mRNA_Ecto-sp6_S_contig106.1032.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI) HSP 1 Score: 299 bits (766), Expect = 8.740e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA) HSP 1 Score: 266 bits (679), Expect = 9.770e-84 Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
M+YLL HL +GWAVDQAI+ EEER V +RFGHD+D TCMQMDEVL+GIAEDVKNF IYVVD+S+VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA) HSP 1 Score: 266 bits (679), Expect = 1.520e-83 Identity = 121/146 (82.88%), Postives = 137/146 (93.84%), Query Frame = 3
Query: 156 APNSMSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
A ++MSYLLPHLR+GWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA+DVKNFC+IY+VD+SEVPDF MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 10 ACSAMSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 155
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM) HSP 1 Score: 265 bits (677), Expect = 1.950e-83 Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL G+AEDVKNF AIYVVD++EVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK EM+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct: 1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSEMVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA) HSP 1 Score: 262 bits (670), Expect = 2.240e-82 Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
MSYLLPHL+TGW+VDQAI+NEE+RVV RFGHD+D CMQMDEVL GI +DVKNF IYV+D+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQEMIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA) HSP 1 Score: 265 bits (676), Expect = 5.060e-82 Identity = 122/148 (82.43%), Postives = 137/148 (92.57%), Query Frame = 3
Query: 156 APNS--MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
AP+S MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL+G+AEDVKNF +YVVD+++VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 81 APHSGAMSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 228
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI) HSP 1 Score: 260 bits (665), Expect = 1.210e-81 Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
MSYLLPHL +GWAVDQAI+NEE+RVV +RFGHD D TCMQMDE+L IA+DVKNF IY VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct: 1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA) HSP 1 Score: 254 bits (650), Expect = 2.120e-79 Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
MSYL+PHL TGWAVDQAI++EE+RVV LRFGHD+D TCMQMDEVL GIAE VKN+ IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA +KQEMIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQEMIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A482V1I6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1I6_9ARCH) HSP 1 Score: 254 bits (649), Expect = 2.980e-79 Identity = 115/142 (80.99%), Postives = 130/142 (91.55%), Query Frame = 3
Query: 168 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
MSYLLPHL +GWAVDQAI+NEE +VV +RFGHD D TCM+MDEVL +AEDVKNF IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIM+D+GTGNNNKI+WA NNKQE+IDI+E VYRGA+KGRGLV+SPKDYSTKYKY
Sbjct: 1 MSYLLPHLHSGWAVDQAILNEENKVVVIRFGHDWDPTCMEMDEVLFHLAEDVKNFAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMVDMGTGNNNKINWALNNKQELIDIIETVYRGAKKGRGLVISPKDYSTKYKY 142
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Match: A0A3R6ZPY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPY4_9STRA) HSP 1 Score: 261 bits (668), Expect = 6.470e-79 Identity = 119/143 (83.22%), Postives = 133/143 (93.01%), Query Frame = 3
Query: 165 SMSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 593
+MSY+LPHL TGWAVDQAI++E ERVV +RFGHDHD CMQMDEVL GIAEDVKNF +YVVD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNK+EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 224 AMSYMLPHLCTGWAVDQAIMSEGERVVVMRFGHDHDPVCMQMDEVLCGIAEDVKNFAVVYVVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKKEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 366 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig106.1032.1 >prot_Ecto-sp6_S_contig106.1032.1 ID=prot_Ecto-sp6_S_contig106.1032.1|Name=mRNA_Ecto-sp6_S_contig106.1032.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=143bp MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEback to top mRNA from alignment at Ecto-sp6_S_contig106:114928..120084+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig106.1032.1 ID=mRNA_Ecto-sp6_S_contig106.1032.1|Name=mRNA_Ecto-sp6_S_contig106.1032.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5157bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:114928..120084+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig106:114928..120084+ >mRNA_Ecto-sp6_S_contig106.1032.1 ID=mRNA_Ecto-sp6_S_contig106.1032.1|Name=mRNA_Ecto-sp6_S_contig106.1032.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=429bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:114928..120084+ (Ectocarpus species6 EcLAC_371)back to top |