mRNA_Ecto-sp6_S_contig108.1132.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig108.1132.1
Unique NamemRNA_Ecto-sp6_S_contig108.1132.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: D7FY76_ECTSI (Serine O-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY76_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 5.130e-161
Identity = 305/321 (95.02%), Postives = 308/321 (95.95%), Query Frame = 1
Query:    1 DMFLLTAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTCTGKDVTGAAICELYRRLNKVEKGGDAVVGPQRREEADVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-FDAPVPTSLPPTSESGIGQILYSQNILKEIAVN 960
            DMFLL AAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAA+ISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDIT+EDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTCTGKDVTGAAICEL+RRLNKVEKGGDAVV           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK FDAPVPTSLPPTSESGIGQILYSQNILKEIAVN
Sbjct:    2 DMFLLKAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAKISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITIEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTCTGKDVTGAAICELHRRLNKVEKGGDAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKFDAPVPTSLPPTSESGIGQILYSQNILKEIAVN 322          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A6H5KDD3_9PHAE (Serine O-acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD3_9PHAE)

HSP 1 Score: 453 bits (1166), Expect = 4.770e-158
Identity = 248/327 (75.84%), Postives = 259/327 (79.20%), Query Frame = 1
Query:    4 MFLLTAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTCTGKDVTGAAICELYRRLNKVEKGGDAVVGPQRREEADVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK--------FDAPVPTSLPPTSESGIGQILYSQNILKEIAVN 960
            MF+LTAAA+VLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRL MS VRYATSIDIHPAAQIS EGVLIDHGAALV+        RVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILC GTC+GK+VTGAAICEL++RLNKVEKG DAVVGPQRRE+ADVA           XXX                                         FDAPVP+SLP T ESGI QILYS+NIL+EIAVN
Sbjct:    1 MFVLTAAAVVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLVMSFVRYATSIDIHPAAQISREGVLIDHGAALVIGATAIIGARVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCHGTCSGKNVTGAAICELHKRLNKVEKGSDAVVGPQRREDADVAGGQHVDKSQQQXXXQRGPQGDVEGTEASSLAWPVSDVTIIPSPSSENNHQQQKETFDAPVPSSLPSTLESGIRQILYSRNILEEIAVN 327          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: D7FY75_ECTSI (Serine O-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY75_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 2.230e-79
Identity = 130/138 (94.20%), Postives = 130/138 (94.20%), Query Frame = 1
Query:    1 DMFLLTAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKV 414
            DMFLLTAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVV        RVTLYHGVTLGNSGKKV
Sbjct:    2 DMFLLTAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVGATAIIGARVTLYHGVTLGNSGKKV 139          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A7S2V0R1_9STRA (Serine O-acetyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0R1_9STRA)

HSP 1 Score: 194 bits (494), Expect = 9.140e-57
Identity = 96/206 (46.60%), Postives = 140/206 (67.96%), Query Frame = 1
Query:   67 YRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTC--TGKDVTGAAICELYRRLNKVEKGGD 678
            ++ + ND  +I  DPAL+S LE+L+ YPGFWALF+YRLSH ++   IP    ++PR+ M ++R  T++DIHP A+IS+EGV IDH   +V+          T+YH VTLG +GK +  G +RHP +G   ++GAGAK+LG IT+ D+  VGANSVVTKS+P + TA+G+PA ++ +  C  T  D    A+CEL+RR+ ++E+  D
Sbjct:   21 WKGIKNDFMMIHKDPALESSLEILFCYPGFWALFFYRLSHVIVKWKIP----LIPRIIMGMIRIMTAVDIHPRAKISDEGVFIDHATGVVIGETAEIGAGTTIYHQVTLGGTGKIMHRGQRRHPIVGKNCMIGAGAKLLGAITIGDNCQVGANSVVTKSIPDNCTALGIPATVVRKVKCPLTMNDPVSKAVCELHRRVVELEEALD 222          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A7S4D9L5_HETAK (Serine O-acetyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9L5_HETAK)

HSP 1 Score: 171 bits (433), Expect = 8.000e-47
Identity = 88/178 (49.44%), Postives = 118/178 (66.29%), Query Frame = 1
Query:   55 LGSCYRAVLNDARIISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARIL 588
            L + +  ++NDA++I  DPAL S LE+ + YPGFWALF+YR+ HA+    IP    ++PR+ M  VR+ T++DIHPAA+ISE GVL DH    V+        R T+YH VTLG SGK V  G +RHP +G   ++G GAK+LG I V D+  VGANSVVTK++P    A G+PA I+
Sbjct:   19 LANVFVGIVNDAKMIYEDPALGSFLEIFFCYPGFWALFFYRICHAMWYFKIP----LLPRVIMGFVRFWTAVDIHPAAEISEGGVLFDHATGTVIGATAGIGARTTIYHQVTLGASGKPVPKGQRRHPIVGANCMIGCGAKVLGAIRVGDNCKVGANSVVTKALPDGAMACGIPAVII 192          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A6S6S5N4_9PROT (Serine acetyltransferase n=3 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6S5N4_9PROT)

HSP 1 Score: 154 bits (388), Expect = 9.280e-42
Identity = 87/161 (54.04%), Postives = 107/161 (66.46%), Query Frame = 1
Query:  106 DPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARIL 588
            DPAL SK E+ + YPG WALF++R++H+L  R +      +PR      R  T++DIHPAAQI E  V IDHG  +V+         V +Y  VTLG  G   S G KRHPT+G+RVV+GAGAKILG+IT+ DD  VGANSVV K+VP   TAVGVPARIL
Sbjct:   18 DPALHSKFELFFNYPGLWALFYHRIAHSLYKRGL----RFIPRFISGFNRLVTTVDIHPAAQIGER-VFIDHGTGVVIGETAIIGNDVVIYQQVTLG--GVSTSHG-KRHPTVGNRVVIGAGAKILGNITLGDDAKVGANSVVVKNVPCCATAVGVPARIL 170          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A7C5B1D1_9BACT (Serine acetyltransferase n=6 Tax=Nitrospirae TaxID=40117 RepID=A0A7C5B1D1_9BACT)

HSP 1 Score: 152 bits (385), Expect = 1.640e-41
Identity = 83/175 (47.43%), Postives = 116/175 (66.29%), Query Frame = 1
Query:   67 YRAVLNDAR-IISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARIL 588
            + A+  D + +   DPA  SKLEV+  Y GF AL  YRLSH L + ++P    ++PR+   + R+ T ++IHP+A+I   G  IDHG  +V+         VTL+ GVTLG +GK+    GKRHPT+G+ VV+GAGAKILG IT+ D+V +GANSVV K+VP + T +GVPAR++
Sbjct:    2 FAAIKQDLQAVFDRDPAATSKLEVILTYAGFHALLAYRLSHWLKLHHVP----ILPRVISQLARWLTGVEIHPSAKIGT-GFFIDHGMGVVIGETAEIGDYVTLFQGVTLGGTGKER---GKRHPTLGNHVVVGAGAKILGGITIGDNVKIGANSVVLKNVPPNSTVIGVPARVI 168          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A1W1IBL5_9BACT (Serine acetyltransferase n=1 Tax=Nitrospira japonica TaxID=1325564 RepID=A0A1W1IBL5_9BACT)

HSP 1 Score: 152 bits (384), Expect = 2.380e-41
Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 1
Query:   67 YRAVLNDAR-IISLDPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARIL 588
            ++A+  D + +   DPA   ++EV+  Y GF AL  YR++H L +RN+P     +PRL   I R+AT I+IHP+A+I   G  IDHG  +V+         VTL+ GVTLG +GK+    GKRHPT+G+ V++GAGAKILG IT+ D+V +GANSVV KSV  + T VGVPAR++
Sbjct:    2 FKAIRQDLQAVFDRDPAATGRMEVVVTYAGFHALVAYRVAHWLKVRNVP----FIPRLISQIARWATGIEIHPSAKIGT-GFFIDHGMGVVIGETAEIGDHVTLFQGVTLGGTGKER---GKRHPTLGNHVLVGAGAKILGGITIGDNVKIGANSVVLKSVSPNSTVVGVPARVI 168          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A0C2V7M3_9PROT (Serine acetyltransferase n=1 Tax=Sulfuricurvum sp. PC08-66 TaxID=1539066 RepID=A0A0C2V7M3_9PROT)

HSP 1 Score: 152 bits (385), Expect = 2.740e-41
Identity = 90/183 (49.18%), Postives = 118/183 (64.48%), Query Frame = 1
Query:   61 SCYRAVLNDARII-SLDPALQSKLEVLYAYPGFWALFWYRLSHALLM-RNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTC 603
            S + ++  D R++   DPA  S +E+L++YPG WALFWYRL+H L   R +  L     RL  S+ +  T+IDIHP A I +  V IDHG  +V+         V +Y GVTLG  G  + PG KRHPTI   VV+GAGAKILG+IT+ ++  VGANSVV K+VP H TAVGVPAR++ +G C
Sbjct:    2 SLFSSIREDFRVVYQNDPAAHSWIELLFSYPGVWALFWYRLAHPLCKYRYLKPLG----RLIASLSQILTNIDIHPCAVIGQR-VFIDHGIGVVIGETAIVEDDVLIYQGVTLG--GVSLEPG-KRHPTIKRGVVIGAGAKILGNITIGEESKVGANSVVVKNVPPHSTAVGVPARVVNKGRC 176          
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Match: A0A6S6TSK6_9PROT (Serine acetyltransferase n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6TSK6_9PROT)

HSP 1 Score: 152 bits (384), Expect = 3.650e-41
Identity = 96/213 (45.07%), Postives = 121/213 (56.81%), Query Frame = 1
Query:  106 DPALQSKLEVLYAYPGFWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEEGVLIDHGAALVVXXXXXXXXRVTLYHGVTLGNSGKKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTCTGK-------DVTGAAICELYRRLNKVE---KGGDAVVGPQRREEAD 714
            DPAL SK E+ + YPG WALF++R++H+L  R +      +PR      R  T+IDIHPAAQI E  V IDHGA +V+         V +Y  VTLG     V   GKRHPT+ D VV+GAGAKILG+IT+     VGANSVV K+VP   TAVG+PARIL   T T         DV       L +R+  +E   K GD+ V  +   E +
Sbjct:   18 DPALHSKFELFFNYPGLWALFYHRIAHSLYKRGL----RFIPRFISGFSRLITTIDIHPAAQIGER-VFIDHGAGVVIGETAIIGNDVLIYQQVTLGGVSTSV---GKRHPTVEDNVVIGAGAKILGNITLHKGCKVGANSVVVKNVPAAATAVGIPARILACQTPTDNLSHNILPDVNKEIFHYLIKRIAVLEETVKTGDSKVMEKEDHELE 222          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY76_ECTSI5.130e-16195.02Serine O-acetyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KDD3_9PHAE4.770e-15875.84Serine O-acetyltransferase n=1 Tax=Ectocarpus sp. ... [more]
D7FY75_ECTSI2.230e-7994.20Serine O-acetyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A7S2V0R1_9STRA9.140e-5746.60Serine O-acetyltransferase n=1 Tax=Fibrocapsa japo... [more]
A0A7S4D9L5_HETAK8.000e-4749.44Serine O-acetyltransferase n=1 Tax=Heterosigma aka... [more]
A0A6S6S5N4_9PROT9.280e-4254.04Serine acetyltransferase n=3 Tax=uncultured Sulfur... [more]
A0A7C5B1D1_9BACT1.640e-4147.43Serine acetyltransferase n=6 Tax=Nitrospirae TaxID... [more]
A0A1W1IBL5_9BACT2.380e-4148.00Serine acetyltransferase n=1 Tax=Nitrospira japoni... [more]
A0A0C2V7M3_9PROT2.740e-4149.18Serine acetyltransferase n=1 Tax=Sulfuricurvum sp.... [more]
A0A6S6TSK6_9PROT3.650e-4145.07Serine acetyltransferase n=1 Tax=uncultured Sulfur... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig108contigEcto-sp6_S_contig108:132596..135337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score243.0
Seed ortholog evalue1.8e-61
Seed eggNOG ortholog2880.D7FY75
Preferred nameSAT
Model size963
KEGG rclassRC00004,RC00041
KEGG koko:K00640
KEGG ReactionR00586
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111
KEGG ModuleM00021
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.serine O-acetyltransferase activity
EggNOG OGsCOG0110@1,KOG4750@2759
Ec32 ortholog descriptionSerine O-acetyltransferase
Ec32 orthologEc-24_003520.1
EC2.3.1.30
Cds size960
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348767.497399-CDS-Ecto-sp6_S_contig108:132595..1329901682348767.497399-CDS-Ecto-sp6_S_contig108:132595..132990Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 132596..132990 -
1682348767.5106683-CDS-Ecto-sp6_S_contig108:133381..1335381682348767.5106683-CDS-Ecto-sp6_S_contig108:133381..133538Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 133382..133538 -
1682348767.5203075-CDS-Ecto-sp6_S_contig108:134050..1343101682348767.5203075-CDS-Ecto-sp6_S_contig108:134050..134310Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 134051..134310 -
1682348767.5296035-CDS-Ecto-sp6_S_contig108:135186..1353341682348767.5296035-CDS-Ecto-sp6_S_contig108:135186..135334Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig108 135187..135334 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348767.5393143-UTR-Ecto-sp6_S_contig108:135334..1353371682348767.5393143-UTR-Ecto-sp6_S_contig108:135334..135337Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig108 135335..135337 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig108.1132.1prot_Ecto-sp6_S_contig108.1132.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig108 132596..135334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig108.1132.1

>prot_Ecto-sp6_S_contig108.1132.1 ID=prot_Ecto-sp6_S_contig108.1132.1|Name=mRNA_Ecto-sp6_S_contig108.1132.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=320bp
MFLLTAAAIVLAPLLLNLGSCYRAVLNDARIISLDPALQSKLEVLYAYPG
FWALFWYRLSHALLMRNIPGLSSVVPRLAMSIVRYATSIDIHPAAQISEE
GVLIDHGAALVVGATAIIGARVTLYHGVTLGNSGKKVSPGGKRHPTIGDR
VVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTC
TGKDVTGAAICELYRRLNKVEKGGDAVVGPQRREEADVAGGQQEDTIHQQ
QQQQGREASSLASPVSDVTVVPSPSSENNDQQQKKKFDAPVPTSLPPTSE
SGIGQILYSQNILKEIAVN*
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mRNA from alignment at Ecto-sp6_S_contig108:132596..135337-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig108.1132.1 ID=mRNA_Ecto-sp6_S_contig108.1132.1|Name=mRNA_Ecto-sp6_S_contig108.1132.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2742bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:132596..135337- (Ectocarpus species6 EcLAC_371)
GACATGTTTCTGCTGACAGCCGCCGCGATCGTCTTGGCGCCTCTGCTGCT CAACCTTGGGAGCTGCTATCGCGCGGTCTTGAACGACGCACGCATCATCT CGCTGGACCCTGCCCTGCAAAGCAAGCTAGAAGTGCTCTACGCGTATCCC GGTGAGTACCTCGGTACAGTAGTCGGCCTTTGCTGTCCCTAGCTGCTGTG AAGGTGTGCACGAGTGATCGGAAATATGCAGCGTTGGTATCATACCGGCA GCGTTTGTTTGGCATCTCCTCTTTATTGCACCGTTACAGCAGTAGTGGCT CGGTGCCGAACACAACAACAGCTTCCGGTGCTGGCCCGAGTTAGCCGATC CTGCTCGTGACAACGGATGGGGTGGTTTCTCTCGCTCGTATTGACTTGAA TACAAGAGAGCAAGAGAGCAAAAACACCAGACACAGCAATCTAGACTGCT GTAGACTTGTAGACGGACTGTTCATGAGTTTCGCAGAAAACACAACACGA GATATTCAGCATTACATTCTACAAGCAGTAGTTTTCGATATGCTGACCAT GAAACGCACGTGAAGCAACCTCCGTGGGCGCTCTGTATCGACAAACAAAC GCTCACAGTTTAGAGTGGTGGCAGCGACAAATCCGGTCGTTTCGTCCGTC AGGACCAAGCCAGAGAATATCGTGAATGTGGAGAACATGTCACCAGCATT TTCTATGTAGGAGAATATCTCATCACGCGGCCTGTTGTGTGTGTTGTGGA GAGCATGTCATTCAGCATCCAGCATTTGCTAGGAGACTACTGTATTCATA TCACAACGCGGTCGGGCGTGTGTGTGTTGGGCACAGCGGTGATATTGCGC GGTATGCATGCCTACGTCTGCCGTCTGCTGTCTGCTAGACTCTGTCATCG ACAGGATTGCGATGACCCTACAATATCAAGGATCCGAATCAACTCTGTCG TACCCTAGACTACAGCAGTACATGTTGGCGGTGTCTGATTCCATCAGCCC CCCGCCCCTTGAAAAATCAACCCACAGGTTTCTGGGCCTTGTTCTGGTAT CGGCTCAGCCACGCTCTTCTCATGAGAAACATCCCTGGCCTTTCCTCGGT TGTGCCAAGGCTGGCAATGTCTATTGTCCGATACGCCACCTCCATCGACA TCCACCCGGCTGCCCAAATCTCGGAAGAAGGAGTGTTAATAGACCATGGG GCCGCGTTGGTGGTCGGCGCGACGGCCATAATCGGGGCCCGGGTTACTCT GTACCACGGGGTTACGCTTGGCAACTCCGGGAAGAAGGTGTGTGCCAAAT CGGGCTGGGACAATACTGTAGACTATGTGGTTCATTCTTCGCCACACACC CCAAAATCCCCCAATCGGACGTGTATGCACACTCCTTGTCGGCGGAGGGG GGCTGGCGGCCAGAATATGACGGATGGATGTGGGGGCAAAGTATTAGAGA TGTGTATAGAGTTAGCCTGATGTGTGTATTGATTGTTAACCTCTTGACGA AAAGGCATGAAGAGTAGATGAACTGACTGTGCTTCCTTGCCCCCGCCACA AGTAGTCTAAAGCGTGATAAATAGTAATCATCCAACACATTTCTTGGAAC CTTCACACGGACTTTACCCGGAAGGCCCATGGACACTGCACCCTTCTGGA CATTCGCAAAATGAAAGGAGATACCTTCGTTTCCCGCGCTGGGCCGAACT GTGCGTTCGGCAAACAACACGCATCCTGCAGGAGAGAACCCCAATACTGA CCGCCTTGTTGCTGTCGGCATGAAATATCTTGTTGAATCGACACGACAGG TTTCCCCGGGAGGCAAAAGACATCCCACCATCGGAGACCGCGTTGTCCTC GGCGCTGGCGCAAAGATTTTGGGAGATATCACCGTCGAGGATGACGTGCT AGTGGGGGCGAACTCGGTCGTCACCAAGTCTGTGCCGAAGCACCACACCG CCGTAGGTGAGCAAACGATTCTAGCAGTAGATGCATCGGGTAAACACTCT CAAATATATATCCTGGCCTGACTCCGCGCGCCAGTGCTGTTGCTGTTGTT ATCGTGTAGAGCGTCGACGAGAGCGTAACCAGAGCAGGTGCAGGCCGTTA TGCTATCGTGAGAGAGGGGAAATTCGCGACTCCCTCACCTATTGTGATGA GGACCGTATTCTACGGCAGCAGTACGGCTGTGCCTTTGCTCAGCAGCGTT CTGTTGCCGACATCAACTCTCTGTACTTTGGCTTCTCGTGGGTTCAACGT GGTGGTTTGTATTCAATTTTCTGAGACCATCAACAACCACTAATGTATCG ACATGTGTACTTTTACATCTGCTTTTAACGGTCCGGCGCGTACACAGGTG TGCCCGCGAGAATACTCTGCCGTGGCACCTGTACAGGAAAGGATGTGACG GGAGCGGCGATCTGCGAGCTTTACAGGCGTCTCAACAAGGTCGAAAAGGG TGGCGACGCCGTCGTAGGCCCTCAAAGACGAGAAGAAGCGGATGTCGCGG GCGGACAGCAGGAGGACACAATACACCAGCAGCAGCAGCAGCAGGGGAGG GAAGCTTCGTCGTTGGCGTCGCCGGTGTCTGACGTCACGGTCGTTCCTTC GCCTTCGAGCGAAAACAACGATCAGCAGCAGAAGAAGAAGTTCGATGCAC CTGTACCCACGTCGTTGCCACCAACATCAGAGAGCGGCATCGGGCAAATT TTGTACAGCCAAAACATCCTCAAGGAGATTGCTGTGAACTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig108:132596..135337-

>mRNA_Ecto-sp6_S_contig108.1132.1 ID=mRNA_Ecto-sp6_S_contig108.1132.1|Name=mRNA_Ecto-sp6_S_contig108.1132.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=960bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:132596..135337- (Ectocarpus species6 EcLAC_371)
ATGTTTCTGCTGACAGCCGCCGCGATCGTCTTGGCGCCTCTGCTGCTCAA
CCTTGGGAGCTGCTATCGCGCGGTCTTGAACGACGCACGCATCATCTCGC
TGGACCCTGCCCTGCAAAGCAAGCTAGAAGTGCTCTACGCGTATCCCGGT
TTCTGGGCCTTGTTCTGGTATCGGCTCAGCCACGCTCTTCTCATGAGAAA
CATCCCTGGCCTTTCCTCGGTTGTGCCAAGGCTGGCAATGTCTATTGTCC
GATACGCCACCTCCATCGACATCCACCCGGCTGCCCAAATCTCGGAAGAA
GGAGTGTTAATAGACCATGGGGCCGCGTTGGTGGTCGGCGCGACGGCCAT
AATCGGGGCCCGGGTTACTCTGTACCACGGGGTTACGCTTGGCAACTCCG
GGAAGAAGGTTTCCCCGGGAGGCAAAAGACATCCCACCATCGGAGACCGC
GTTGTCCTCGGCGCTGGCGCAAAGATTTTGGGAGATATCACCGTCGAGGA
TGACGTGCTAGTGGGGGCGAACTCGGTCGTCACCAAGTCTGTGCCGAAGC
ACCACACCGCCGTAGGTGTGCCCGCGAGAATACTCTGCCGTGGCACCTGT
ACAGGAAAGGATGTGACGGGAGCGGCGATCTGCGAGCTTTACAGGCGTCT
CAACAAGGTCGAAAAGGGTGGCGACGCCGTCGTAGGCCCTCAAAGACGAG
AAGAAGCGGATGTCGCGGGCGGACAGCAGGAGGACACAATACACCAGCAG
CAGCAGCAGCAGGGGAGGGAAGCTTCGTCGTTGGCGTCGCCGGTGTCTGA
CGTCACGGTCGTTCCTTCGCCTTCGAGCGAAAACAACGATCAGCAGCAGA
AGAAGAAGTTCGATGCACCTGTACCCACGTCGTTGCCACCAACATCAGAG
AGCGGCATCGGGCAAATTTTGTACAGCCAAAACATCCTCAAGGAGATTGC
TGTGAACTGA
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