAGGCGGCGGTGAGCGTGGACGGG TTATCGCTTTTCGGCGGCGTTGACgGGGAAGGGGCGGCCGGCGGGAATTC TGGCGGGTATTTGGAATATGTGTTCCGGCACGCGGCGGTCGAGCTGTTCG GAGTGGATTTGGCGGGTAGACCGCTCGTGTACCGTGAGGGTCGGAACGCC GACTTCAGGGAGACGAGTCTAGAGGTACGGCTGGCGGTAACAAGTAAGGC TTGTACAGATTTGTATAATTTTCTTCTTTATTCGATGAGGTTCGCTGGGC TGTTGGAGTCGAAAACACGTCAGCTGTGTAAGCTGTTCAAGCGTGGGAAG CATCACTGATGGCAGCTTGCAGCTGATTCACACCGACAAGTGTATGCTTT GCTTTCGTCTTGCGCCACGCCTTGATGACACAATTACTATGCTCTGATGA GCCCACTCCGGAGCGCGCCTTGTACCTACCTAGGAATCGGACGTCGAAGC GAAGTTGGTAGTCCTCTTGTGGAGCCGGTAGAAGTGCAGAATTTCATCGT CAGACCGAGTCTGTCTGTATGCTTTCGATACTGCCACCATCCCGTGAACA TCGCTGTCTGGCTGGCAATGATTGTGCGCGGCGTAAACTGAGGCTGCATT GGTTTTCTTGTCATTTTTTCTGTCACGTAGACTTGATTCCCATCCGTGGA GCTGTCTCAATTGTTCAATTCCTTCACGAAAAAAAATAAAATGGGCGGTT AGTGTACATCCAAACTAGTCTGGCAACACGGAAGAACGCACATCGCAGTA CAACCGCCTGTTGGGGTCATTCGACCACAGCCTATCGCCCGTCGGATAGA TCTGTCTCTGCCCCCCTTTACCGCTATCTATTGCTCCCTGTACTTGATAC AACATCGCTTTCGCTCACGTGCGTACAACAATGGCTTGTCCATCGCCGGA CTGGATGCGACCGCGCGCCCTCTCGTGCTGAAATACCGTCCGGACGAGTA TGTGGCGCTCCTCGAAGCATGTTCCAAAGCCCGCACCTCAGCAACCTCTA ATTTCCTGATGCTGTGCTTATTTTCGATATCGTGTTCCAAGGTCAATGGG CAAGTGGTCCTGCGCTTCGCGTACGCCTACGGCTTCCGAAATATCCAGTC CATCCTGGCCAAGGCCAGACGTGGGAAGTGCCCCTACCACTTCGTGGAGG TGATGGCGTGCCCATCGGGGTGCGTCAACGGGGGCGGGCAGATCAAACCC AAGAAAAAGGAGGGACCGCGCGACACTCGACTGAGAGTGGAAAGGGTGAG GGGGTTTCGAACATTCTGTTGTTGGCCAAGTACTGTGGAACTTGCAGTAC GTCAGTTTCGCATCGTTTTGAAGTACTAGGAGATATCGAGCGTAAAGACG CAGCCGCGCTATGTATCGCTACAAAGGAACCAAAACCTGTGACATTGAAT GACAGTATGTCGACGCGGTTTCTGTTCGCCTTGCCATGTTGATTTTCGTA CGGCTAGGTGCGTTCGTATCCCATTAAAACTTCCCCGCTCATCGCGTTTG AGAGCTGAGATGCTGGGTGGCACGCGTGTCGCATGTCGTTCCCCGACGCC TCCCCCACATATGACCGAGCGGTTTTGATACGAACACGAAGTATCCATCA CCCCACCGCCCCGTTCGCATTTTTCCTGGACCAACCCAAGGTGTCGGAAG TCTTGAGGGAGGGACGTGTACCCCGAGGTCCTCGCGACAATCCCGTGGTC CAAGCGGTGTACTCGGAGCTGGTCGGAGGGGGTCCTGGGGAGAGCAGAGC gaGAGAGCTCCTACACACCTCGTACCATAACGTCCCGAAGCTGGAGCTGT CCAACCCTCACATGTCGCCCTGGTGACCGTATCGATCGACCGCTTGATCG CTACCGATGGTGTCTTTCGGTTTCTCAGTCTTGCCGCTATGACGTAATGC AGTATGAGTGTGTGTAACGGCAGCGAGGCATACTTTTCTGAAGGCTGTGG TACGGTTTTGGTGGTGCGACTAGGAGGGGAGGtTTTTCTCCATCAGCGTC CTTGGATTGTGCCGGCGTGGGTAAACAGGACTTCGGCTACGTGATACGTT GTTGTGCGCATGGTCCACGCGAACAGGCGAGCGGCGAGTGGCGAGAGAGA GAGTCCACCACACTCCGCGGGTGGTTGCGCGTGGCGCGTGCATGTGACTG GTGTGATGCGTGCGCTTTGTGTGTGCCACGCTCACGCGTTTTTGTTAACT AGTCTAGAAAGCCTCCGTGCCCAGGTGTTTCCATGAATCGCAAAGACCCC GGGTTTCACCTGCGCATACAGACAACGCGTGTGTACAGCTAAACGAGAGG GGGGTAGCGAAAGTACCAAGCATAGAGTGGGTAAAAGAGGAGTGCTACTC TATCTGCAACGGTGTGTTGATGACTACGGAAGGGCTCACAAATGTGTTTT TCTTTGCCAAATGCTGGCGTCCGTTCCGCCTGGAACAATGTCCAGAGAGT GGTTGTATCAAGATTAGCTGCTGGCTTGGATAAAAGATCTCGGACACATA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig108:541668..547567+

>mRNA_Ecto-sp6_S_contig108.1167.1 ID=mRNA_Ecto-sp6_S_contig108.1167.1|Name=mRNA_Ecto-sp6_S_contig108.1167.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:541668..547567+ (Ectocarpus species6 EcLAC_371)
ATGAGCACAGTCAAATCGCCGCAGCAGATGATGGGAGTGCTGGCGAAACG
GGTGTTTCCGCGCGCTTGGAACCACCCGCAACCGTCGGTTGCCACCGCTG
CCGCCGTTACGGCAGCAGCAGACGAGGTCTCGCGGGTTCGGGATAGTGCT
AGCAACGGCGCGAcCCCTGCCGCTTCCAcCCTAGCCAACGAGACGCTCGA
CCAAAGCACGCCACCTCCTGTTCGATCGCGGGGTGTGTTCCACGTGTCGA
TCGCGCAGTGCTACGACAAgAAGTTGGAAGCCTCCCGCaAGGACTTCCGG
CACCAAGACTTGGATGGCGACGCCGAGGTTGACCTTGTCCTCACTACCGC
GGAGGTGCTCGAGCTTATCGAGGAAAGCGCTTCCGCTGCGGACGCCACCT
TGGCTTCTACGAGCCCGGCGAGCCCGAGCCGTGACGCAGCCAGCGATTAT
TTCCGACGGCATTGTCCCCCCGGGGACCTTGCGGAGCCGCTCGCTCCCGG
GTTTCCGGTAGGGCAGGCGGCGGTGAGCGTGGACGGGTTATCGCTTTTCG
GCGGCGTTGACgGGGAAGGGGCGGCCGGCGGGAATTCTGGCGGGTATTTG
GAATATGTGTTCCGGCACGCGGCGGTCGAGCTGTTCGGAGTGGATTTGGC
GGGTAGACCGCTCGTGTACCGTGAGGGTCGGAACGCCGACTTCAGGGAGA
CGAGTCTAGAGGTCAATGGGCAAGTGGTCCTGCGCTTCGCGTACGCCTAC
GGCTTCCGAAATATCCAGTCCATCCTGGCCAAGGCCAGACGTGGGAAGTG
CCCCTACCACTTCGTGGAGGTGATGGCGTGCCCATCGGGGTGCGTCAACG
GGGGCGGGCAGATCAAACCCAAGAAAAAGGAGGGACCGCGCGACACTCGA
CTGAGAGTGGAAAGGGTGTCGGAAGTCTTGAGGGAGGGACGTGTACCCCG
AGGTCCTCGCGACAATCCCGTGGTCCAAGCGGTGTACTCGGAGCTGGTCG
GAGGGGGTCCTGGGGAGAGCAGAGCgaGAGAGCTCCTACACACCTCGTAC
CATAACGTCCCGAAGCTGGAGCTGTCCAACCCTCACATGTCGCCCTGGTG
A
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