mRNA_Ecto-sp6_S_contig106.1050.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig106.1050.1
Unique NamemRNA_Ecto-sp6_S_contig106.1050.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 1239 bits (3205), Expect = 0.000e+0
Identity = 623/661 (94.25%), Postives = 631/661 (95.46%), Query Frame = 1
Query:    1 MATCGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDKKVKKEWEAQN 1983
            MAT GEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSF+GKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQE+S+           QIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPEL LMSSLS+AKKEVKKCLCDDFDTPGAMGALQELVK +NKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAG          EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYF+GLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDK  K    ++N
Sbjct:    1 MATAGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSR----------QIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGGXXXXXXXXXEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDKARKNALLSRN 651          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 778 bits (2010), Expect = 8.150e-271
Identity = 410/664 (61.75%), Postives = 476/664 (71.69%), Query Frame = 1
Query:   46 MPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGAL-SLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGAL-QELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQRE----QEQLRRLEAKAETKRKAAEKEARKKIPASEYFQG--LKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNALA 2007
            MP W  P P G  GL   + + +PL+V NSLTRTK  F+PK+  RVLWYMCGPTVY  SHMGHARTYLHFDILRR+M D+F Y+V L MNITDIDDKII RAN+   N+R+LA+HFE DYM+DM  LGVR P  +TRVSEF+PEVV YI+ +I NGYAYESNGSVYF+VQ+F   KGH Y KLLPEG+GN ELMAEGEGAL S GAGDK+S  DFALWK+S+EGEP W SPWG GRPGWHIECSVMAS TFE  GDG MDIHSGGVDL+FPHHDNE+AQAEA Y+C QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQ ++            QIR+ FLLHKYN PMDYGD+ M+GALA ERTF EFFH VK+ +R  TA D  R  E E+AL   L E K  V+  LCDDFDTP A+  L  +LV+ +NKYI+ K  AG       VR A EYVT+IFKVFGL + G  +GF    + G+           SRE  +GPVLD LS FR +VR C RAGD+ GV++ACD VR++ LP +GVRLEDKGDQ VWKLEDPAVLA E+ ++E    Q QL + E K +   KAAEK A+ KIP  E F+     G D K  YT FD +GVPTH A G  + K+  K ++KEW  Q   Y   LA
Sbjct:    8 MPEWHGPPPFGVEGLAPELLQFFPLRVTNSLTRTKIPFIPKEGQRVLWYMCGPTVYDGSHMGHARTYLHFDILRRIMADYFNYNVVLVMNITDIDDKIILRANQRNLNFRDLASHFEADYMEDMKALGVRPPEHITRVSEFVPEVVAYIEQVIANGYAYESNGSVYFDVQAFHKHKGHHYGKLLPEGLGNAELMAEGEGALTSCGAGDKKSQSDFALWKKSKEGEPQWESPWGGGRPGWHIECSVMASKTFELYGDGCMDIHSGGVDLRFPHHDNEIAQAEAHYNCAQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTAR----------QIRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKVFGLVTSGVDMGFDVEQEGGI-----------SREEAMGPVLDALSTFRTQVRTCARAGDSAGVISACDQVRDDALPPLGVRLEDKGDQVVWKLEDPAVLAAEKAKKEADAQQRQLEKEEKKRQAAIKAAEKAAKDKIPPCEMFRSHVTDGPDAKPKYTAFDADGVPTHGADGAELTKNAIKGLRKEWTKQKTAYEKYLA 650          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 629 bits (1622), Expect = 5.520e-213
Identity = 326/627 (51.99%), Postives = 435/627 (69.38%), Query Frame = 1
Query:   94 EMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSR---EG--EPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQ----AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVK 1947
            E+++RMYPLKV+NSLTR+K RF+P+D +RVLWY CGPTVYA SHMGHAR+Y+  DI+RR+  DF GY++ LC NITDIDDKII R++E    +RELAA  E ++ +DM  LGV+ P ++TRVSE+IPEV+E+++ +I  GYAY SNGSVYFN  +FE   GH Y KL+PE +GN EL+AEGEGAL+    DK++  DF LWK+++   +G  EPSW SPWG+GRPGWHIECSVM+    E +G G +D+H+GGVDLKFPHH+NE+AQ+E   D  QW+NY+LHTGHL+IKGFKMSKSLKNFITI+QAL+E+S            QIR  FLLHKYN PMDYGD  M+ A+  E+ FSEFFHNVKA LRR     P    + ++ALM      K+ V+  LCDDFDTP A+G L++L++ +NKYIE+    G  +++   R    Y+T + + FGL      +GFS       GG++ G     ++E +L P LD L++FR+ VR     GDT  VLAA D +R+++LP +GVR+EDKG      +VWKL+DPA L  ER+Q+E  +  + E +AE +RK  E+E + K+P  + F+ +  +     ++ FDDNG+PTHD  G PI K
Sbjct:   10 EVLERMYPLKVYNSLTRSKVRFIPRDPSRVLWYQCGPTVYAESHMGHARSYVCLDIIRRIAQDFLGYNIVLCQNITDIDDKIIIRSSERNIPFRELAAVNEAEFFEDMNRLGVQLPDMITRVSEYIPEVIEFVEALIAKGYAYASNGSVYFNTGTFE-SGGHKYGKLVPEQIGNSELLAEGEGALTAND-DKQNPTDFVLWKKTKTHADGMFEPSWESPWGNGRPGWHIECSVMSKCAMEKLGGGHIDVHAGGVDLKFPHHENEIAQSEGCLDSHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSAR----------QIRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGV-VGSAVLSSTAR----YITSVLRTFGLVQDDNDIGFSL---ESSGGESAG-----NKEELLAPYLDALTKFRETVRIAAINGDTAAVLAAADCLRDDVLPPLGVRMEDKGSGVDVVSVWKLDDPATLRLEREQKEAVKRAKEEQRAEARRKQLEREEKAKVPPQDMFRSMIDQ-----FSAFDDNGMPTHDTQGVPISK 606          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA)

HSP 1 Score: 626 bits (1614), Expect = 1.690e-211
Identity = 346/637 (54.32%), Postives = 434/637 (68.13%), Query Frame = 1
Query:  118 LKVFNSLTRTKTRFVPKD-SNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLG-AGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGM-GDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPE-LALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKAL-YTQFDD-NGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNAL 2004
            L V NSLTR K  F+  D SN++ WYMCGPTVYA SH+GHARTYL FDI+RR++ D+FGY   L MNITDIDDKII R+NE   ++ EL+ H+E +Y +DM  LGV+ PTVVTRV+E++P++  YIQ I++ GYAYESNGSVYF+V +FE  +G  Y KL PE + N  L+AEGEG L+   A +K+S  DFALWK+S+EGEPSW SPWG GRPGWHIECSVMAS     + G  TMDIHSGGVDLKFPHHDNEMAQAEA+    QWVNYF+H GHLHI+G KMSKSLKNFITI+QAL+ NS            QIR+LFLLHKYN PMDYGD+ +S A+ AE++F+EFFHNVKAALR     +  +   P  + L  +L++ + +V   L DDFDTP AM  L +LVK  N Y+E +      +V   VR  A Y+TK+FKVFGL  P  ++GF         G +GGEG    +E IL PVLDVL  FR  VR   RAGDT+ +L  CD  R+ELLP +GVRLEDKG+ +VWKL++PA L RE +Q+  EQ R+             KEA K++P +E+ + L  ED   L Y++FDD  G+PTHD  GE + K+  KK +K ++ Q   Y   L
Sbjct:   30 LSVMNSLTRQKDHFITSDGSNKLTWYMCGPTVYAESHLGHARTYLGFDIIRRILEDYFGYQCELIMNITDIDDKIIERSNERNMHHLELSKHYEMEYHKDMQALGVQPPTVVTRVTEYMPDITAYIQTIVERGYAYESNGSVYFHVTAFEQAEGMHYCKLAPEQIHNASLLAEGEGKLTQSHATEKKSPRDFALWKKSKEGEPSWESPWGPGRPGWHIECSVMASDVLRKLTGHPTMDIHSGGVDLKFPHHDNEMAQAEAECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSAR----------QIRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETETTQ---VVGLVVRSVASYITKMFKVFGLI-PNDSIGFGL-----EDGSSGGEG----KEEILSPVLDVLMAFRSSVREQARAGDTQAILKLCDKFRDELLPPLGVRLEDKGEVSVWKLDNPADLVREMEQKRFEQERKAXXXXXXXXXXXXKEALKRLPPTEFLKQLTLEDNITLAYSKFDDATGLPTHDNQGEELNKNQMKKAQKLFKTQQGKYEKWL 643          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A5D6YDM0_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDM0_9STRA)

HSP 1 Score: 624 bits (1609), Expect = 4.370e-210
Identity = 346/709 (48.80%), Postives = 448/709 (63.19%), Query Frame = 1
Query:   49 PTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG------------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSL----GAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDT----------KGVLAACDHVREELLPGVGVRLEDKG-DQAVWKLEDPAVLARERQQREQEQLRRLEAKA----ETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNAL 2004
            PTW PP P+    LTE  ++ YPL+V+NS+TR+KT FVP    RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FG++V L MNITDIDDKII RA E G                                    +  + L++ +E+ ++ DMA LG++ P V+TRVSE++PE+VEY++ II NGYAYESNGSVYF+  +F   KG AY KLLPE VG  EL+AEGEG+LS     G  DKRS+ DFALWK S+ GEPSW SPWG GRPGWHIECS MAS   +    G +D+HSGG+DL+FPHHDNE+AQAEA +D  QWVNYFLHTGHLHI+G KMSKSLKNF+ I++AL++NS+           Q+R LFLLHKYN PMDY D++M  A+  +R FSEFF NVKAALR   A    +    E  L ++L EAK+ V + L DD +TP A+  LQ+L K +N+Y+ +   AGE +V+  +R AAEY+T I +VFGL      +GF    D G  G        A +EA+L PVLD+ ++FRD++R   RAG +          + +LA CD VR+E LP  GVRLED+    AVWKL +   L  E Q++  E+ R+ E K     +  RK A  EAR +IP S+ F     +     Y+QFD++G+PTHDAAG P+ K   KK++KE      LY   L
Sbjct:   14 PTWYPPAPMKS--LTEYWEKHYPLRVYNSMTRSKTPFVPMHGRRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGFEVELVMNITDIDDKIIIRAAENGWLEAHAGQESELPADKDARTRTVMAWAATQPAEETMRRTKALSSFWEQSFLADMASLGIKMPAVITRVSEYVPEIVEYVERIIRNGYAYESNGSVYFDTVAFAQSKGKAYGKLLPENVGQSELLAEGEGSLSAAAATGKSDKRSASDFALWKTSKPGEPSWASPWGAGRPGWHIECSAMASDVLKHHAGGQIDVHSGGIDLRFPHHDNEIAQAEAYFDFPQWVNYFLHTGHLHIEGLKMSKSLKNFVKIQEALRDNSSR----------QLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFSEFFQNVKAALRALGADKTQKWTPREKKLSAALLEAKERVHQALADDLNTPAALLHLQQLAKEVNRYMAS---AGE-LVSMIIRSAAEYITHILRVFGLVPAASDIGFPLTADGGAAG--------ADQEAVLAPVLDIFAQFRDEIREAARAGGSGDXXXXGALARTILALCDQVRDEKLPLAGVRLEDRAAGSAVWKLANKDELIEELQKKADEKRRKDEQKRARLEDEARKRAALEARAQIPPSQLFTRETDK-----YSQFDESGIPTHDAAGAPVSKGLVKKLQKEQAKHKALYEKRL 693          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA)

HSP 1 Score: 622 bits (1605), Expect = 4.840e-210
Identity = 352/666 (52.85%), Postives = 433/666 (65.02%), Query Frame = 1
Query:   31 CKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKD-SNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAG-DKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMG--DGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKA--LYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNAL 2004
            C    MP W PP      G +   D    L+V NSLTR+K  F   D SN V WYMCGPTVY  SH+GHARTYL FDI+RR+M+ +FGYDV+L MNITDIDDKII RANE   ++ +L+   E  +++DM+LLGV  P V+TRVSE++PE+V+YI  I+  G+AY SNGSVYF+V +F   + H Y KL PE +GN EL+AEGEGAL+   G +KR+  DFALWKRS+EGEPSW SPWG GRPGWHIECSVMAS  F  MG   G MDIHSGG+DLKFPHHDNEMAQAEA+    QWVNYF+H+GHL IK  KMSKSLKNFITI+QALQ N+            QIR+LFLLHKYN PMDY DD M+ A   E++FS FF NVK ALR +T +   +  E E  L + +  A+  V+K L DDFDT  AM ALQ+LVK +NKY+E +  A + IV+  VR AA YVT++F+VFGL S G  +GF          + G   G  SRE +L PVLD + EFR   R   R GD KGVL  CD  R+ +LP +GVRLEDK + +VWKL DP  L RE +Q + E  R+           A K+A  K+P  EY + L  +DG     Y  F D+G+P    +GE + K+  KK  KE+ A  K Y   L
Sbjct:   10 CPVGIMPDWRPPSSSAADG-SPSFD--VGLQVMNSLTRSKVPFRTLDGSNNVKWYMCGPTVYDVSHLGHARTYLGFDIIRRIMSSYFGYDVTLVMNITDIDDKIILRANERDISFTDLSRENEAGFLEDMSLLGVDPPDVLTRVSEYVPEIVDYIGDIVKKGFAYASNGSVYFDVGAFRRAEDHVYCKLCPEAIGNAELLAEGEGALTQEFGSEKRAPNDFALWKRSKEGEPSWESPWGPGRPGWHIECSVMASQVFRQMGVKGGCMDIHSGGIDLKFPHHDNEMAQAEAQSGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTAR----------QIRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLETQGPA-KAIVSLVVRKAAVYVTEMFRVFGLISAGTDIGFPL--------EEGEGAGAVSREDVLAPVLDAVLEFRAGARDAARTGDAKGVLTKCDAFRDAVLPELGVRLEDKTEGSVWKLADPEELRREAEQAKAEMERKXXXXXXXXXXXARKDALNKLPPEEYMKQLTLDDGSGNKKYGTFGDDGLPLTVHSGEALNKNQVKKASKEFSAHKKRYEKYL 653          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A485LI47_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI47_9STRA)

HSP 1 Score: 607 bits (1565), Expect = 9.400e-204
Identity = 335/699 (47.93%), Postives = 439/699 (62.80%), Query Frame = 1
Query:   37 KAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDT-----KGVLAACDHVREELLPGVGVRLEDK-GDQAVWKLEDPAVLARERQQREQEQLRRLEAK----AETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYN 1995
            K   PTW  P+P+    L E  +R YPLK++NS+TRTKT FVP  + RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY V L MNITDIDDKII R  E G                                  +    L+ +FE+ +M DMA L ++ PTV+TRVSE++PE+VE++QGII NGYAYESNGSVYF+  +F   KG  Y KL+PE VG  EL+ EGEG+LS+GA DKR++ DFALWK+S++GEP W SPWG+GRPGWHIECS MAS   + +  G +DIH+GGVDL+FPHHDNE+AQ+EA ++  QW+NYF+HTGHL+I+G KMSKSLKNF+ I +AL+ N TP          Q+R LFLLHKYNTPMDY D+ M  A+  +  FS+FF NVKA LR T      +    E AL  S+ +AK++V + L DD DTP A+  LQEL K++N+Y+ A +      V+  VR AAEY+T + +VFGL      +GF   G AG            ++E  L PVLD+ ++FRD+VR      D      K ++  CD VR+  LP  GVRLED+ G ++VWKL D   L +E +Q+E E+  +  AK    AE  RK AE+  R +I  S+ F+        A Y  F++ G+PTH A GEP+ K   KK+ KE +   KLY+
Sbjct:    6 KKTQPTWYMPQPMNS--LMEYWERHYPLKLYNSMTRTKTTFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYQVELVMNITDIDDKIIVRGAENGWTEAHPGQSLPANKDEAAKVVLQWASEQTAESNMKRAENLSKYFEKTFMDDMAALNIKPPTVLTRVSEYMPEIVEFVQGIIANGYAYESNGSVYFDTIAFGAAKGMNYGKLVPENVGQSELLEEGEGSLSVGASDKRNASDFALWKKSKKGEPFWASPWGEGRPGWHIECSAMASDALKHLEGGRIDIHTGGVDLRFPHHDNEIAQSEAYFNFGQWINYFIHTGHLNIEGLKMSKSLKNFVKINEALKHN-TPR---------QLRFLFLLHKYNTPMDYNDNTMDEAVGVDAFFSKFFQNVKAVLRETGIERSQKWSAAEKALGKSVLDAKEKVHQALADDLDTPRALRLLQELAKDVNRYLAASDAP----VSMAVRAAAEYITHMLRVFGLVPHATDIGFPLDGAAG-----------GNQEETLAPVLDIFTDFRDEVRAILFNNDPNVDVKKALMTLCDSVRDTKLPHAGVRLEDRTGGKSVWKLADKDELLKEIRQKEDEKAAKEVAKQQRLAEEARKLAEERERAQIHPSDLFKS------SAEYGAFNEAGLPTHMANGEPVAKSLSKKLAKEQDKHQKLYD 671          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: H3H2X5_PHYRM (Cysteine--tRNA ligase n=24 Tax=Phytophthora TaxID=4783 RepID=H3H2X5_PHYRM)

HSP 1 Score: 607 bits (1565), Expect = 1.360e-203
Identity = 334/702 (47.58%), Postives = 437/702 (62.25%), Query Frame = 1
Query:   49 PTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAK-ERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKG---------VLAACDHVREELLPGVGVRLEDKG-DQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKA-------AEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVK--DKKVKKEWEAQNKLY 1992
            PTW PPRP+   GLTE  D  YPL+++NS+TRTK  FVP    RVLWYMCGPTVY  +H+GH RTY  FD +RR++ +FFG +V L MNITD+DDKII RA E G                                  +  REL+  +E+ ++ DMA L ++ PTV+TRVSE++PEVVE+++GII NG+AYESNGSVYF+  +F G KG AY KLLPE VG  EL+AEGEGALS G  DKR++ DFALWK+S+ GEP W SPWG+GRPGWHIECS MAS   + +  G +D+HSGG+DL+FPHHDNE+AQ+EA +D  QWVNYF+HTGHL+I+G KMSKSLKNF+ I++AL +NS            Q+R LFLLHKYN PMDY D++M  A+  +R F+EFF NVKA LR        +    E AL  +L + K++V + L DD +TP A+  LQ+L K +N+Y+    E+    ++  C    AEY+T+I  VFGL +    +GF    +A  G D         +E +L PVLD+ ++FRD++R   R+    G         +L  CD VR+E LP  GVRLED+    AVWKL +   L  E ++++QE+L+                   AEK    KI  SE F G+K +     Y++FDDNG+PTHDAAGEP+ K   KK+ KE   Q  LY
Sbjct:   13 PTWYPPRPIE--GLTEYWDTHYPLRLYNSMTRTKNAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEEFFGMEVELVMNITDVDDKIILRAAETGWLETHPGKELPKDKDEKTKLVMQWAAQQPAEDNMRRTRELSKFWEKSFLDDMASLNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAYESNGSVYFDTAAFGGSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWSSPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALLDNSPR----------QLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFTEFFANVKARLRELGVEKTQKWTPVEKALHGALLDCKEKVFRALSDDINTPLALLHLQQLSKEVNRYMAGDIEKQASMLIRSC----AEYITRILSVFGLVTSATDIGFPLSSNAAGGAD---------QETVLTPVLDIFAQFRDEIREAARSAAADGGDVNALANAILGLCDVVRDEKLPYAGVRLEDRSAGAAVWKLANKDELIEEIEKKKQEKLKXXXXXXXXXXXXXXXXXXLAEKA---KIKPSEMFLGMKDK-----YSKFDDNGLPTHDAAGEPLSKGQSKKLAKEQAKQKALY 681          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A8K1FMX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMX3_PYTOL)

HSP 1 Score: 605 bits (1559), Expect = 1.080e-202
Identity = 338/712 (47.47%), Postives = 438/712 (61.52%), Query Frame = 1
Query:   49 PTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG-------------------------------QNYR---ELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNG--ELMAEGEGALS-LGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGF--SQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKG--------VLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARK---------------KIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLY 1992
            PTW PPRP+    + E  ++ YPL+++NSLTRTKT FVP    RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY+V L MNITDIDDKII RA E G                               +N R   ELA  +E+ ++ DM LL ++ P V+TRVSE++ E+VE+++GII NGYAYESNGSVYF+V +F   +G AY KL+PE VG    EL+AEGEG+LS LG  DKR+  DFALWK+S++GEP W SPWG+GRPGWHIECS MAS   + + +G +DIHSGG+DL+FPHHDNE+AQ+EA ++  QWVNYF+HTGHL+I+G KMSKSLKNF+ I++AL +N++           Q+R LFLLHKYN PMDY D++M  A+  +R FS FF NVKA LR      P +  + E  L  ++ E K++V + L DD +TP A+  LQ+L K +N+Y+          V+  +R AAEY+T+I  VFGL + G  +GF  S  GD           G AS+E +L PVLD+ S+FRD++R   RAG T G        +L  CD VR+E LP  GVRLED    + WKL D   L RE           +E KAE KR+                       KI   E F G K +     Y++FDD+G+PTHDAAGEP+ K   KK+ KE   Q  LY
Sbjct:   12 PTWYPPRPVDT--MLEYWEKHYPLRLYNSLTRTKTAFVPMKGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGYEVELVMNITDIDDKIIIRAAENGWVDAHPGQELPANKEERTQVVMQWASEQPAEENMRRTKELAKFWEKSFLDDMQLLNIKTPAVLTRVSEYVDEIVEFVEGIIRNGYAYESNGSVYFDVNAFSQTRGMAYGKLVPENVGQSGSELLAEGEGSLSSLGKSDKRNPSDFALWKKSKKGEPYWQSPWGEGRPGWHIECSAMASDAIKHLAEGKIDIHSGGIDLRFPHHDNEIAQSEAYFNFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDNTSR----------QLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFSNFFQNVKAKLRELGVEKPQKWTDVEKKLNGAVLECKEKVHQALADDLNTPFAILHLQQLAKEVNRYLATDLEH----VSMIIRSAAEYITRILGVFGLTTNGSDIGFPLSTSGD-----------GAASQETVLAPVLDIFSKFRDEIREAARAGVTSGNVKDLANAILKLCDDVRDEKLPLAGVRLEDGSGSSTWKLADKDELLRE-----------MEKKAEEKRRKXXXXXXXXXXXXXXXXXXXXXAKIKPEEMFLGEKDK-----YSKFDDSGIPTHDAAGEPLSKGQIKKLSKEHAKQKALY 680          
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA)

HSP 1 Score: 603 bits (1556), Expect = 1.190e-202
Identity = 351/675 (52.00%), Postives = 426/675 (63.11%), Query Frame = 1
Query:   31 CKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNR-VLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLG-AGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATF---------EGMGDGT-MDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDK-GDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGED-GKALYTQFDDN-GVPTHDAAGEPIVK--DKKVKKEWEAQNKLYNNAL 2004
            C  + MP W  P P       E +     L V NS+TR K RFV  D +R V WYMCGPTVYAPSHMGHARTYL FDI+RR+++  FGYDV+L MN+TDIDDKII RANE       L+  FE ++ +DMA LGVR P V+TRV+E+I ++V YI+ I+D   AYESNGSVYF+V  F    G +Y KL PE + N EL+AEGEG L+   A DK S  DFALWK+S+ GEPSW SPWG GRPGWHIECSVMAS  F         E  G+   MDIHSGGVDLKFPHHDNEMAQAEA   C QWVNYF+H GHLHIKGFKMSKSLKNFITI+ AL+ N+            QIRL FLLHKYN PMDYGD+ MS +L  E+ F EFFHNVKA LR     +  R  E    L ++LS+ K  V   L DDFDTP ++ AL +LVK  N Y+++        V   +R AA Y+T IF++FGL         S GG+  +G   GG G  A  E  L PVLD L +FR  VR   R  DT GVL+ CD  R+++LP +G+RLEDK G ++VWKL DP  L +ER+QRE E             + A+K+A  K+   E+ + L  +D G + Y++FDD  GVPTH   GE + K   KK KKE+E Q K Y   L
Sbjct:    5 CSPSIMPHWHNPTP-------ENVTHDVGLMVMNSMTRKKERFVTIDGSRSVKWYMCGPTVYAPSHMGHARTYLGFDIIRRILSSHFGYDVTLVMNVTDIDDKIIQRANEQNIECDTLSKQFEAEFHEDMANLGVRPPDVLTRVTEYIDDIVTYIKTIVDKKMAYESNGSVYFDVNEFSNADGMSYCKLEPEQINNAELLAEGEGKLTQDFATDKHSPRDFALWKKSKPGEPSWDSPWGPGRPGWHIECSVMASDIFSQLSGLPSAEDCGNACRMDIHSGGVDLKFPHHDNEMAQAEAHSGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTAR----------QIRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRIFGLIPD------SAGGE--IGFPIGGAGDAADLEEALTPVLDSLMQFRASVRDFARVKDTGGVLSECDKFRDDVLPVLGIRLEDKTGGKSVWKLADPNELMKEREQRELEXXXXXXXXXXXXXEKAKKDALNKLSPEEFMKQLTLDDNGLSKYSKFDDTTGVPTHLHDGEQLTKGQQKKAKKEFEGQRKKYEKYL 654          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE0.000e+094.25Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA8.150e-27161.75Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A812UK10_SYMMI5.520e-21351.99Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A7S3L6K9_9STRA1.690e-21154.32Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis... [more]
A0A5D6YDM0_9STRA4.370e-21048.80Cysteine--tRNA ligase n=1 Tax=Pythium brassicum Ta... [more]
A0A7S1FUV2_9STRA4.840e-21052.85Cysteine--tRNA ligase n=2 Tax=Corethron hystrix Ta... [more]
A0A485LI47_9STRA9.400e-20447.93Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatu... [more]
H3H2X5_PHYRM1.360e-20347.58Cysteine--tRNA ligase n=24 Tax=Phytophthora TaxID=... [more]
A0A8K1FMX3_PYTOL1.080e-20247.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6U0T1A9_9STRA1.190e-20252.00Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:282302..296806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score619.0
Seed ortholog evalue2.6e-174
Seed eggNOG ortholog4787.PITG_03661T0
Model size2846
KEGG rclassRC00055,RC00523
KEGG koko:K01883,ko:K01886
KEGG ReactionR03650,R03652
KEGG Pathwayko00970,ko01100,map00970,map01100
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons17
EggNOG free text desc.DALR domain
EggNOG OGs3QEIV@4776,COG0215@1,KOG2007@2759
Ec32 ortholog descriptionCysteinyl-tRNA Synthetase
Ec32 orthologEc-02_002270.1
EC6.1.1.16,6.1.1.18
Cds size2022
COG Functional cat.J
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348756.5416615-UTR-Ecto-sp6_S_contig106:282301..2831251682348756.5416615-UTR-Ecto-sp6_S_contig106:282301..283125Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig106 282302..283125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348756.552568-CDS-Ecto-sp6_S_contig106:283125..2831941682348756.552568-CDS-Ecto-sp6_S_contig106:283125..283194Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 283126..283194 -
1682348756.5611866-CDS-Ecto-sp6_S_contig106:283691..2837811682348756.5611866-CDS-Ecto-sp6_S_contig106:283691..283781Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 283692..283781 -
1682348756.5702236-CDS-Ecto-sp6_S_contig106:284475..2845741682348756.5702236-CDS-Ecto-sp6_S_contig106:284475..284574Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 284476..284574 -
1682348756.582076-CDS-Ecto-sp6_S_contig106:285464..2855301682348756.582076-CDS-Ecto-sp6_S_contig106:285464..285530Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 285465..285530 -
1682348756.5930412-CDS-Ecto-sp6_S_contig106:286306..2865731682348756.5930412-CDS-Ecto-sp6_S_contig106:286306..286573Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 286307..286573 -
1682348756.6097488-CDS-Ecto-sp6_S_contig106:288474..2885611682348756.6097488-CDS-Ecto-sp6_S_contig106:288474..288561Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 288475..288561 -
1682348756.6214359-CDS-Ecto-sp6_S_contig106:288864..2890111682348756.6214359-CDS-Ecto-sp6_S_contig106:288864..289011Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 288865..289011 -
1682348756.6299553-CDS-Ecto-sp6_S_contig106:289732..2899161682348756.6299553-CDS-Ecto-sp6_S_contig106:289732..289916Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 289733..289916 -
1682348756.6388824-CDS-Ecto-sp6_S_contig106:290519..2906531682348756.6388824-CDS-Ecto-sp6_S_contig106:290519..290653Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 290520..290653 -
1682348756.647614-CDS-Ecto-sp6_S_contig106:290906..2909731682348756.647614-CDS-Ecto-sp6_S_contig106:290906..290973Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 290907..290973 -
1682348756.656609-CDS-Ecto-sp6_S_contig106:291440..2915811682348756.656609-CDS-Ecto-sp6_S_contig106:291440..291581Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 291441..291581 -
1682348756.6654525-CDS-Ecto-sp6_S_contig106:292298..2924141682348756.6654525-CDS-Ecto-sp6_S_contig106:292298..292414Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 292299..292414 -
1682348756.6738122-CDS-Ecto-sp6_S_contig106:293130..2932081682348756.6738122-CDS-Ecto-sp6_S_contig106:293130..293208Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 293131..293208 -
1682348756.6842587-CDS-Ecto-sp6_S_contig106:293938..2940581682348756.6842587-CDS-Ecto-sp6_S_contig106:293938..294058Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 293939..294058 -
1682348756.6916375-CDS-Ecto-sp6_S_contig106:294624..2947461682348756.6916375-CDS-Ecto-sp6_S_contig106:294624..294746Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 294625..294746 -
1682348756.701568-CDS-Ecto-sp6_S_contig106:295415..2955001682348756.701568-CDS-Ecto-sp6_S_contig106:295415..295500Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 295416..295500 -
1682348756.7114289-CDS-Ecto-sp6_S_contig106:296656..2968061682348756.7114289-CDS-Ecto-sp6_S_contig106:296656..296806Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig106 296657..296806 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1050.1prot_Ecto-sp6_S_contig106.1050.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig106 283126..296806 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig106.1050.1

>prot_Ecto-sp6_S_contig106.1050.1 ID=prot_Ecto-sp6_S_contig106.1050.1|Name=mRNA_Ecto-sp6_S_contig106.1050.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=674bp
MATCGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTK
TRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDV
SLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVV
TRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLP
EGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGR
PGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDC
CQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPPPPPPPPVVD
QIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARD
PARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYI
EAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGG
DAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVRE
ELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKR
KAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD
KKVKKEWEAQNKLYNNALAKAKK*
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mRNA from alignment at Ecto-sp6_S_contig106:282302..296806-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig106.1050.1 ID=mRNA_Ecto-sp6_S_contig106.1050.1|Name=mRNA_Ecto-sp6_S_contig106.1050.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14505bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:282302..296806- (Ectocarpus species6 EcLAC_371)
ATGGCTACTTGCGGGGAAGCAGGAGAGGGATGCAAGAAGGCCGGCATGCC CACGTGGGTGCCTCCGAGACCGCTCGGCGAGGGAGGCTTGACGGAGATGA TGGACAGGATGTACCCTCTGAAGGTCTTCAACTCGCTAACGAGGACAAAG GTATGCAGTAGACAAAGGGCGTTGCGCTCCTGATGCGGTAGTCGCGTGTG TATGTCGCTCTTCTCGTGTGGCGGGGGTGTTCTGTTTGCAAGCTGTGGTG CGGAACGTGGAACACGGGAGGATGTGTGCGGTTGGCACACAGCTGTCGCT CAGCTGTGCCCCATTCGCGGAGCTGTGAGTGCGTTGCCAACAGCAGTCTG GCACCTCATGACGTGCATCTCCCCTCAATTCTCCCATTGCAGGGTAAGCA ACCATTCAACAGTTCCATTGGGGCAACGAGAGTGCGACATGCTCACTATG CCTACAGCAGCTGCATATTGTTACCAACAGATTCCGCCGTTCAGCCTGCT GCACCAGTCCGCAGCTTTTAGTGGAGACGATCCACTTTTTGAACAAACTG TCCGTGCCCCATGCTGCTAGCGCGTTAGTTCTGCGCAGGATGCGCCCGTG CCCTACCTGCACAGTTGTCGCGGTGGTGTGTTTTGCAATCCTTCTCTGTC TACCAGAACATTGGCATTGGCGAAAAATAGCCACACGAAGGCTGTGGATC TCCAACTGCTGCGAATAGCACGGGGAGCAGTTTGTCCGCACTTCCCATAC GGTCCCTGGGGAGTTTAAATATCGCACCACATAGCGGTGATTCGTGCGCT CACACGAACACACCACAAACGGTCGTGCGGCAGGATGTTGACCGCGGACA CGCAATAATGATATGGGTCTAGAGGTTAAGATCCCGGGGTCCCCCAAGAC AAGCACTCAAAGGCGTTCTTGTTTATCCACCTCGAGTGTACTGCTGTAAT TTACGTCGTGAGCATCCCGATACATCATGGTACACGGTTCACAAGACACA CTCGGGTACAGCTCTCTGGGACGCTTCGTATCCGTATCGGTGTACTAGGG GCGGAAAGAGAATGCGGGCAGGACATTCTCTGATGAGGTATGTCAAAAAG ACGGCAATGAACAGCTGTCCATCGTGCGTGTTAGGTGTTGGACCGGAAAC CCACTACACTGTCGCTTCCAGCAACCTTGGTGGCCTTCTGTTTTGCACGT CTATTGGCCAATGTTTTGGACGATGTTCCTCCGTCACCAAACTCCTGTCT TATTCCCGCCCCCCCTCTCTTCGCCTCTCGCTCCCCTGTCCTGTCGCCTG CGGCAGACTCGGTTTGTGCCTAAAGACTCCAACCGGGTGCTGTGGTACAT GTGCGGACCCACTGTCTACGCCCCCAGCCACATGGGCCACGGTGAGACCA TTCCCGAGAGAGAGAGAGAGAGGGAAGAGAGAAACAGAGACAGAGACAGA AAGAGAGACTCTCGGTGGGGCAAAGGGGGGGCAGTTTGTCCACACTGTGG TCTCTGGCTAGTTTGAATGTCGTACGTAGGGATGATTTTTGCCGCTCACA CGAACACGCCATTGCCGGCTGTGCGTCAGGACGTTGGTCTAGATTGACAT CTCCGGGCCACCGAAGACAAGCGCTCAAAGGCGCCCTTCATTATTTAGCA ACAGAAGTTCCGTCGTCGTGGGCATTACGATATTCGCAGGAGAGACAAGG AGAGAGGAAGGGGGGGCACGCAGACACGAACGGAAGAGAGAAAGCGGGAT AAACCGCGCGTACCCGTAGAAGGCCGAAGGCCATGTGGTGAACCCGGTCT GTCCCTCGACCGATGCGGCGAAGACGTGTAGGCAGGGGGACGACAAACGC AGCCTCTGAACATCCTGGAGGGGAAGTTTTTCTTCAAGCACGCCTTGTGA AAATCACACGAGGCTTCAATCGCACATGTTTAGCGTCTGATCAAGGCCCA CGCCACTGCATCCCTCCTGCTTTTTTCGTCGCGGCGAAGACACTACTGCT GTCGTCTCTTCTTTCAAACGCTCTGCCGTGTATTCCGCCGCATCCTTGTG TCTCCCTCAGCGCGGACATACCTGCACTTCGATATCCTTCGGCGAGTGAT GACCGATTTCTTCGGCTACGACGTGTCTCTGTGCATGAACATCACCGACA TCGATGACAAGATCATCACCAGGGCCAACGAGGTGCGTCCCCGTCAGCCT GGATTTACCGCACATTCAGCGATGCTTGTAGCTGGACGGACTTGGGGTTT CGATACATTTTTCATCGCTTGCTCGGATGACATGCTCTCTCTACAGCGTG GATGGATGCGAAATGCGGCGCTAAGTTTTGTCATTTTGCTCTTCGTCTAT CTGTCTGTCTGTTTGTTTCTGTCTCTTCTGTCTGCCTGTCTGTCTCTGTC TCTGTCTCTGCAATCTCTCTGAATCTCTGTCTGTCTGTCTGTCTCTCTCT CTCTCTCTCTCTCTCTGTCTGTCTCGCTGTCTCTGTCTCTCTCTCTGTCT CTGCAATCTCTCTGAATCTCTGTCTGTCTGTCTGTCTGTCTCTCTCCCTC TCTCTCTCTCTGTCTGTCTCGCTGTCTCTGTCTCTCTCTCTGTCTCTTTG TCTCTGTCTGTCTGTCTCTCTCTCTCTCCCCCACTCCCCCTCCCTGTCGG CCTGTCGTCCGTCTCCCCGGGCGGGTATCCATCGGGTGGGCATGCATCCC TCTCCACATTTACGCACGTGCATTGCCGGGCGCGTGGGGGTGGGACAGGG CGGGCAAAACTATCGCGAGCTTGCGGCCCACTTCGAGGAGGACTACATGC AGGACATGGCCTTGCTAGGCGTGCGCGCCCCCACCGTGGTGACACGCGTC AGTGAGTTCATCCCGGAGGTGAGAGAAGGAGGAGAGGACTGCTGTTGGAG TTTTTCGGCGCTTTCGGGGGCCCGTGAAGAGAGGGAAAGGGAGGGGGTTC TCGTGCTTCGCATGCCTTGGCTGTCGGACCGTTGACCGCAAGTCCTGGAT AGGGCGGAGCGTTGTTCCTACAAGACCGATGGTCAATCGCTCCCTCCTGC GTTGCCATAGGTGGCGGCTCCAAAATGTTTCTCTACGTTGTATTTTTGGG TTTTAGGGTCTCGGTCTCGAACCCAAATGTTTTTCTCAACGCTCAATCGT TGTATTTTTGGGTTTTAGGGTCTCGGTCTCGAACCCAGAGAGCAAAAGTT GTATAGGTTTCTGTTGTACAACGCTCAATCGCAATCACTATTAAATATTG TACGCTTTTGCTACAACCCCACACCAAATCTTATAATTAACCCCTCTCTC GATTTGATGGTCCTTTCGGGGCCGTCTTCCGAAATTCCTACTCATCCCCC CCCCCCTCGAGTAGGGCGCAGATCGAGAGAAAAAGCGGGCGTTTGCGCTG TTAGTGTCTCCTCGGATTCTGCCTGGCTATCCCGCCGCATGTTGGAGGGT GTCCTTGCCGGCTTTCTTGCTATTTGCTTTCTATTGACCTCGGCTTCTTT CTATTTTCGTTTGAATTGGCTTTCGTTTCTGGTGTTGGTGCCACGTTTGC CTTTTCTTTGCTCCCGTGTGCCTGCCGCGGCGTGTGCGTGGCCATCAGGT GGTGGAGTACATCCAAGGCATCATCGACAACGGCTACGCCTACGAGTCAA ACGGTTCCGTCTACTTTAACGTTCAGGTCAGCACCAGCACTATCCCCAGC ACCACCTGCACCAGCCAGATCACTCGCTGTTTTCCGACGCTTTTCTCAGT GCACGTGTGGCCATGCGCCAACGGGGGCGGGGGGCGTGGTTGACTCCTCA CCGGTAGGCAGCTATAATTGCTGTCATGCCTAAGACGCGTTCCGATCAGC GGTGCGGTGAATGGCGGACTGGCTGTGTGAGGGGGAAAACCGCCTTCAAG GTCGGGCGCCTGCCGCCGCGGTGTGTGGCAGACCTGGCGGAAGTGATTCC TCACTCTACTGTACTGCTGTGAGAGTGTAGTGTGGCTGCTGCACGCCTAC CGCGATCGACGAGGGATGGGTAGATGGGTAGCTTCGAGTGCGTTCGTGTC GCCCTTGGGGGGAGACGAGGCCGGGGGTGCAATAGCCGTTCCTGTCCGCC GTTTCGCAACGTGTTGATCCAACCCCCCTGTTTTTGAACGAGCGGGAGCC CCGAGGTGTGCATGCCTGCAGGCCTGCCCAAACCTACCGTCCCATCCATC CTCTTTCCATTCCCTCACGTCACACGTCACACGTCACACGCCGATGATGC AGCAACGACGATGCAGCAATACGCCTCATCAGTCATTTTTGATCCCCCCC CCCGCACCCCCCCCTCTTCCTCATTGCATTACTGCCTTTTCCTTCGTGGC TATATGCATATGATGTGTGTTGTCCTTCTTGGTTTCCCCAAGTCTTTCGA AGGGAAGAAGGGGCACGCGTACGCTAAGCTCTTGCCCGAGGGGGTAGGCA ACGGGGAGCTCATGGCGGAAGGGGAGGGTGCGCTCAGCCTAGGAGCCGGC GACAAGAGGTCAGACTTTTACCTCCGATCGCGGCCCCCTTGCAAGATTTG TTTCGCGGCTTTGTATTTGTTGGTTGTGACGCCGCACGTATTTCCACCCC AAGAGCCGTAACAGTAGCAGTTTTTGGCCCGAGCCTTCCTCCCGGCTATT TTTCGGTTTTCACTCGCGTTGTTCGGTGTTCACTCGGTGGATTTGTGCCC AATTTCATCCTCTGTTCACTTATTTTCAGCTGCCCGTGTCATCTGACGCC ACTTGAACGAATTCGATTAGTATTGTGAGCGCTTTTACTGTAGAACGTAT GTTTGTTGCACGACAATTTCAATGCTATGATACCCCGCTTGCCGTCATGT TTCCCGAACTAGCTTGGACATGACCTAAGAAAAGGATTGGGGATTAACGG ACGCATCTCGAGCTACTTCATATTTTGTTTTGTGCTTTCTGCAAACCGAA CTTAAGGCTCAGTATTCTAAAAAAGCAATATTTTGTGTTGTTTTTTTCTC CCGATGTGAAAACAACCGAAAAGCGCGCTTTGGTGGCCGGCGGTAATCTG CACCACGGTAGAACTAACCGTGTTTCCCGGAACCTCCAACTCAACATCGT TTTCTCTCTCCCGATTTGAAAGCACCGAACATAATCGCGCCTTCGTGGCC GGTGCAAAGCTTTCCCATGGTATTTCCCATGGCATTTCCAAACAAACCGT GTTTGTTTCACGCACCATACCGTAGGTCGTCGGGGGACTTCGCGCTCTGG AAGCGCAGCCGGGAGGGGGAGCCCAGCTGGCCGAGCCCCTGGGGCGACGG GCGGCCCGGGTGGCACATCGAGTGCAGCGTTATGGCGAGCGCTACGTTCG AGGGGATGGGGGACGGGTGAGAGAGACACAAAGGATACGACATGGGATAA TGTGTTTTTGTGGTGGGGGAGGTAGTTGGTCGGCTGCATGCAGGCGTGAG TGCATCAAAGAGTCAACCGTTGAGAGCAAGGGCGCTATGTGTTGGGGGTT AAATCTGTCGCCGCGGGCGAGAGAAGGATGGATAAATCCGTACGCCATTT TTGTTCTCCATCCGCGTGGCCTACCATCGCACGTGAAGCACGATCGTCTA TGAACTGGGGGTGTTTTGATAGTTTTTCCATGTTGGAGTGGAGAGACCGG GGAAGCGTGGTGATGGCAGTATTGCACGGTCAGTTCGGAGACTGGGAACG ATTCTGGCACGAGACTTCGGCGGGATGTGAAGGACCGCATTTCAGGGGTC TTGGGAGAGGCATGCGTCGTTTTATTATTGTGTGTTTGCGTGATGTTCCT TTCTCCTTTTTTTTTTTTGCCTTTTTGTGGCAGCACGATGGACATCCACT CCGGAGGCGTCGATCTCAAGTTCCCGCACCACGACAACGAGATGGCCCAG GTCAGCTATGCAAAGCTATTAGCACCTATTATAGCTTCCTCTGCCTCTCT CGTTCGGCAGATTGATTCTCTGCTCTCGCCGATTCTAACGCTAAGTGTCC GCTACGCAGAGGCCAATGCACTCAGGCATCTACGCCCCGTGACGCCTTGA TGCGTTTCCCCCATGCCCATCTCGAGCGGCATTTTTTAAATGATTTTTTT CTTGCCTCCTTGGGCCGGTCGTGCGCTGTTCCGTTTTGTTGTTGCCGGGT CAGGCGGAGGCTAAGTACGACTGCTGCCAGTGGGTGAACTACTTCCTGCA CACTGGCCACCTGCACATCAAGGGCTTCAAGATGTCCAAGAGCCTCAAGA ACTTCATCACCATCAAGCAGGCCCTGCAGGAGAACTCGTCACGACAGGCG AGGAATTCAACGCTACGGTTGTTGCGGGCGAAGCGGCCGGGAAAACGAAC GGGGTCCTTGTCCCCCAAAAGTGACTCAGACACGCGTGGTTGTTGTTGCT GGTGATGCTGGTGATGCCGGTGCCACTTCCACTTGACGAACACCCGAGGA ACTTTATTTGCTCATCCCGGTGTTGAATCTTGTTCCTTCCGATATCACCG CCACGCATGCGATCAGGATCACGTTTACGTCCGACTGTTTCGTTTTCATC CCCGCCGCTCCATTACAGTACAGTGCCCGACAAGATCTCTCAATACGCTG ACGGGCTCAATCGGCCGAGAACAATATTCTACCAGCACCAGCGGAAAAAA TCGCATATCCAAGGAAACTCCCCCTTCCCCTCAGGCTGTTCGGGCTTTGC CCCGCCCCCCGCGCGCCGATCGACCCTGTGGAAACACGGAGACCCGTCCC CTCGAGGACGCGTGGTCAATGGCCTAACAGATAAGGCATGCAAAACACGA GTATGTAACGTCCCCCCCCCCCCCGCTCCGCTCCGTGTCGAAAGGGACGC GTGATCAATGGTCAAATGACTACGGCAAACAACAAATGAGCACCCCCCCC CCCCCCCCTCCTCCTCCCGTCGTCGATCAGATCCGGCTGTTATTCCTGCT GCACAAGTACAACACCCCCATGGATTACGGCGACGACGCCATGTCAGGCG CGCTCGCCGCCGAGAGGACGTTCAGCGAGTTCTTCCATAACGTCAAGGCC GCCCTACGGAGAACGACGGCGAGGGTGAGGAGGCCAGGAGGAGAGGCAAC AGAGCGCCAGCGCTTTTTTTTTTCAAGTGGCAACAGCGGTGGCATTTAAT TTGGTATTTTTACACACATTTTATGTCATGGGCTATGTGTATGTAGTGTT GTTCTTTTTTGTCTATTTTTGTTGTCGATTCTCATGGCCAAGTTTATTTT GTTTTTTTTTCGGTTTCGGGCGAAGTTTTCCCCGCGGGCCGACGACGGCA AGCACAGCGTGAGTTTTCGCCCTGTACGCACCAGTGGCGCGCTTTCCAGC TTTAGGGGAGTGCGTCATGCGGTGTTTTTCTGGTCTTGAAGTTTAGCTCA AGGTACTGTTGTTGGTGTGTTTGACTTGTTATGTATACTAGCCACACAGG CGGGCGTTCGTCCAGACTCTCACCACGTCGCTGCGTCGGAAACTGCTGTT TTGTGTTGGCGACTTGTTCGTCCACACTTGAGCAACACTTGAGCAGCACC AAAAGAGGGACGGGGCTTGGGAACCACCTGTACGCGAAAGTACATGGCCA CTTGTACGTCCAGCCATCGCGTGGTGAATCGAATGACGGGGTGGCCAACA CCTTGGCACAGTCGTGGGAATGCCCCTAAGGCATGACCTTGGCACATTCA ACCAACGTCCGGTCTCCGCTCCGTGAACAGAAGTAAATCAACCACGTGGT GACCCCCCCCCCCCCCCCTGTGGTCTGCCCTTTTCGCGTGTCCAGGACCC CGCCCGCACGAAAGAGCCGGAGCTCGCGCTCATGTCAAGCCTTTCGGAAG CCAAGAAGGAGGTGAAGAAGTGCCTGTGCGATGACTTCGACACGCCGGGG GCCATGGGAGCGTTGCAGGAGCTTGTGAAGAACATGAACAAGGTGAACGA GCGTGGTTATTGATGTAGGTGTGGACCGTTAAGTGTTGCATGAAGGGCGT GACGGTCGTCTGATGTTGTAGGTGTGCACCGTAAGTGTTGCGTGAAAGGC GGTGAAGGTCTTTCCCAACCAGGCCGGCTTTTGCACCTACCGTCCCTGTT GTTGTACCGTTACGTGGTTCGATCGTGCGGTTAAGGTCTTTTCTCAGCCA GGCTGGCTTTTGCACCGTCACCCCCTCGAATTGGTTTCGTCTGATCCCCC GTCTATCTTTCTTTTTGTGCCCCTGAACCTTGGGTGCTGTTGCAGTACAT CGAGGCGAAGGAGAGGGCGGGAGAGCCGATCGTCGCGGACTGTGTGCGAG GGGCTGCCGAGTACGTCACCAAGATCTTCAAGGTCAGGTCTTCGAGCATG TTAGTGTCTTGCGAGAACCCGTTGTAGACGCTTGTTTTTCAGACGTACTT TCTCCGTCATGCATAGGCGGCAACCTATCGCTCGCTTTGTGTTGGGTAGG GCAATGCCTGTGGGGCAGCAGAGACGGGACCGTGGGAAGTGCGATGCCCT CGATGCGTGGTGGCGGCAAGGGCTCTCACCCCCCCCCCCCTGTACATAGC ACTAGCGCGTTTTATCAGCGACCGACCCTCATGCTGTTGTCGTTGGTGTT GTCCCCATCTCCTTCCACGGGCAACTAAGAACCATTCCGTGTTGTGTGTT TCCCTCCCAGACTCATTTCCTACCCCGTTTTCCTGGAGGTACTCACTCAG ACACACACAAGTCACGACGTCGATGGTGGTAACCACACACACAGCCTGAT TGAGATTGAGATTGAGTGTACTCCTCATACTCGACGAGGGAGACTGCCGT CGTCCAACCCCTGCGTCCCCCCTAGCCGGTAGAACCCTTGGACTATACGA CCGCGTGCTTTCTTTTTTTTTCCCGCTGCAAGACTGGCGTCTGCTCATTG GTAAAAAAACAGGGGGTCCCCCCAGATCATGGCCTATTGAAACGTTTTCC GCTTTAAGCCGCACTGGTTCGTGTATTTTCAATGGTCAGTCGGTTAGCGC GGTCGGCGCTAGTTATGTTTTCGGGAGTAATCTACGGCAGCTTTGAAAAC CGGTAGGTACAGGGATGGTGTTATCTTGCGTCATGCCACCCACGGTACTC GTGCCACTCCGCGGCAGATGCGTGGAGGACGATGGAAGATTGAATCTTGT CCAGCCGCCCATGTCTTGAGCTGTTGGTTGCACAGACGGAGGACGGCATT ATACCGGACGAAAAGAGACCCGAAAATCTCCTTCCCGCGCGTTGCCCAAA TTGAGACAAAGTTGCGTGCTATTGGCCTTGTCAAGAGCGAGCGAGTACGA TGTTGTGCAGGTTCGAATCTGCAAACGCTCTAGGGCCCTTGTCGTCCTGC ATGATGCCGTCCCCCAACTCTGCAACAAGCAGCCGGAGATCGGCAGGGTG GCTACGAACAAAAAAAAAAAAACTCCCGTCGCCCCCCAAACATCTGAAAC GGGATCGCCCACCGGCAAGGCGCAAGACGGCAGGTGGAAGTGTGTTCCAT GCCGCATCATGTGAGCTCGTCGCCAAGGGGACATGAGGGACAGAACATTC GCGCGTGTATTTTCGTGCACGGGGCGGCGCGCGTGCCGTTCGTGACGAGA CATCGGCCTACCTGTGTTGTTTGTGCGTGTCTGCAACAACCATTTGATTT TTGGCACCCTTTTCGTCGTGGACTAGCCGTGGACTAGCCGAGCTTTGAAG ATGAGCGCGGGTGTGGTTATCTTGTGTCACTTACGGTGGAGAATTTTTCT CAGATGGGGCTCCCGCCGCTGCCCCCGAAACGAAGCTCCCACTCTCGTGC TCACCGACAAGCCCCGCGCCATACCGGCAAGGCCGGGTATTTCCCGTCAT CCTTCCATGTGACTACGGGAACCTCACCAGAGAGTGCCACCATAGATGGA TGGTGTGCTGGCGGTGGTGGTAGGCCAGGTTGAATGTCTCCGCCATCTCG TCAGCGGTGCAACTGGCGGGAATTTTCGGCACAGAAATTCTGACTAAATT AGTATTATAGTACCTCCAAAAGGCCCAAGGTTCCCCGGTACCTCCCCTCT CGTGGCCGGCCACATTGCCCCCCCCCCCCCCCGCACCGAGGTCAATGGTC AAACGACTACGGCATGCACGACTATGTACACCCTCCCGCCCGCACCGGTG CACAGGTGGAGTCCCTCCAGGATCAATGCCTACCCTCTTATTTTATTCTT TTGCACCGCCACGCCCCCCTACGTACTTCACAGGTTTTCGGGCTGGCGTC TCCCGGCCCAGCGCTAGGCTTCTCCCAGGGGGGAGACGCAGGCGTCGGCG GGGACGCCGGCGGGGAGGGGGGCGAGGCCTCTCGGGAAGCGATCCTGGGA CCGGTTCTCGACGTCCTCTCGGAGTTCCGCGACAAGGTGAGGGGGTGCGG CCGCGCGGGGGACACGAAGGGGGTGCTGGCGGCCTGCGACCACGTGAGAG AAGAGCTGCTGCCTGGCGTCGGGGTGCGACTCGAGGACAAGGGGGACCAG GTGCGTGGTGATTTTTGTTTTTTTTTGGGACTGCTGTGACGCTTGCGTTG TGGGTATGGATGTTTTTGTCCACGTTGGAAAATTCTACGGTACTACGGTA GTAGTACTTTTTTTTTCTTTTTTTTTTGCCTTGGTTGTGTTTTTGGCTCC CGTTGCTGGGTGCTGCCTGTTTGTTGTCTTGTCGTCGTCCGTGTTTGTTG GTGGTTGTGGTGGCGGTGTTGGTGGTGTGGTGGGCTCCCTGTTGGTGATT GTTGTTGTCTCGTGTGCTTTGCGCGAGAACACGCCCGGGTCGAATTGTTC TTCCTCTGTGAGGATGGTTGTAGATGGGTTCGGAGGAGGCAGCGATTTGG AAGCGACCGATGACAAGACGAGCACGTTTGAAGTACGCCGTTTGCGCTGC AGAGTTCGCTGCCCTCCGCTCCTTGACCGAAACCGAATCAGCACATAATA CGAACCATGGGCGGAGCTTTTGATGTGTTTCAGTCTCCCGTGAGTTAGAT TGTTCTTCTTCCGGCTGTATCTCGGTGGTGCTCTTGAACCACACGAAAAC CGCTGGTGCTCTCGACGCTCTGTCTTCTCTCCCGCTGTTGATCGTTTGGG TTCCGGTTCGTTTTTCATGTTTTTGTCTCTAGTTTTGGTCCTCTTTCGAC GGGACGTCGCGGCAGATATTCGCGGAGGCCGTGCCGTTCTTCTTCAGTGC AGTTGTTCGTGGTTATTCCGGCGTTTTTAACACGGTCCCGTCCCAGTTTA CACCGCGACTGCTGCTGATATTGCAGGCGGTGTGGAAGCTCGAGGACCCG GCCGTATTGGCAAGAGAGCGACAGCAGCGGGAACAAGAACAGGTGCGCAT GATAAACCCGTTTCCAATGCATGTCTTGCCATGTCTGCACCTTGTGCCTG TCGGGGACCCACGGATGGGACGGACCCACGAAGAGGACGGAGTTGCGTAT GGTGCAAAGCGTTGCATTTTATTTTTTCTTCATTTTCTTGGTTTCCACAC CAAACTGCCGCATCAGGTCTGGCCTGACCCACGCCCTGCGTGCCTGTAGC GAGCGCGTAGGCAGAAGAACGACATCGTACAATATTCCGGTGCCACCCAT CTACGGTACATAGCCCACGACGCCATACCCAGGGCCATCCAAGCTACGTG CGGACTCTTCGCGATGAGTTGAGCGTTGTCGCCGTTGTCGGTGGTCTCCC GGTTTGGTTTTTTCTTGGAACACTTCCGTCTTTGCCGGCAGTGGGTCACG TCGGTCAAATCATGTTTGCTCTGTGACGTGCCAAGTCGGTCGAGGCACGA GAGCGGAACGTGCCCAGCTGTTCGGAAGCCTTTCTCGAGCATGCGTACCA AACCTAAGCATAGCTCTTGTGCACTAGTTCTTCAAAGCCAACAAAAAGTG TGTGACCGTTGGCGTGCGGAATTGTGTTCCAGTTAACATGACCGTCGCGG CGTTTCTTTGTTCGTGTTGTCGTGACCATGACCACGGAGGCGGCAATAGA GCGCACCTCCACCACCTTTGTGTCGATGCTGCCCCGTTGAACTCAATGGT TGCATGTTTGTTTCTGGCACCTTTGGTTGGAAGTGTCCTAACTTCGGCGA ACACACGACATAGATGCTTCCGACCATCTCACCCATCAGGTCACCGCGCG CCCCCCAGCAAAGCCACCGCCTTTCATTCGCTCCTTCTTGTTGTCTTTTG TGAATTCATGGTATTCACTGAAACGGCATCAGTTGCGCCGCTTGGAGGCG AAGGCAGAGACGAAGAGGAAGGCGGCAGAGAAGGAGGCAAGGAAAAAGAT CCCCGCCAGCGAATACTTCCAGGGATTGAAGGTGCAGTGTGGCATTGTAG ACGAAGAAGGGAGAGGGCACCTCGGACTGTCCAGTGCCTGTTAGCGTCGG CCTCTCTGATAACATGGACGCGGAGCGATAGTCATGCGCTGGTTCTCATC GTACCCTCGTTGTAGCCCCAAGTGCCGATTGTTGTTTTTGCAGGCTTTTG AGATACGGTATCATTTCTCACGCCCCCGTTTTTTTATGTGCGCAGTGTGT GCCTCTCGCGTCGCGACTTAACCGCTGTACCACATATCCACGAGGCTCGT GTAGTTGCGGTCCGGGTGTGTTGTGGCAACCCGATGACCCTCACGCGCCT ACAGGCCGGTTTTCTGGTGGTTGGACGGGCGTTGTTTTCGAGAGACGAAA CGCAAGTTGGCGGTACGTTGGGTAGAGTTCATCAGCAGAAAAGCACGGCT AAGATTCGGCCGCATTCGAACGTGGCGCAATTCGTCCGCGTAGCTCTCCC CGATCGGTATGGGCTGACGAGTCGAGCGAAGTTAATATGGTGGATTGATC GAAAAGCCATCATCCGAGGGCGAGCGAGGTCTGTATCTCGATGGCTCTCT ATGAAAAGGGCTGCTGTCTGTGCGCGCGCATTTTTTTTGTGTTGTTTTAC GCGCCTCCCTTCCTGTTATGTTTTTTTTTGCCTGTCGCCTTGTGCTCGGG TGGTGCCTCTCATTCGTCCGCCCAGGGCGAAGACGGGAAGGCGTTGTACA CCCAATTCGATGACAACGGCGTTCCCACGCACGACGCTGCCGGCGAACCG ATCGTCAAGGACAAGGCAAGAAAGAACGCTCTTCTTTTGACTAAATGCCC GAATCCATCCGCCGCGTACAGCCATCGGTTGCTTTTTTTTTTGGAGTTTC TCGAGCTCTTGTTACTCAGGAAGAGGTTGCGGGCAGCTGTCAGGCCGACT GTTTTTCTTATCACGGCTTGCAGCCCGGGCGCAGAAAAGCTGTTTGTAAC GCCGATCCCCCACGAGAGGCTTTTCTTCTGTTCGCCCACTCTGTCGGTTT GCGTGGCAATTAATGCAAAATAGGCAACGCCTGCCGACGCGTGCAATATC GTCGTATGTTGCCCAGCAGACCAGTTTCGAAGAGCTCGTCTAGGGGGCGA CGCGGTATAGTTTCGGTTTATGTTCTTGCACACGCTCGTATGCAGACCTT CACAAGGAATGGAGGTAGTTGCCCCTTGGTCACATGCTCCTCCTGCCGCC CCCTTTTTTTTTCCCGCCCAACCGTCGTGCCTGTGTATTGTTGCTTGTTG TCACGAGAACAGAAGGTCAAGAAGGAGTGGGAAGCCCAGAACAAGCTGTA CAACAACGCGCTAGCGAAGGCCAAGAAATGATTATTCTATTATGGAATTT TCTTGCACAAGGTTTGGGTTGTGTACCGGTTTCGAGCAACTTTCGGCGCA CAGAAAAGGAGGGTGTCCACATCGCACAAAAGATTCGTTGAGCGCCGTTG ATGCAATCGGCGCTGAGGAAGGCTTCAGAGAGCCAGGAGCACAGGGTGGG CAGGTGCTGTTGCGCTCTGGTGCCGTTGTTGTCGTCGTACACAGCACCGT AGGAGTATGCGCTATGCTCGAGCACCGCGGTGGTCGGTGGGTAGCGGTCG CGAATAAGATTTTCACTCCTCACCAGAACCAGTGTTAAGGGTGCATTGTC GTATGGTACGTGCCTGTAGTTTTTTTTTTTTAGAGTTTTGTTTCAACGGG ATTGTTCAGCGACGCCCCCCAGTGGCATGATGTTTTTTTTCGTTGTACCG ACACAGAGCGCGAACAGTGCGTTGGGATCGGCTGCCGCTTTTCGCAAGAC GGAGACGCAAGCGTGATGGCGCAGGCTTTGAGGTTGGAAATGTTCCGAAG GTATAGCTGACTGAGTGAAGAAGGGGTCTCAAACTTTCAAGTACAACAGC CCGCGGACACACATAACGGGCAGGAGATGGAACTGCATACAGCAACACTT GCGACTTTGTAGCCTGTGTACATGAAGGCAGTTTCTCATGATCGGAGAGA TGTCGAGGAATGTATCGTGTTGTTCGACCTGTAGACTACGCGTTTAACAT GCATGCATGATAAATGTACTTAACCTCCTAGTAGTATCAATGGCTGCGTC AACTTGGCTTCGAGGCAAATATTCTCTGCAGATGTTCCCACTCCAAGAAC GAAGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig106:282302..296806-

>mRNA_Ecto-sp6_S_contig106.1050.1 ID=mRNA_Ecto-sp6_S_contig106.1050.1|Name=mRNA_Ecto-sp6_S_contig106.1050.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2022bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:282302..296806- (Ectocarpus species6 EcLAC_371)
ATGGCTACTTGCGGGGAAGCAGGAGAGGGATGCAAGAAGGCCGGCATGCC
CACGTGGGTGCCTCCGAGACCGCTCGGCGAGGGAGGCTTGACGGAGATGA
TGGACAGGATGTACCCTCTGAAGGTCTTCAACTCGCTAACGAGGACAAAG
ACTCGGTTTGTGCCTAAAGACTCCAACCGGGTGCTGTGGTACATGTGCGG
ACCCACTGTCTACGCCCCCAGCCACATGGGCCACGCGCGGACATACCTGC
ACTTCGATATCCTTCGGCGAGTGATGACCGATTTCTTCGGCTACGACGTG
TCTCTGTGCATGAACATCACCGACATCGATGACAAGATCATCACCAGGGC
CAACGAGGGCGGGCAAAACTATCGCGAGCTTGCGGCCCACTTCGAGGAGG
ACTACATGCAGGACATGGCCTTGCTAGGCGTGCGCGCCCCCACCGTGGTG
ACACGCGTCAGTGAGTTCATCCCGGAGGTGGTGGAGTACATCCAAGGCAT
CATCGACAACGGCTACGCCTACGAGTCAAACGGTTCCGTCTACTTTAACG
TTCAGTCTTTCGAAGGGAAGAAGGGGCACGCGTACGCTAAGCTCTTGCCC
GAGGGGGTAGGCAACGGGGAGCTCATGGCGGAAGGGGAGGGTGCGCTCAG
CCTAGGAGCCGGCGACAAGAGGTCGTCGGGGGACTTCGCGCTCTGGAAGC
GCAGCCGGGAGGGGGAGCCCAGCTGGCCGAGCCCCTGGGGCGACGGGCGG
CCCGGGTGGCACATCGAGTGCAGCGTTATGGCGAGCGCTACGTTCGAGGG
GATGGGGGACGGCACGATGGACATCCACTCCGGAGGCGTCGATCTCAAGT
TCCCGCACCACGACAACGAGATGGCCCAGGCGGAGGCTAAGTACGACTGC
TGCCAGTGGGTGAACTACTTCCTGCACACTGGCCACCTGCACATCAAGGG
CTTCAAGATGTCCAAGAGCCTCAAGAACTTCATCACCATCAAGCAGGCCC
TGCAGGAGAACTCCACCCCCCCCCCCCCCCCTCCTCCTCCCGTCGTCGAT
CAGATCCGGCTGTTATTCCTGCTGCACAAGTACAACACCCCCATGGATTA
CGGCGACGACGCCATGTCAGGCGCGCTCGCCGCCGAGAGGACGTTCAGCG
AGTTCTTCCATAACGTCAAGGCCGCCCTACGGAGAACGACGGCGAGGGAC
CCCGCCCGCACGAAAGAGCCGGAGCTCGCGCTCATGTCAAGCCTTTCGGA
AGCCAAGAAGGAGGTGAAGAAGTGCCTGTGCGATGACTTCGACACGCCGG
GGGCCATGGGAGCGTTGCAGGAGCTTGTGAAGAACATGAACAAGTACATC
GAGGCGAAGGAGAGGGCGGGAGAGCCGATCGTCGCGGACTGTGTGCGAGG
GGCTGCCGAGTACGTCACCAAGATCTTCAAGGTTTTCGGGCTGGCGTCTC
CCGGCCCAGCGCTAGGCTTCTCCCAGGGGGGAGACGCAGGCGTCGGCGGG
GACGCCGGCGGGGAGGGGGGCGAGGCCTCTCGGGAAGCGATCCTGGGACC
GGTTCTCGACGTCCTCTCGGAGTTCCGCGACAAGGTGAGGGGGTGCGGCC
GCGCGGGGGACACGAAGGGGGTGCTGGCGGCCTGCGACCACGTGAGAGAA
GAGCTGCTGCCTGGCGTCGGGGTGCGACTCGAGGACAAGGGGGACCAGGC
GGTGTGGAAGCTCGAGGACCCGGCCGTATTGGCAAGAGAGCGACAGCAGC
GGGAACAAGAACAGTTGCGCCGCTTGGAGGCGAAGGCAGAGACGAAGAGG
AAGGCGGCAGAGAAGGAGGCAAGGAAAAAGATCCCCGCCAGCGAATACTT
CCAGGGATTGAAGGGCGAAGACGGGAAGGCGTTGTACACCCAATTCGATG
ACAACGGCGTTCCCACGCACGACGCTGCCGGCGAACCGATCGTCAAGGAC
AAGAAGGTCAAGAAGGAGTGGGAAGCCCAGAACAAGCTGTACAACAACGC
GCTAGCGAAGGCCAAGAAATGA
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