mRNA_Ecto-sp6_S_contig106.1053.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig106.1053.1
Unique NamemRNA_Ecto-sp6_S_contig106.1053.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: D7FZ69_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI)

HSP 1 Score: 609 bits (1571), Expect = 1.410e-217
Identity = 311/316 (98.42%), Postives = 313/316 (99.05%), Query Frame = 1
Query:    1 VPSMRVSGGLLATLVTVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELACDE 948
            VPSMRVSGGLLATLVTV SASSRLDVIDLPTGFSPEGITSG GWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTK AAFYTDSFQPHIYKVNL+RETGALV+GSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELACDE
Sbjct:   20 VPSMRVSGGLLATLVTVTSASSRLDVIDLPTGFSPEGITSGGGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTKGAAFYTDSFQPHIYKVNLDRETGALVDGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELACDE 335          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: D8LPY1_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 4.530e-159
Identity = 234/313 (74.76%), Postives = 261/313 (83.39%), Query Frame = 1
Query:   10 MRVSGGLLAT--LVTVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELAC 942
            MR  G LLA    +  + ASSRLDVIDLPTGF PEGIT+G GWTAFVGSL++GNIWKGDL+TG+GEV EL APGPA GL HDRRS YLFVAG   GT RVYDEDFALVADL   D  +S +NDV++TKTAAF+TDSFQP IYKVNL+RETGALV+G +  TLVL DN P +E A N+NGIE TDDGSAL++VN ESQQ++AVDPDTG AT+IDLGG++L  RGDGLVLRKNTLWV DN LEQI EVSL+ADLSCGS+A R LSNPLFD QTTAMRKGNSLYAVNAK  VA ED+ATTAYEIVRVDRD GEL C
Sbjct:    1 MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSDYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSFQPKIYKVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 313          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: A0A6H5L833_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L833_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 5.020e-133
Identity = 224/315 (71.11%), Postives = 234/315 (74.29%), Query Frame = 1
Query:   10 MRVSGGLLATLVTVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEV--SLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELACDE 948
            MRVSGGLLATLVTVAS SSRLD                  + +      +GN WK DLKTGEG VMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADL FGDVGTS+INDVVVTKTAAFYTDS  PHI KV                                      TD+ S LIVVNSESQQVYAVDPDTGDATV+DLGGDVLGPRGDGLVLRK+TL VSDNVLE+IYEV  SLSADLSCGSVATRTLSNPLFDRQTTAM KGNS+YAVNA LDVAEE I TTAYEIVRV RDGGELAC+E
Sbjct:    1 MRVSGGLLATLVTVASTSSRLDPF----------------YNSASVRAPEGNNWKDDLKTGEGGVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLAFGDVGTSMINDVVVTKTAAFYTDSIHPHINKV--------------------------------------TDNDSPLIVVNSESQQVYAVDPDTGDATVVDLGGDVLGPRGDGLVLRKDTL-VSDNVLEKIYEVQVSLSADLSCGSVATRTLSNPLFDRQTTAMPKGNSMYAVNANLDVAEEVITTTAYEIVRVHRDGGELACEE 260          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: D7G508_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 3.100e-83
Identity = 157/326 (48.16%), Postives = 213/326 (65.34%), Query Frame = 1
Query:   22 GGLLATLVTVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAA-GLSHDRRSGYLFVAGAFSGTGRVYD--EDFALVADLDFGDVGTSIINDVVVTKTA--AFYTDSFQPHIYKVNLERETGALVNGSSF--ETLVLGDNFPF------VEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGD-VLGPRGDGLVLRKNTLWVSDNVL-----EQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELAC 942
            G LL+  +  A  + RLD+IDLP GF PEG+T G G   +V +   G+IWKGDL+TG G V+     G  A G+  DRRS YL+V GAFSG+  +YD  +DF+LVA++  G VG S++NDV++   +  A+ T+S Q   Y++ L+ E G L NG +   E + L  +F F       ++A+N NGI +TDD S+LI+VN +S +++AVDPDTG AT+IDLGGD +LG  GDGLVLRKNTLWV  N L     + + EV LS DLSCG++ TR LSN  F+   TA+RKGNS++   +   V+ E+IATT Y++VRVDRD     C
Sbjct:    5 GSLLSLAIVPAVLAGRLDLIDLPVGFQPEGVTLGHGQEVYVSAFTGGSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDTTDDFSLVAEIQLGTVGASLVNDVIIHPRSEYAYITESSQLQFYRIALD-EYGRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLILG--GDGLVLRKNTLWVCQNRLFGTPDQGVVEVLLSEDLSCGTI-TRRLSNEFFNDPATALRKGNSMWTTISMWAVSGEEIATTQYQLVRVDRDSAVSEC 326          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: D7FN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN98_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 8.260e-81
Identity = 160/313 (51.12%), Postives = 180/313 (57.51%), Query Frame = 1
Query:   10 MRVSGGLLATLVTV-ASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVG-TSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELAC 942
            MR  G +LA+ V + ASASS+LDVIDLP GF PEGIT+G GWTAFVGSL                                              T RVYDEDF +VADL   D G +S +NDV++TKTAAF+TDSFQP IYKV+L+ ETG LV+ S+ ETLVL DN P VE A N+NGIEV                                             LRKNTLWV      +I EVSLSADLSCGSVA R LS+P+FD QTTAMRKGNSLYAVNAK  VAEED+ T AYEIVRVDRD GELAC
Sbjct:    1 MRSFGVVLASSVMIIASASSKLDVIDLPRGFFPEGITNGEGWTAFVGSLKR--------------------------------------------TARVYDEDFTMVADLALADGGNSSFVNDVIITKTAAFFTDSFQPKIYKVDLDEETGELVDRSAVETLVLSDNVPVVEGAFNVNGIEV---------------------------------------------LRKNTLWVVHPSGGEILEVSLSADLSCGSVARRALSHPMFDTQTTAMRKGNSLYAVNAKFGVAEEDVDTAAYEIVRVDRDSGELAC 224          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: A0A2D0NC79_9BACT (Superoxide dismutase n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0NC79_9BACT)

HSP 1 Score: 227 bits (578), Expect = 1.890e-67
Identity = 140/295 (47.46%), Postives = 178/295 (60.34%), Query Frame = 1
Query:   46 TVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMEL-DAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFAL-VADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYE--IVRVD 918
            T+ +  S  D+I LP GF PEGI +G G   +VGSL DG+I++GD +TG GEV    D    A G+S D R+ YLFVAG   GTG + D      V   DFG    + +NDV+VTK AA++TDSF P+IYKV L   TG+  + +  E + LG +F FV    N NGIE   DG+ALIVVN  +  +Y VDP+TGDAT+IDL GD +   GDG++L   TL+V  N L QI EV LS D   GSV    L++  F   TT  R G +LYAVNA+ DVA    +    E  +VRVD
Sbjct:   36 TLENRQSYPDLIPLPDGFKPEGIVAGTGSDFYVGSLADGSIYRGDFRTGSGEVFYTPDGANTAVGMSFDSRTKYLFVAGGGFGTGYIVDTRTGTEVVSYDFGG---AFVNDVIVTKDAAYFTDSFTPYIYKVPLG-PTGSPADAADVEAIELGGDFEFVPGNFNANGIEAIPDGTALIVVNGGTGDLYLVDPETGDATLIDLNGDSVN-NGDGILLVGKTLYVVQNFLNQIAEVKLSTDYLTGSVED-ILTDDDFRIPTTVTRHGGTLYAVNARFDVAPPQSSAEGIEFNVVRVD 324          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: A0A3N5S5I5_9CHLR (Superoxide dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5S5I5_9CHLR)

HSP 1 Score: 225 bits (574), Expect = 5.690e-67
Identity = 140/298 (46.98%), Postives = 185/298 (62.08%), Query Frame = 1
Query:   37 TLVTVASASSRL-DVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAA-GLSHDRRSGYLFVAGAFSGTGRVYD-EDFALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDR 921
            TL+  A A     +VI LP GF PEGI SGRG T +VGS+  G +++GD+++GEGEV+     G +A GL +D RSG LFV+G  +G   VYD +  A VA++       S INDVV+TK AA++T+SFQP  Y+V+L R  G L    + E + LG +F F+ +A N NGI  T +G ALI+VNS    +Y VDP TGDA  IDLGG  + P GDGL+L+  TL+V  N L QI  + L +D + GS+   T+++ LF   TT  R GNSLYAVNA+          T YE+VRV R
Sbjct:   23 TLIGAAPAHQAFPEVIPLPNGFQPEGIASGRGNTFYVGSIPTGAVYRGDVRSGEGEVLVPAQEGRSAIGLKYDSRSGLLFVSGGNTGFAYVYDGKTGANVAEIQLSTT-PSFINDVVITKDAAYFTNSFQPVFYRVSLARH-GGLPPAPTSEEVPLGGDFQFIPDAFNSNGIAATPNGKALIIVNSSEGALYKVDPATGDAKRIDLGGGSV-PNGDGLLLQGKTLYVVQNQLNQIAVIRLKSDFTSGSIVN-TITSELFRVPTTIARFGNSLYAVNARF--GTPPTPDTEYEVVRVPR 314          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: A0A643JWK0_9EURY (Superoxide dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY)

HSP 1 Score: 223 bits (569), Expect = 3.350e-66
Identity = 138/293 (47.10%), Postives = 179/293 (61.09%), Query Frame = 1
Query:   46 TVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDF-ALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDR 921
            T A+ S+   VI LP GF PEGI +G G   FVGSL  G I++GDL+TG G+V      GPA GLSHD RS YLFVAG  +G   VYD D  ALVAD +  D  +  +NDVVVT+TAA++TDS +P +Y++ L    G + N S+ E + L  +F  V    N NGI+   +G  LIVVN+ +  +Y VDP +GDAT IDLGG+ +   GDG++L   TL+V  N L QI  V+L  D + G V    ++NPLFD  TT    GNSLYAVNA+        A   Y++VRV +
Sbjct:   34 TAAAKSAFPAVIPLPIGFQPEGIVTGLGTDFFVGSLAGGAIYRGDLRTGSGDVFVPPTGGPAVGLSHDARSNYLFVAGGPTGRASVYDADTGALVADYELQD--SQFVNDVVVTRTAAYFTDSARPSLYRIPLGAG-GDVPNQSAVEEIPLSGDFTSVA-GFNANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETV-TAGDGILLAGRTLYVVRNQLNQIAVVTLDPDATAGEVVD-VITNPLFDVPTTVTGFGNSLYAVNARFGTPP---ANAEYDVVRVSK 317          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: A0A2E0ZGA0_9CHLR (Superoxide dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR)

HSP 1 Score: 212 bits (539), Expect = 6.620e-62
Identity = 139/307 (45.28%), Postives = 186/307 (60.59%), Query Frame = 1
Query:   16 VSGGLLATLVTVASASSRL-----DVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPG-PAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFA-LVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRV 915
            V G +L TL+T+A AS        +VI LP GF PEGI  G G TA+ GSL DG+I+  DL TG GE++ L+ PG PA GL  DRR+GYLFV+G  +G GR+Y+     LV   DF       +NDV+VT  AA++TDSF P +YKV+L+ ++G      +  TL L  +F FV    N NGI  T +G+ALI+V+S   ++Y VDP TG+AT+IDLGG+ +   GDGLVL    L+V  N L QI E  LS + +  S+  + +++  FD  TTA  +G  LYAVNA+            Y+IVRV
Sbjct:    8 VVGLILLTLLTLAVASPAAAQRYPEVIPLPNGFQPEGIVVGEGNTAYAGSLADGDIYTVDLSTGAGEIL-LEGPGTPAVGLDFDRRTGYLFVSGGPNGDGRIYNTHTGDLVTSYDFAG---GFVNDVIVTPHAAYFTDSFMPVLYKVDLD-DSGT---PGADSTLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENVN-SGDGLVLVARKLFVVQNSLNQIAEFHLSRNYTAASLR-QIITDDDFDIPTTADNQGARLYAVNARFGTTPGP--DVEYDIVRV 302          
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Match: A0A3N5UU31_9CHLR (Superoxide dismutase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UU31_9CHLR)

HSP 1 Score: 211 bits (537), Expect = 1.350e-61
Identity = 124/265 (46.79%), Postives = 172/265 (64.91%), Query Frame = 1
Query:   73 DVIDLPTGFSPEGITSGRGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAA-GLSHDRRSGYLFVAGAFSGTGRVYD-EDFALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGALVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAK 861
            +VI LP GF PEGI SG+G T +VGS+  G +++GDL++GEGEV+     G +A GL +D RSG LFV+G  +G    YD +  A VA++    +  S INDVV+TK AA++T+SFQP +++V L ++ G L    + E + LG ++ F   A N NGI  T +G  LI+VNS    +Y VDP TG+AT IDLGG  + P GDGL+L+  TL+V  N L +I  + L +D S G++   T+++PLF   TT  R GNSLYAVNA+
Sbjct:   36 EVIPLPNGFQPEGIASGKGTTFYVGSIPTGAVFRGDLRSGEGEVLVPAQAGRSAIGLKYDERSGLLFVSGGNTGYAYFYDGKTGANVAEIQLSTL-PSFINDVVITKEAAYFTNSFQPVLHRVPLAKK-GGLPPAPTSEEIPLGGDYQFTPGAFNANGIAATPNGKTLIIVNSTEGALYKVDPGTGNATRIDLGGGSV-PNGDGLLLQGKTLYVVQNQLNRIAVIRLKSDFSAGTIVN-TITSPLFRVPTTIARFGNSLYAVNAR 296          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ69_ECTSI1.410e-21798.42Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D8LPY1_ECTSI4.530e-15974.76Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L833_9PHAE5.020e-13371.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G508_ECTSI3.100e-8348.16Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D7FN98_ECTSI8.260e-8151.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D0NC79_9BACT1.890e-6747.46Superoxide dismutase n=1 Tax=Flavilitoribacter nig... [more]
A0A3N5S5I5_9CHLR5.690e-6746.98Superoxide dismutase n=1 Tax=Chloroflexi bacterium... [more]
A0A643JWK0_9EURY3.350e-6647.10Superoxide dismutase n=2 Tax=Haloferax TaxID=2251 ... [more]
A0A2E0ZGA0_9CHLR6.620e-6245.28Superoxide dismutase n=1 Tax=Anaerolineaceae bacte... [more]
A0A3N5UU31_9CHLR1.350e-6146.79Superoxide dismutase (Fragment) n=1 Tax=Chloroflex... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:329108..334562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score604.0
Seed ortholog evalue4e-170
Seed eggNOG ortholog2880.D7FZ69
Model size1318
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG OGs2D5U8@1,2SZPX@2759
Ec32 ortholog descriptionSix-bladed beta-propeller, TolB-like
Ec32 orthologEc-02_002300.1
Cds size942
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1053.1prot_Ecto-sp6_S_contig106.1053.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig106 329475..334553 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348756.9973917-UTR-Ecto-sp6_S_contig106:329107..3294741682348756.9973917-UTR-Ecto-sp6_S_contig106:329107..329474Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig106 329108..329474 -
1682348757.0747092-UTR-Ecto-sp6_S_contig106:334553..3345621682348757.0747092-UTR-Ecto-sp6_S_contig106:334553..334562Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig106 334554..334562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348757.008574-CDS-Ecto-sp6_S_contig106:329474..3296871682348757.008574-CDS-Ecto-sp6_S_contig106:329474..329687Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 329475..329687 -
1682348757.0179029-CDS-Ecto-sp6_S_contig106:330643..3307001682348757.0179029-CDS-Ecto-sp6_S_contig106:330643..330700Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 330644..330700 -
1682348757.0271995-CDS-Ecto-sp6_S_contig106:330900..3310351682348757.0271995-CDS-Ecto-sp6_S_contig106:330900..331035Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 330901..331035 -
1682348757.03634-CDS-Ecto-sp6_S_contig106:331890..3320041682348757.03634-CDS-Ecto-sp6_S_contig106:331890..332004Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 331891..332004 -
1682348757.046061-CDS-Ecto-sp6_S_contig106:332901..3330441682348757.046061-CDS-Ecto-sp6_S_contig106:332901..333044Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 332902..333044 -
1682348757.0555975-CDS-Ecto-sp6_S_contig106:333873..3340051682348757.0555975-CDS-Ecto-sp6_S_contig106:333873..334005Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 333874..334005 -
1682348757.0649512-CDS-Ecto-sp6_S_contig106:334405..3345531682348757.0649512-CDS-Ecto-sp6_S_contig106:334405..334553Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 334406..334553 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig106.1053.1

>prot_Ecto-sp6_S_contig106.1053.1 ID=prot_Ecto-sp6_S_contig106.1053.1|Name=mRNA_Ecto-sp6_S_contig106.1053.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=314bp
MRVSGGLLATLVTVASASSRLDVIDLPTGFSPEGITSGRGWTAFVGSLVD
GNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYD
EDFALVADLDFGDVGTSIINDVVVTKTAAFYTDSFQPHIYKVNLERETGA
LVNGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAV
DPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADL
SCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIV
RVDRDGGELACDE*
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mRNA from alignment at Ecto-sp6_S_contig106:329108..334562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig106.1053.1 ID=mRNA_Ecto-sp6_S_contig106.1053.1|Name=mRNA_Ecto-sp6_S_contig106.1053.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5455bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:329108..334562- (Ectocarpus species6 EcLAC_371)
GTACCAAGCATGCGGGTGTCTGGAGGGCTGCTGGCGACATTGGTGACCGT CGCGAGTGCCTCGTCGAGGCTGGACGTGATCGATTTGCCGACGGGATTCT CTCCGGAAGGCATCACCAGCGGCAGAGGATGGACTGCCTTCGTGGGCTCC TTGGTTGGTGAGTGTCGCGTTGTTGTTGTTGTACTTGCCGCACTTAATTC CTTTCCGATCGGCTTCTTCTCTTGTTCGACCACATGCCGTCTAGAAACCG CAAAATCGAACGAAGGTAGTCTACACCCGGGAATAATGCGGCCATGGAGT TTTTCCGATTCGCCGTGGAGTTCCAGTCGCCCAATTCTCTGTTCAGTCGA GAACGACAGGTGGACATTTTCACACATCCGCCGAACGAATGATTGATTTT CGTTCGCTTGGTCTTGTCCGCCATTGTAGTTAAATTGGACTCGGACGGGC CAATTTTTCCCGAAGATCTCTTGTGCCCTCAAACTTCCATCACGCATGTA TGCAGACTTGAGAAAAAACGTAACCTTTTCATAACGGCGCTTCCGTTCAT GCTCCAGATGGAAACATCTGGAAGGGCGACCTCAAGACTGGCGAGGGCGA AGTGATGGAGCTTGATGCCCCGGGCCCCGCCGCAGGCCTGAGTCACGACC GCCGATCCGGCTACCTCTTCGTCGCTGGGGCATTCAGCGGTGCACACCAA CACACCTGACTTGCACGAGTCACAGGTGGATTAGATCTGGTAGTCGAACG GTTTGTTTTTCGGTTGATCGATTGACGATGATCGGTGATCTGCGTCTTGT TGGGCCTTATTCATGGACTCATGGGTCCATGGCATCTGTACTTTTCAAAC GATGAAAGCACCTTATAGCGAGGGTTCAGAGAACGAAGTTCTTCGCGGCA TTCCTCCTACGCGTGAGCCTTAAGGTGTAGACACGGATGTTCAAATCAAG TGAGGCGATTCACGCAGCATACACGCACACACGCACACACAGGCGTGAAT CGATACGATACGATCAGCAGTACGTGGGATTGATGCAGCCGTTCGATTTT TGTTGTTGACGCGACGGCACGAAAAACAGGAAGGAATCCAGTTGTGAAAC TCAGAAAGGCGGCTTGGCATCACTTCTTTGCCTGTAGCCTGTTTGTGCTT TGTTTTGTCATGTCCTCATCGGGTTGAGGCGTTCGCAGACACTATACTGC TAGGCGATTACATCTCTAGCTTCTTGGGCTGATTCGGTCGCTGTTTCTTG ACAGCCCGGAAACTAAACGTTCGAACGGCATAGCCTGTGTAGGAACACGG GATTCTTTGAAACAAGCTCAAGTTACACGGAAATCGTAAGAGTTGCACGA ACGTTCACGTTCTCTACAGCCCACCCCACTGGTTCCGATATCGAATGCCC ACCGAAGGTGAGCAGAATGTTCCAATCTACAATATTTCGAAAATACTTCA CCTCACACGTCTTTCCCTTATCGCTCTTCCGAATCTCGTGGTCCTGCCAC GGCTAACTTGCATATCAGGCACGGGACGCGTGTACGATGAGGACTTCGCT TTGGTTGCCGATCTGGACTTTGGTGACGTGGGCACGTCGATCATAAACGA CGTTGTCGTCACGAAGACCGCCGCGTTCTACACGGACTCGTTTCAACCGC ACATCTACAAGGTGCGAGAGCTGGCTCTGCGAATGATTCTTCGTCCGAGA CAATCCAGAGATTCACGAGCGGTCACCGGCAGTTGTGTCGCTAACGTCTG GTGTTCCTACTATTCGAGCGCGTAGAAAACCCATCGTTCCCACTGTACGA GGAGTAAATCTCAACAGGAAACCTTCTGATGATGTGATGTGGGCTGTGTT GTGAGTAGTTCATAACAAACACAGCTTGTGTTTCATTTTCGGTTATTGTG GTAGAGTATTGGGTTGCAAGCACATCGTTCACGATTCCGCCATGTCCTTC GTGAGCGTGGGTTTAGAGGTAGGCCCCGGTTGTTCTCCGACTTCCCCATC TGCTTATGGTGCTGGCCGCCACCAAGCAACGTAGGGGTGTCTGCATCACC TGCTCACATCATGGTGGTCTAAGTTGTTCCGCGACTCTTCGATCGGTCAA GACCGACCCCGTACGTTCCTGGGCGTAAGGGTTGCCCCAAACCATAAATC CCTGGCGATGATGGTGACCGCACCCCAGTCTTTTGAAGCCCTCCTGATGG TTCAAAATTGTTTCATTTCCTTCCACAAGTTATCTTTCGACGTGGTTTGC GACTCAGAGCACGCTGGGGCTCCATCCATCCTATTGTCTGCTTTGCCTGT TTTCTGCATTGGTTTCATCATCTTGTCTCGCCTCTCGTCTTTTCATGGGA ATTGCGTGGGGACGTTCACGTTTATTTTTACGGCTCGGTCCCTGTTCCTG CTAGAGTTGCCTGTTTCCTGCTTCATGTGCCTTCTTGGGGCCAGGTGACC GCGCGGTTTGTCTACAACTGATGCGGCCAGCGGCGGTCTCTCATGGTACT TCAGTAGGGCCGCTACATGTAAAAGACAACCGAATGAATTACCGGTTCGT TCACACAGGTGAACCTCGAAAGGGAGACCGGCGCGTTGGTGAATGGGTCA TCCTTTGAGACTCTCGTCCTTGGCGACAACTTTCCCTTCGTGGAAGAAGC AATCAATCTAAACGGCATCGAGGTGAGCAAGACGTTTGAGTGATCTTGCG CTACACATCCGATCCGGCACGATATTTTCCGATCTCACGTGTAGTTGACG CGCGACACAATCTACGCATGCGAAGGTTTGGTCTCTTCACGCTTTGGCAC TGCCTTACCCCGCCAAACCACGAGCAAAAATCACGTACACCGTGGTTTCT TCGAGATTCATTGTCATTCTTTCGCCCAGCCACAGGGCAAATTAATTGCA GGTGTACCGCGGAGAGAAGCACGCATGCTCGATGATCATCTTCTAAGGGT CGCCTCATCATCACCCTCGAAACCTTGCACTGCTACCGACTTATGCGTGC ATCGTTGCCGATGGATTTAGGAAGGAAAACACGGGAGACGTGCGGGCACA GCAGTAGCTACATAGTACGATAGCTCCCCGTTTCTAAGGGAATCCGACTA CTGTAATATGGTCGTGCTTAGAGCTATTATTTTGGTGGAAGGTCTGGGTA CATTGGGAATCCTAACAAATATGTAGCGATGTGCCCCATGACGAGAATCA TTTCCAAAATACGGTGTCTACGACCGGCACGCGAAATTCATTAACAGAGA GGGAGGTTTTATGTAAGAGAAGCAACCCACTATAGGCGTTTCTAGCGCTG ACGGGGGTGGGGACAAGGGCCTCTTTTCCGCCACGCCTCCTCGAAGTGTG CGACATGACACGGGCAGTTACACCGACAATTCGTGTGATCCCAACCATCC AATAATAAACAATAGCAGGGTACGCCATCCTTGTCAAGATGCCATATTCC GGCGGGGGCACACAAGAATCTGATTATGGAATGTCCTTCAAGCCTTTCCC GTTCTTTCGTGCACAACTGTGTCTCAGGTCACAGACGACGGCAGTGCTCT GATCGTTGTCAACAGTGAATCCCAGCAGGTTTACGCCGTTGACCCGGACA CCGGCGACGCAACTGTGATCGACCTCGGCGGCGACGTCCTTGGGCCGCGC GGCGATGGGTTGGTACGGGGATAATATTTTTTTGGCTTTTGATATGTCTG GATAATGTGGCCATGAGAGCAAATCATGCTGAACGTCCAAGCAGGCGCCC ACCGCATGTGCCATAGGTTAACGCGGTGAGCCCCACGGAAGTTGTTTGGG TTGGTGCTCTGTCTCGCTTCGCCCAGTTGATGCACCTGCTTGCTCGCGAC TGAATGATTAAGGTGCTGCGCAAGAACACACTCTGGGTCTCCGACAACGT TCTCGAGCAGATATATGAGGTGAGCTTTCGAGATGCCGAGATATTTGCGT AGTACTTCCACGTGGGGTTTGATGGCAACACTCAAGTATTCGTGGTGTCG CGTAGACGCATCTAGACTCCAGACATAAGTTGACTAAAATCCTTGACCCT AATCGCGAGAGGGCGATTTCGTACCGCGAACAATACACTTCACACAACAG AGGCTTCTTTCTACGAATCATTCCGCCAAGCTCGTTTCGCACTTGGAGAT GATTTGACCAACTCCCGCCCTTGGACGACCTTGACAGTATAACCCGGCGT TGTCCGCAACTTTTCGAAACTCAATGGCTTGCATTCAATCCCCTCTCGGT CATGAGATTGCTACTGTTGTTGTTGTTGTTGTTGTTGTTATATTGCACGG AAGTGCCGGTTGGAGCACCGAAGTGCCGGTTGGAATATCTTCGTTTCGCC CTAGTTCCCTCAGATGTTGTTGCTCGTTCGTGTTGGCGTCGAAGCGTCTA ACGCACGGGAGCAGGTGACGTGGAAAAAGGGCAGAAACAAATATCGATGT TACAGGCTAGTTGAGGGTGTGAGTGTGATCGTTGAAGGGGCATGACAGTT GAACTCATGGAAGGTAGAGTTATTTTCATGTAGCTCCTCTAAATATCTTC TGCGGCTGACGGTCAAGGAGCATTACCTAGGCATACCCGCGACGATTCCA GATGCCTTCGTCAATCAAGATGCAGGTTTGGGTGACATTTCCCACAAACC CAATTCAGACAAAGGATCTTCAATCCGTGTGGATGTATCTTGTAGTGGCA GATTTTCTTCGGAATATCCAACCGAGAATGCCTCCCCCAACATTTCAATA AGGAAACACTACGCTAACTGTGTAAGCTCACCCGACCCATAAACCGATTC CCTCCCCTTCCCTCGTCGTTGCCTCGTCGTTGCCTCGTTGTTGGTTCCCC GTGGGGGGGGGGCGTGTCTAAACAGGTGTCTCTTTCGGCTGACCTGTCTT GCGGGTCGGTGGCGACCCGCACGCTATCGAACCCCCTCTTCGACCGTCAG ACCACGGCCATGCGCAAGGGAAACTCTCTGTATGCCGTGAACGCCAAGCT CGACGTGGCCGAAGAGGACATAGCCACCACAGCGTACGAGATTGTCCGTG TCGACCGAGATGGCGGAGAGCTGGCGTGCGACGAATGATTGATGGTGTTT CACCTTCCTTTGAGCCTCGAACAAGAAATGGTGGTCTATGTGTTTTTGTG TTGAATTCTCAGCAAAGCTTCAGGTGAAGATAGGTGGGAAGCATTGTATT GCCGTTGTCCCTAACGTGCTTACCCGAGATGTGTGTGTCAATATTTCGGT GAAGCGGATGTAGCTCTACAATAAAGTCGACGACGAAATATTCACGAAGG GACCAATGGACCAAAAAAATAGCATCGATGGCTGGATAGCCAAGAAGTTG TACACCTCTTCAGCACTTTTGGCAACGAAACCATCCATGTGTTGCCTTGC CCGTCATTTTTGCCTTCAAGCAATCTGGGGTCTTTCCATGTTCCACAGCG AATGT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig106:329108..334562-

>mRNA_Ecto-sp6_S_contig106.1053.1 ID=mRNA_Ecto-sp6_S_contig106.1053.1|Name=mRNA_Ecto-sp6_S_contig106.1053.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=942bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:329108..334562- (Ectocarpus species6 EcLAC_371)
ATGCGGGTGTCTGGAGGGCTGCTGGCGACATTGGTGACCGTCGCGAGTGC
CTCGTCGAGGCTGGACGTGATCGATTTGCCGACGGGATTCTCTCCGGAAG
GCATCACCAGCGGCAGAGGATGGACTGCCTTCGTGGGCTCCTTGGTTGAT
GGAAACATCTGGAAGGGCGACCTCAAGACTGGCGAGGGCGAAGTGATGGA
GCTTGATGCCCCGGGCCCCGCCGCAGGCCTGAGTCACGACCGCCGATCCG
GCTACCTCTTCGTCGCTGGGGCATTCAGCGGCACGGGACGCGTGTACGAT
GAGGACTTCGCTTTGGTTGCCGATCTGGACTTTGGTGACGTGGGCACGTC
GATCATAAACGACGTTGTCGTCACGAAGACCGCCGCGTTCTACACGGACT
CGTTTCAACCGCACATCTACAAGGTGAACCTCGAAAGGGAGACCGGCGCG
TTGGTGAATGGGTCATCCTTTGAGACTCTCGTCCTTGGCGACAACTTTCC
CTTCGTGGAAGAAGCAATCAATCTAAACGGCATCGAGGTCACAGACGACG
GCAGTGCTCTGATCGTTGTCAACAGTGAATCCCAGCAGGTTTACGCCGTT
GACCCGGACACCGGCGACGCAACTGTGATCGACCTCGGCGGCGACGTCCT
TGGGCCGCGCGGCGATGGGTTGGTGCTGCGCAAGAACACACTCTGGGTCT
CCGACAACGTTCTCGAGCAGATATATGAGGTGTCTCTTTCGGCTGACCTG
TCTTGCGGGTCGGTGGCGACCCGCACGCTATCGAACCCCCTCTTCGACCG
TCAGACCACGGCCATGCGCAAGGGAAACTCTCTGTATGCCGTGAACGCCA
AGCTCGACGTGGCCGAAGAGGACATAGCCACCACAGCGTACGAGATTGTC
CGTGTCGACCGAGATGGCGGAGAGCTGGCGTGCGACGAATGA
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