mRNA_Ecto-sp6_S_contig106.1050.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE) HSP 1 Score: 1239 bits (3205), Expect = 0.000e+0 Identity = 623/661 (94.25%), Postives = 631/661 (95.46%), Query Frame = 1
Query: 1 MATCGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDKKVKKEWEAQN 1983
MAT GEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSF+GKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQE+S+ QIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPEL LMSSLS+AKKEVKKCLCDDFDTPGAMGALQELVK +NKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAG EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYF+GLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDK K ++N
Sbjct: 1 MATAGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSR----------QIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGGXXXXXXXXXEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDKARKNALLSRN 651
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA) HSP 1 Score: 778 bits (2010), Expect = 8.150e-271 Identity = 410/664 (61.75%), Postives = 476/664 (71.69%), Query Frame = 1
Query: 46 MPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGAL-SLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGAL-QELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQRE----QEQLRRLEAKAETKRKAAEKEARKKIPASEYFQG--LKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNALA 2007
MP W P P G GL + + +PL+V NSLTRTK F+PK+ RVLWYMCGPTVY SHMGHARTYLHFDILRR+M D+F Y+V L MNITDIDDKII RAN+ N+R+LA+HFE DYM+DM LGVR P +TRVSEF+PEVV YI+ +I NGYAYESNGSVYF+VQ+F KGH Y KLLPEG+GN ELMAEGEGAL S GAGDK+S DFALWK+S+EGEP W SPWG GRPGWHIECSVMAS TFE GDG MDIHSGGVDL+FPHHDNE+AQAEA Y+C QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQ ++ QIR+ FLLHKYN PMDYGD+ M+GALA ERTF EFFH VK+ +R TA D R E E+AL L E K V+ LCDDFDTP A+ L +LV+ +NKYI+ K AG VR A EYVT+IFKVFGL + G +GF + G+ SRE +GPVLD LS FR +VR C RAGD+ GV++ACD VR++ LP +GVRLEDKGDQ VWKLEDPAVLA E+ ++E Q QL + E K + KAAEK A+ KIP E F+ G D K YT FD +GVPTH A G + K+ K ++KEW Q Y LA
Sbjct: 8 MPEWHGPPPFGVEGLAPELLQFFPLRVTNSLTRTKIPFIPKEGQRVLWYMCGPTVYDGSHMGHARTYLHFDILRRIMADYFNYNVVLVMNITDIDDKIILRANQRNLNFRDLASHFEADYMEDMKALGVRPPEHITRVSEFVPEVVAYIEQVIANGYAYESNGSVYFDVQAFHKHKGHHYGKLLPEGLGNAELMAEGEGALTSCGAGDKKSQSDFALWKKSKEGEPQWESPWGGGRPGWHIECSVMASKTFELYGDGCMDIHSGGVDLRFPHHDNEIAQAEAHYNCAQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTAR----------QIRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKVFGLVTSGVDMGFDVEQEGGI-----------SREEAMGPVLDALSTFRTQVRTCARAGDSAGVISACDQVRDDALPPLGVRLEDKGDQVVWKLEDPAVLAAEKAKKEADAQQRQLEKEEKKRQAAIKAAEKAAKDKIPPCEMFRSHVTDGPDAKPKYTAFDADGVPTHGADGAELTKNAIKGLRKEWTKQKTAYEKYLA 650
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI) HSP 1 Score: 629 bits (1622), Expect = 5.520e-213 Identity = 326/627 (51.99%), Postives = 435/627 (69.38%), Query Frame = 1
Query: 94 EMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSR---EG--EPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQ----AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVK 1947
E+++RMYPLKV+NSLTR+K RF+P+D +RVLWY CGPTVYA SHMGHAR+Y+ DI+RR+ DF GY++ LC NITDIDDKII R++E +RELAA E ++ +DM LGV+ P ++TRVSE+IPEV+E+++ +I GYAY SNGSVYFN +FE GH Y KL+PE +GN EL+AEGEGAL+ DK++ DF LWK+++ +G EPSW SPWG+GRPGWHIECSVM+ E +G G +D+H+GGVDLKFPHH+NE+AQ+E D QW+NY+LHTGHL+IKGFKMSKSLKNFITI+QAL+E+S QIR FLLHKYN PMDYGD M+ A+ E+ FSEFFHNVKA LRR P + ++ALM K+ V+ LCDDFDTP A+G L++L++ +NKYIE+ G +++ R Y+T + + FGL +GFS GG++ G ++E +L P LD L++FR+ VR GDT VLAA D +R+++LP +GVR+EDKG +VWKL+DPA L ER+Q+E + + E +AE +RK E+E + K+P + F+ + + ++ FDDNG+PTHD G PI K
Sbjct: 10 EVLERMYPLKVYNSLTRSKVRFIPRDPSRVLWYQCGPTVYAESHMGHARSYVCLDIIRRIAQDFLGYNIVLCQNITDIDDKIIIRSSERNIPFRELAAVNEAEFFEDMNRLGVQLPDMITRVSEYIPEVIEFVEALIAKGYAYASNGSVYFNTGTFE-SGGHKYGKLVPEQIGNSELLAEGEGALTAND-DKQNPTDFVLWKKTKTHADGMFEPSWESPWGNGRPGWHIECSVMSKCAMEKLGGGHIDVHAGGVDLKFPHHENEIAQSEGCLDSHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSAR----------QIRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGV-VGSAVLSSTAR----YITSVLRTFGLVQDDNDIGFSL---ESSGGESAG-----NKEELLAPYLDALTKFRETVRIAAINGDTAAVLAAADCLRDDVLPPLGVRMEDKGSGVDVVSVWKLDDPATLRLEREQKEAVKRAKEEQRAEARRKQLEREEKAKVPPQDMFRSMIDQ-----FSAFDDNGMPTHDTQGVPISK 606
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA) HSP 1 Score: 626 bits (1614), Expect = 1.690e-211 Identity = 346/637 (54.32%), Postives = 434/637 (68.13%), Query Frame = 1
Query: 118 LKVFNSLTRTKTRFVPKD-SNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLG-AGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGM-GDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPE-LALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKAL-YTQFDD-NGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNAL 2004
L V NSLTR K F+ D SN++ WYMCGPTVYA SH+GHARTYL FDI+RR++ D+FGY L MNITDIDDKII R+NE ++ EL+ H+E +Y +DM LGV+ PTVVTRV+E++P++ YIQ I++ GYAYESNGSVYF+V +FE +G Y KL PE + N L+AEGEG L+ A +K+S DFALWK+S+EGEPSW SPWG GRPGWHIECSVMAS + G TMDIHSGGVDLKFPHHDNEMAQAEA+ QWVNYF+H GHLHI+G KMSKSLKNFITI+QAL+ NS QIR+LFLLHKYN PMDYGD+ +S A+ AE++F+EFFHNVKAALR + + P + L +L++ + +V L DDFDTP AM L +LVK N Y+E + +V VR A Y+TK+FKVFGL P ++GF G +GGEG +E IL PVLDVL FR VR RAGDT+ +L CD R+ELLP +GVRLEDKG+ +VWKL++PA L RE +Q+ EQ R+ KEA K++P +E+ + L ED L Y++FDD G+PTHD GE + K+ KK +K ++ Q Y L
Sbjct: 30 LSVMNSLTRQKDHFITSDGSNKLTWYMCGPTVYAESHLGHARTYLGFDIIRRILEDYFGYQCELIMNITDIDDKIIERSNERNMHHLELSKHYEMEYHKDMQALGVQPPTVVTRVTEYMPDITAYIQTIVERGYAYESNGSVYFHVTAFEQAEGMHYCKLAPEQIHNASLLAEGEGKLTQSHATEKKSPRDFALWKKSKEGEPSWESPWGPGRPGWHIECSVMASDVLRKLTGHPTMDIHSGGVDLKFPHHDNEMAQAEAECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSAR----------QIRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETETTQ---VVGLVVRSVASYITKMFKVFGLI-PNDSIGFGL-----EDGSSGGEG----KEEILSPVLDVLMAFRSSVREQARAGDTQAILKLCDKFRDELLPPLGVRLEDKGEVSVWKLDNPADLVREMEQKRFEQERKAXXXXXXXXXXXXKEALKRLPPTEFLKQLTLEDNITLAYSKFDDATGLPTHDNQGEELNKNQMKKAQKLFKTQQGKYEKWL 643
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A5D6YDM0_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDM0_9STRA) HSP 1 Score: 624 bits (1609), Expect = 4.370e-210 Identity = 346/709 (48.80%), Postives = 448/709 (63.19%), Query Frame = 1
Query: 49 PTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG------------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSL----GAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDT----------KGVLAACDHVREELLPGVGVRLEDKG-DQAVWKLEDPAVLARERQQREQEQLRRLEAKA----ETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNAL 2004
PTW PP P+ LTE ++ YPL+V+NS+TR+KT FVP RVLWYMCGPTVY +H+GH RTY FD +RR++ D+FG++V L MNITDIDDKII RA E G + + L++ +E+ ++ DMA LG++ P V+TRVSE++PE+VEY++ II NGYAYESNGSVYF+ +F KG AY KLLPE VG EL+AEGEG+LS G DKRS+ DFALWK S+ GEPSW SPWG GRPGWHIECS MAS + G +D+HSGG+DL+FPHHDNE+AQAEA +D QWVNYFLHTGHLHI+G KMSKSLKNF+ I++AL++NS+ Q+R LFLLHKYN PMDY D++M A+ +R FSEFF NVKAALR A + E L ++L EAK+ V + L DD +TP A+ LQ+L K +N+Y+ + AGE +V+ +R AAEY+T I +VFGL +GF D G G A +EA+L PVLD+ ++FRD++R RAG + + +LA CD VR+E LP GVRLED+ AVWKL + L E Q++ E+ R+ E K + RK A EAR +IP S+ F + Y+QFD++G+PTHDAAG P+ K KK++KE LY L
Sbjct: 14 PTWYPPAPMKS--LTEYWEKHYPLRVYNSMTRSKTPFVPMHGRRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGFEVELVMNITDIDDKIIIRAAENGWLEAHAGQESELPADKDARTRTVMAWAATQPAEETMRRTKALSSFWEQSFLADMASLGIKMPAVITRVSEYVPEIVEYVERIIRNGYAYESNGSVYFDTVAFAQSKGKAYGKLLPENVGQSELLAEGEGSLSAAAATGKSDKRSASDFALWKTSKPGEPSWASPWGAGRPGWHIECSAMASDVLKHHAGGQIDVHSGGIDLRFPHHDNEIAQAEAYFDFPQWVNYFLHTGHLHIEGLKMSKSLKNFVKIQEALRDNSSR----------QLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFSEFFQNVKAALRALGADKTQKWTPREKKLSAALLEAKERVHQALADDLNTPAALLHLQQLAKEVNRYMAS---AGE-LVSMIIRSAAEYITHILRVFGLVPAASDIGFPLTADGGAAG--------ADQEAVLAPVLDIFAQFRDEIREAARAGGSGDXXXXGALARTILALCDQVRDEKLPLAGVRLEDRAAGSAVWKLANKDELIEELQKKADEKRRKDEQKRARLEDEARKRAALEARAQIPPSQLFTRETDK-----YSQFDESGIPTHDAAGAPVSKGLVKKLQKEQAKHKALYEKRL 693
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA) HSP 1 Score: 622 bits (1605), Expect = 4.840e-210 Identity = 352/666 (52.85%), Postives = 433/666 (65.02%), Query Frame = 1
Query: 31 CKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKD-SNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAG-DKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMG--DGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGEDGKA--LYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNAL 2004
C MP W PP G + D L+V NSLTR+K F D SN V WYMCGPTVY SH+GHARTYL FDI+RR+M+ +FGYDV+L MNITDIDDKII RANE ++ +L+ E +++DM+LLGV P V+TRVSE++PE+V+YI I+ G+AY SNGSVYF+V +F + H Y KL PE +GN EL+AEGEGAL+ G +KR+ DFALWKRS+EGEPSW SPWG GRPGWHIECSVMAS F MG G MDIHSGG+DLKFPHHDNEMAQAEA+ QWVNYF+H+GHL IK KMSKSLKNFITI+QALQ N+ QIR+LFLLHKYN PMDY DD M+ A E++FS FF NVK ALR +T + + E E L + + A+ V+K L DDFDT AM ALQ+LVK +NKY+E + A + IV+ VR AA YVT++F+VFGL S G +GF + G G SRE +L PVLD + EFR R R GD KGVL CD R+ +LP +GVRLEDK + +VWKL DP L RE +Q + E R+ A K+A K+P EY + L +DG Y F D+G+P +GE + K+ KK KE+ A K Y L
Sbjct: 10 CPVGIMPDWRPPSSSAADG-SPSFD--VGLQVMNSLTRSKVPFRTLDGSNNVKWYMCGPTVYDVSHLGHARTYLGFDIIRRIMSSYFGYDVTLVMNITDIDDKIILRANERDISFTDLSRENEAGFLEDMSLLGVDPPDVLTRVSEYVPEIVDYIGDIVKKGFAYASNGSVYFDVGAFRRAEDHVYCKLCPEAIGNAELLAEGEGALTQEFGSEKRAPNDFALWKRSKEGEPSWESPWGPGRPGWHIECSVMASQVFRQMGVKGGCMDIHSGGIDLKFPHHDNEMAQAEAQSGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTAR----------QIRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLETQGPA-KAIVSLVVRKAAVYVTEMFRVFGLISAGTDIGFPL--------EEGEGAGAVSREDVLAPVLDAVLEFRAGARDAARTGDAKGVLTKCDAFRDAVLPELGVRLEDKTEGSVWKLADPEELRREAEQAKAEMERKXXXXXXXXXXXARKDALNKLPPEEYMKQLTLDDGSGNKKYGTFGDDGLPLTVHSGEALNKNQVKKASKEFSAHKKRYEKYL 653
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A485LI47_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI47_9STRA) HSP 1 Score: 607 bits (1565), Expect = 9.400e-204 Identity = 335/699 (47.93%), Postives = 439/699 (62.80%), Query Frame = 1
Query: 37 KAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDT-----KGVLAACDHVREELLPGVGVRLEDK-GDQAVWKLEDPAVLARERQQREQEQLRRLEAK----AETKRKAAEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYN 1995
K PTW P+P+ L E +R YPLK++NS+TRTKT FVP + RVLWYMCGPTVY +H+GH RTY FD +RR++ D+FGY V L MNITDIDDKII R E G + L+ +FE+ +M DMA L ++ PTV+TRVSE++PE+VE++QGII NGYAYESNGSVYF+ +F KG Y KL+PE VG EL+ EGEG+LS+GA DKR++ DFALWK+S++GEP W SPWG+GRPGWHIECS MAS + + G +DIH+GGVDL+FPHHDNE+AQ+EA ++ QW+NYF+HTGHL+I+G KMSKSLKNF+ I +AL+ N TP Q+R LFLLHKYNTPMDY D+ M A+ + FS+FF NVKA LR T + E AL S+ +AK++V + L DD DTP A+ LQEL K++N+Y+ A + V+ VR AAEY+T + +VFGL +GF G AG ++E L PVLD+ ++FRD+VR D K ++ CD VR+ LP GVRLED+ G ++VWKL D L +E +Q+E E+ + AK AE RK AE+ R +I S+ F+ A Y F++ G+PTH A GEP+ K KK+ KE + KLY+
Sbjct: 6 KKTQPTWYMPQPMNS--LMEYWERHYPLKLYNSMTRTKTTFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYQVELVMNITDIDDKIIVRGAENGWTEAHPGQSLPANKDEAAKVVLQWASEQTAESNMKRAENLSKYFEKTFMDDMAALNIKPPTVLTRVSEYMPEIVEFVQGIIANGYAYESNGSVYFDTIAFGAAKGMNYGKLVPENVGQSELLEEGEGSLSVGASDKRNASDFALWKKSKKGEPFWASPWGEGRPGWHIECSAMASDALKHLEGGRIDIHTGGVDLRFPHHDNEIAQSEAYFNFGQWINYFIHTGHLNIEGLKMSKSLKNFVKINEALKHN-TPR---------QLRFLFLLHKYNTPMDYNDNTMDEAVGVDAFFSKFFQNVKAVLRETGIERSQKWSAAEKALGKSVLDAKEKVHQALADDLDTPRALRLLQELAKDVNRYLAASDAP----VSMAVRAAAEYITHMLRVFGLVPHATDIGFPLDGAAG-----------GNQEETLAPVLDIFTDFRDEVRAILFNNDPNVDVKKALMTLCDSVRDTKLPHAGVRLEDRTGGKSVWKLADKDELLKEIRQKEDEKAAKEVAKQQRLAEEARKLAEERERAQIHPSDLFKS------SAEYGAFNEAGLPTHMANGEPVAKSLSKKLAKEQDKHQKLYD 671
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: H3H2X5_PHYRM (Cysteine--tRNA ligase n=24 Tax=Phytophthora TaxID=4783 RepID=H3H2X5_PHYRM) HSP 1 Score: 607 bits (1565), Expect = 1.360e-203 Identity = 334/702 (47.58%), Postives = 437/702 (62.25%), Query Frame = 1
Query: 49 PTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAK-ERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKG---------VLAACDHVREELLPGVGVRLEDKG-DQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKA-------AEKEARKKIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVK--DKKVKKEWEAQNKLY 1992
PTW PPRP+ GLTE D YPL+++NS+TRTK FVP RVLWYMCGPTVY +H+GH RTY FD +RR++ +FFG +V L MNITD+DDKII RA E G + REL+ +E+ ++ DMA L ++ PTV+TRVSE++PEVVE+++GII NG+AYESNGSVYF+ +F G KG AY KLLPE VG EL+AEGEGALS G DKR++ DFALWK+S+ GEP W SPWG+GRPGWHIECS MAS + + G +D+HSGG+DL+FPHHDNE+AQ+EA +D QWVNYF+HTGHL+I+G KMSKSLKNF+ I++AL +NS Q+R LFLLHKYN PMDY D++M A+ +R F+EFF NVKA LR + E AL +L + K++V + L DD +TP A+ LQ+L K +N+Y+ E+ ++ C AEY+T+I VFGL + +GF +A G D +E +L PVLD+ ++FRD++R R+ G +L CD VR+E LP GVRLED+ AVWKL + L E ++++QE+L+ AEK KI SE F G+K + Y++FDDNG+PTHDAAGEP+ K KK+ KE Q LY
Sbjct: 13 PTWYPPRPIE--GLTEYWDTHYPLRLYNSMTRTKNAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEEFFGMEVELVMNITDVDDKIILRAAETGWLETHPGKELPKDKDEKTKLVMQWAAQQPAEDNMRRTRELSKFWEKSFLDDMASLNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAYESNGSVYFDTAAFGGSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWSSPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALLDNSPR----------QLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFTEFFANVKARLRELGVEKTQKWTPVEKALHGALLDCKEKVFRALSDDINTPLALLHLQQLSKEVNRYMAGDIEKQASMLIRSC----AEYITRILSVFGLVTSATDIGFPLSSNAAGGAD---------QETVLTPVLDIFAQFRDEIREAARSAAADGGDVNALANAILGLCDVVRDEKLPYAGVRLEDRSAGAAVWKLANKDELIEEIEKKKQEKLKXXXXXXXXXXXXXXXXXXLAEKA---KIKPSEMFLGMKDK-----YSKFDDNGLPTHDAAGEPLSKGQSKKLAKEQAKQKALY 681
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A8K1FMX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMX3_PYTOL) HSP 1 Score: 605 bits (1559), Expect = 1.080e-202 Identity = 338/712 (47.47%), Postives = 438/712 (61.52%), Query Frame = 1
Query: 49 PTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG-------------------------------QNYR---ELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNG--ELMAEGEGALS-LGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGF--SQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKG--------VLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARK---------------KIPASEYFQGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLY 1992
PTW PPRP+ + E ++ YPL+++NSLTRTKT FVP RVLWYMCGPTVY +H+GH RTY FD +RR++ D+FGY+V L MNITDIDDKII RA E G +N R ELA +E+ ++ DM LL ++ P V+TRVSE++ E+VE+++GII NGYAYESNGSVYF+V +F +G AY KL+PE VG EL+AEGEG+LS LG DKR+ DFALWK+S++GEP W SPWG+GRPGWHIECS MAS + + +G +DIHSGG+DL+FPHHDNE+AQ+EA ++ QWVNYF+HTGHL+I+G KMSKSLKNF+ I++AL +N++ Q+R LFLLHKYN PMDY D++M A+ +R FS FF NVKA LR P + + E L ++ E K++V + L DD +TP A+ LQ+L K +N+Y+ V+ +R AAEY+T+I VFGL + G +GF S GD G AS+E +L PVLD+ S+FRD++R RAG T G +L CD VR+E LP GVRLED + WKL D L RE +E KAE KR+ KI E F G K + Y++FDD+G+PTHDAAGEP+ K KK+ KE Q LY
Sbjct: 12 PTWYPPRPVDT--MLEYWEKHYPLRLYNSLTRTKTAFVPMKGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGYEVELVMNITDIDDKIIIRAAENGWVDAHPGQELPANKEERTQVVMQWASEQPAEENMRRTKELAKFWEKSFLDDMQLLNIKTPAVLTRVSEYVDEIVEFVEGIIRNGYAYESNGSVYFDVNAFSQTRGMAYGKLVPENVGQSGSELLAEGEGSLSSLGKSDKRNPSDFALWKKSKKGEPYWQSPWGEGRPGWHIECSAMASDAIKHLAEGKIDIHSGGIDLRFPHHDNEIAQSEAYFNFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDNTSR----------QLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFSNFFQNVKAKLRELGVEKPQKWTDVEKKLNGAVLECKEKVHQALADDLNTPFAILHLQQLAKEVNRYLATDLEH----VSMIIRSAAEYITRILGVFGLTTNGSDIGFPLSTSGD-----------GAASQETVLAPVLDIFSKFRDEIREAARAGVTSGNVKDLANAILKLCDDVRDEKLPLAGVRLEDGSGSSTWKLADKDELLRE-----------MEKKAEEKRRKXXXXXXXXXXXXXXXXXXXXXAKIKPEEMFLGEKDK-----YSKFDDSGIPTHDAAGEPLSKGQIKKLSKEHAKQKALY 680
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA) HSP 1 Score: 603 bits (1556), Expect = 1.190e-202 Identity = 351/675 (52.00%), Postives = 426/675 (63.11%), Query Frame = 1
Query: 31 CKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNR-VLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEGEGALSLG-AGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATF---------EGMGDGT-MDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSTPXXXXXXXVVDQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSEAKKEVKKCLCDDFDTPGAMGALQELVKNMNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGVGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDK-GDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFQGLKGED-GKALYTQFDDN-GVPTHDAAGEPIVK--DKKVKKEWEAQNKLYNNAL 2004
C + MP W P P E + L V NS+TR K RFV D +R V WYMCGPTVYAPSHMGHARTYL FDI+RR+++ FGYDV+L MN+TDIDDKII RANE L+ FE ++ +DMA LGVR P V+TRV+E+I ++V YI+ I+D AYESNGSVYF+V F G +Y KL PE + N EL+AEGEG L+ A DK S DFALWK+S+ GEPSW SPWG GRPGWHIECSVMAS F E G+ MDIHSGGVDLKFPHHDNEMAQAEA C QWVNYF+H GHLHIKGFKMSKSLKNFITI+ AL+ N+ QIRL FLLHKYN PMDYGD+ MS +L E+ F EFFHNVKA LR + R E L ++LS+ K V L DDFDTP ++ AL +LVK N Y+++ V +R AA Y+T IF++FGL S GG+ +G GG G A E L PVLD L +FR VR R DT GVL+ CD R+++LP +G+RLEDK G ++VWKL DP L +ER+QRE E + A+K+A K+ E+ + L +D G + Y++FDD GVPTH GE + K KK KKE+E Q K Y L
Sbjct: 5 CSPSIMPHWHNPTP-------ENVTHDVGLMVMNSMTRKKERFVTIDGSRSVKWYMCGPTVYAPSHMGHARTYLGFDIIRRILSSHFGYDVTLVMNVTDIDDKIIQRANEQNIECDTLSKQFEAEFHEDMANLGVRPPDVLTRVTEYIDDIVTYIKTIVDKKMAYESNGSVYFDVNEFSNADGMSYCKLEPEQINNAELLAEGEGKLTQDFATDKHSPRDFALWKKSKPGEPSWDSPWGPGRPGWHIECSVMASDIFSQLSGLPSAEDCGNACRMDIHSGGVDLKFPHHDNEMAQAEAHSGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTAR----------QIRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRIFGLIPD------SAGGE--IGFPIGGAGDAADLEEALTPVLDSLMQFRASVRDFARVKDTGGVLSECDKFRDDVLPVLGIRLEDKTGGKSVWKLADPNELMKEREQRELEXXXXXXXXXXXXXEKAKKDALNKLSPEEFMKQLTLDDNGLSKYSKFDDTTGVPTHLHDGEQLTKGQQKKAKKEFEGQRKKYEKYL 654 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig106.1050.1 >prot_Ecto-sp6_S_contig106.1050.1 ID=prot_Ecto-sp6_S_contig106.1050.1|Name=mRNA_Ecto-sp6_S_contig106.1050.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=674bp MATCGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKback to top mRNA from alignment at Ecto-sp6_S_contig106:282302..296806- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig106.1050.1 ID=mRNA_Ecto-sp6_S_contig106.1050.1|Name=mRNA_Ecto-sp6_S_contig106.1050.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14505bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:282302..296806- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig106:282302..296806- >mRNA_Ecto-sp6_S_contig106.1050.1 ID=mRNA_Ecto-sp6_S_contig106.1050.1|Name=mRNA_Ecto-sp6_S_contig106.1050.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2022bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:282302..296806- (Ectocarpus species6 EcLAC_371)back to top |