mRNA_Ecto-sp6_S_contig108.1120.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A6H5K946_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K946_9PHAE) HSP 1 Score: 769 bits (1986), Expect = 2.270e-270 Identity = 395/451 (87.58%), Postives = 409/451 (90.69%), Query Frame = 1
Query: 259 LRWEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTPLESGSLTSVAAVKLLPKPGKGXXXXXXXRQGDGDQKNPPTVRQDSAVDGDRVLQSEEEAEGVEEWETAGLEEVGGMAWFEGGVVLEAGVEGGEIADGSRMAVGGGGGSRGGSEESGVXXXXXXXXXXXAAGGEGLRVKPSQAYSHFGSQVVLLRRKKCLECFREETAATASTLKRFMSSMSVPVPLGDDRRNGRPCQHNPSRGTTYYDPKGEDGCLFDSPWLRLSHPNYTHRMNHYENEIADRLQHHLLHSGTPSSGSSSSPAVI 1611
L+WEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAV+EDLEAFLEPGAEVKL GHSLGGAAAVIVAAKL LRGHN+VKVMTFGAPMVTDAAGAA+LRDLLPV+RVTHERDPVPLTPLESGSL+SVAAVKLLPKPGKG RQGDGDQKNP TV QDS D DRVLQ++E +EEWETAGLEE GGMAWFEGGVV+EAGVEGGEI DGSRM GGGS GGSEE+GV A G EGLRVKPSQAYSHFGS VVLLRRKKCLECFREETAATASTL+RFM SMSVPVPLGDDRR GRPCQHNPSRGTTYYDPKGEDGCLFDSPWLRLSHPNYTHRM HYENE+ADRLQHHLLHSGTPSSGSSSSPA+I
Sbjct: 3 LQWEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVVEDLEAFLEPGAEVKLTGHSLGGAAAVIVAAKLMLRGHNVVKVMTFGAPMVTDAAGAAILRDLLPVVRVTHERDPVPLTPLESGSLSSVAAVKLLPKPGKGGGGG---RQGDGDQKNPATVLQDSKADEDRVLQNQE----LEEWETAGLEEAGGMAWFEGGVVVEAGVEGGEIVDGSRMVAEEGGGSSGGSEETGVGTED-------APGDEGLRVKPSQAYSHFGSHVVLLRRKKCLECFREETAATASTLERFMYSMSVPVPLGDDRRKGRPCQHNPSRGTTYYDPKGEDGCLFDSPWLRLSHPNYTHRMIHYENEVADRLQHHLLHSGTPSSGSSSSPAII 439
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A6H5KDE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE3_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.120e-33 Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 1 MRSRIGLAPSQLRLCCRRLARPSPRRGAEAAA-ASSATVSARHSSTAGPRARKKGGMALGAVASVAAVAALLREAQLPDRFAEWDDEL 261
MRSR+GL SQLRLCCRRLARPSPRRGA AA AS ATVSARHSSTA PRARKKGGMALGAVASVAAVAALLREAQLPDRFAEWDDE+
Sbjct: 1 MRSRVGLGRSQLRLCCRRLARPSPRRGAAAAXXASPATVSARHSSTARPRARKKGGMALGAVASVAAVAALLREAQLPDRFAEWDDEV 88
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A7S1QBS3_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QBS3_ALECA) HSP 1 Score: 115 bits (289), Expect = 5.610e-25 Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 439 RRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTPLES 825
RR H+ IRG+ + DL DL+ + +DEECGC H GF + A ++ED+ L+PG ++ L GHS+GGA AVIV KL RG ++ +V+TFGAP +G RD L V+RV H DP+P P+ S
Sbjct: 34 RREQHLFIRGSHLVEDLVTDLRIGKTWDEECGCYIHTGFLKKASVLLEDVAPLLDPGHDLVLVGHSMGGAMAVIVGMKLVARGFSVDRVVTFGAPKAVTRSGCDAWRDRLRVVRVVHHHDPIPTLPMLS 162
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A7S4UP58_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UP58_9DINO) HSP 1 Score: 107 bits (267), Expect = 6.170e-21 Identity = 77/228 (33.77%), Postives = 113/228 (49.56%), Query Frame = 1
Query: 262 RWEEVHQLAQLSNMTHK---DPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEEHR--------------RVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTPLE-----SGSLTSVAAVKLLPKPGKG 879
RW E+ LA+ S++ D + RW + GA+ R P + + + E R R+ + +RGT D ++ + +DEE GC H GF+ AD V+E LE L+ A++ L+GHSLGGA A IV +L+ RG+++ +V+TFGAP VTD AGA V+R+++ DPVPL P SG + + A LL P G
Sbjct: 68 RWVELRSLAERSSLMRGGRIDLAGIRRWHIERGFPGAITLREWPAGRDEKYSRFTGVSDRERRECYYLYYEITGRGERLQQIFLRGTCVPEDCVFNVLVAKDWDEELGCHLHHGFRRRADEVLESLEPLLDREAKITLSGHSLGGAVATIVGMRLQARGYDVQEVVTFGAPKVTDRAGARGHAFRGRVLRISNMLDPVPLLPFGFCTPWSGPFSQLGAQVLLLPPRTG 295
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A2D4S7D9_9GAMM (Lipase n=1 Tax=Bermanella sp. TaxID=2024825 RepID=A0A2D4S7D9_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 1.470e-17 Identity = 64/191 (33.51%), Postives = 93/191 (48.69%), Query Frame = 1
Query: 265 WEEVHQLAQLSNMTHKDPRLVARWFDCHQYTGALVDRHLPQVSNHYFVHVGHLPGEE-------HRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTP 816
+E + Q AQLSN+ YT + L + H +H L G E H V + +RGT +L + +DL+ DE G H GF A ++ ++ FL+P V+ GHSLGGAAAV++A L +G + ++TFG P VT+ GA L P++RV ++D VPL P
Sbjct: 22 FEVIEQSAQLSNLA---------------YTADDIQPPLSAMG-HNLIHQAVLDGVEVSYFLSLHEDVQFITVRGTANLQNAMVDLEINLKQDENLGIFVHQGFAHAAQGIMNNVTQFLDPSKPVRTTGHSLGGAAAVLLAMYLDKQGFELGDIITFGQPKVTNVGGAGAFSHL-PLLRVVTKKDIVPLVP 195
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A533ZFF0_9BACT (Lipase family protein n=2 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A533ZFF0_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 6.050e-16 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 1
Query: 430 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTP 816
++ ++V V +RGT +L ++ +D+ ++ D H GF + A V + ++ L+P E+++ GHSLGGA AVIV LK G + + MTFG P VT+ GA R LP++R H++DPVPL P
Sbjct: 92 DDTKKVQWVVVRGTSNLLNVKLDVDYNKIVDSRAHVPLHKGFADAALQVYQFVKPLLKPDYEIRVTGHSLGGATAVIVLMLLKEDGLTLGQAMTFGQPKVTNRDGARKYR-ALPLLRFVHDKDPVPLLP 219
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A7S0C4Y0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C4Y0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.080e-15 Identity = 52/124 (41.94%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 463 RGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVAD----AVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPV--MRVTHERDPVPLTP 816
RGT AD+ +L + +D E GC HAGF+ AD AV+ L + + + +++ GHSLGGA A+I+AAKL+ RG+ +V+ T G P V D + VL LLPV R+ ++RD VP P
Sbjct: 104 RGTTLRADVLTNLNMKYKYDPELGCRLHAGFRNYADRLLHAVLPLLVSTTDKRSTIEVCGHSLGGAVALIMAAKLRKRGYTVVRATTIGLPKVCDRSAVPVLTLLLPVDISRIENDRDVVPNVP 227
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A7S4LEG9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LEG9_9EUGL) HSP 1 Score: 90.1 bits (222), Expect = 3.460e-15 Identity = 67/196 (34.18%), Postives = 101/196 (51.53%), Query Frame = 1
Query: 271 EVHQLAQLSNMTHKDPRLVARWFDCHQ--YTGALVDRHLPQVSNHYFVHVGHLPGEEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEEC-GCMFHAGFKEVADAVIEDLEAFLEPGAE--------VKLAGHSLGGAAAVIVAAKLKLRGH---NIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTP 816
E+ + A+L+N+ K + + + G LV R +P++ Y + PG V V +RGT + +LG L+ Q D G FH GFK++ADAV EDL+ L E V GHS+GGA ++I+A K++ R + ++ KV+TF P VT A GA V D +P++ V +E D +P P
Sbjct: 86 ELVRFAELANLCGKTQEFLDNFVQDRRDWVRGPLVVREMPEIGQRYIILPTTNPGTHTAEVT-VIVRGTKTAQNLGTILQCWQTADPHLRGIPFHFGFKQMADAVYEDLQQQLRRLQEDEGMGPMKVNFTGHSMGGAVSLILAMKMRERANPEFDVGKVVTFAMPKVTTALGARVHSDAIPLLMVNNEMDIIPHLP 280
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A532EIJ5_9BACT (Lipase family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532EIJ5_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 3.680e-15 Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 430 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTP 816
++ R++ VA+RGT SL ++ +D+ +V D H GF + A V + L PG EV++ GHSLGGAAA IV K G + + MTFG P VT+ AG R L P++R +++DPVPL P
Sbjct: 130 DDARKIQWVAVRGTWSLENVKLDVDYNKVVDGRLKIPLHKGFADTALQVYAFAKPLLPPGYEVRVTGHSLGGAAASIVLMLFKEDGVKLGQAMTFGQPKVTNRAGVEKYRGL-PLLRFVNDKDPVPLLP 257
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Match: A0A1W9IZA4_9BACT (Lipase_3 domain-containing protein n=1 Tax=Nitrospira sp. ST-bin5 TaxID=1978765 RepID=A0A1W9IZA4_9BACT) HSP 1 Score: 87.0 bits (214), Expect = 5.340e-15 Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 430 EEHRRVHHVAIRGTVSLADLGIDLKTRQVFDEECGCMFHAGFKEVADAVIEDLEAFLEPGAEVKLAGHSLGGAAAVIVAAKLKLRGHNIVKVMTFGAPMVTDAAGAAVLRDLLPVMRVTHERDPVPLTP 816
+E +++H V +RGT +L ++ +D+ +V D H GF + A V + L G EV++ GHSLGGAAA IV K G + + MTFG P VT+ AG R L P++R +++DPVPL P
Sbjct: 78 DEAKKIHWVVVRGTSNLDNVKLDVDYNKVVDGRLQIPLHKGFADTALQVYAFAKPLLRTGYEVRVTGHSLGGAAAAIVVMLFKEDGVKLGQAMTFGQPKVTNRAGVDKYRGL-PLLRFVNDKDPVPLLP 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig108.1120.1 >prot_Ecto-sp6_S_contig108.1120.1 ID=prot_Ecto-sp6_S_contig108.1120.1|Name=mRNA_Ecto-sp6_S_contig108.1120.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=586bp MRSRIGLAPSQLRLCCRRLARPSPRRGAEAAAASSATVSARHSSTAGPRAback to top mRNA from alignment at Ecto-sp6_S_contig108:48374..56938- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig108.1120.1 ID=mRNA_Ecto-sp6_S_contig108.1120.1|Name=mRNA_Ecto-sp6_S_contig108.1120.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8565bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:48374..56938- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig108:48374..56938- >mRNA_Ecto-sp6_S_contig108.1120.1 ID=mRNA_Ecto-sp6_S_contig108.1120.1|Name=mRNA_Ecto-sp6_S_contig108.1120.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1758bp|location=Sequence derived from alignment at Ecto-sp6_S_contig108:48374..56938- (Ectocarpus species6 EcLAC_371)back to top |