mRNA_Ecto-sp6_S_contig106.1027.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A6H5JL08_9PHAE (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL08_9PHAE) HSP 1 Score: 1051 bits (2719), Expect = 0.000e+0 Identity = 571/633 (90.21%), Postives = 577/633 (91.15%), Query Frame = 1
Query: 1 MNIGVHSNGQGAMDV--GPQGGGGERAGSEKDRRAAINMLPNADLSNHTCDSCSKDITGLCYIRCEECKQEVDLCAACFFAGMEPLGHKKTHRYRVMDKLDKPIFTEDWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYEPSWQALAEKQXXXXXXXXXXXXXXXXXSANGLGAAAANGTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQ-NRSNTKQRRRRADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTGDRNRRYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHRDFEVSGAAANAIPGSPPA 1890
MNI VHSNGQGAMDV GPQGGGGERAGSEKDRRAAINMLPNADLSNHTCDSCSKDITGLCYIRCEECKQEVDLCAACFFAGMEPLGHKKTH YRVMDKLDKPIFTEDWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPP +LKHRPDGSGAD+VPIPLTHPANCPPNQRGVKV E T PR YEPSWQALAEKQ XXXXXXXXXXXXXXXX G G AAA+GT G P SATGQ NRSNTKQRRR+ADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKR REDRELVARLRPFARFS+AKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKG+TGDRNRRYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFST GWVTEKHRDFEVSGAAANAIPGSPPA
Sbjct: 1 MNINVHSNGQGAMDVNVGPQGGGGERAGSEKDRRAAINMLPNADLSNHTCDSCSKDITGLCYIRCEECKQEVDLCAACFFAGMEPLGHKKTHSYRVMDKLDKPIFTEDWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPYYLKHRPDGSGADKVPIPLTHPANCPPNQRGVKVGRVEPGVDHRRASQTTPRL-YEPSWQALAEKQQXXXXXXXXXXXXXXXXX--GSGTAAADGTTGTPNGVGGGAVGFPCAGNGAVGGDGAGSATGQQNRSNTKQRRRKADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRSREDRELVARLRPFARFSSAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGNTGDRNRRYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTCGWVTEKHRDFEVSGAAANAIPGSPPA 630
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: D7FRV7_ECTSI (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV7_ECTSI) HSP 1 Score: 649 bits (1675), Expect = 8.560e-226 Identity = 388/630 (61.59%), Postives = 451/630 (71.59%), Query Frame = 1
Query: 109 MLPNADLSNH-TCDSCSKDITGLCYIRCEECKQEVDLCAACFFAGMEPLGHKKTHRYRVMDKLDKPIFTEDWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYEPSWQALAEKQXXXXXXXXXXXXXXXXXSANGLGAAAAN--GTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQNRSNTKQRRRRADKV------------------------------NKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGS---KKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTG---------DRNRRYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHRDFEVSGAAA 1863
MLP AD ++ TCDSC+KDI LCYIRC ECK VDLC +CFF+G EP HKKTH YRVMDKL KPI++E W+A EEL+L D +K GLGAWEEI+D K+FYRR S ELNARYLDTYL+ Y SVLPP +L+ R DG+ ++VPIP THP C P+QRGVK+ SKE+R RTIAELGTNPRYRYEPSWQALA+KQ +A AA+ N G+ G P XXXXXXXXXXXXXXXXXXXXXXX +K KEEER I+EW +KLPGADLSV+ PLRGDFDHEHD+ AEELLANMEFRPTDHASE+QLKLDVIAVYNHRLDEREKRK+FVIE+NLLDYKK + +KR ++DREL+A+LRP ARFS +H+ELIDNL+ AKK+R RIE LQ+YRQNGITT+AEG EF+ A+++RQEELAS+KHRESASYLY+G ST DRN R +R K GG DG G+ N +NLLD+ GAPGVEYLSPAER LCSQLHLLPGYYLVIKNAMIQEC ++GCLKK L LA LD PRL+KMYDFFST GWVT+K DF +G+++
Sbjct: 1 MLPQADPTDGMTCDSCNKDIKFLCYIRCAECKDVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWSAVEELALADLTRKRGLGAWEEIADLKMFYRRKSEKELNARYLDTYLATYDSVLPPHYLREREDGT-VEKVPIPPTHPERCRPSQRGVKLDSKEVRSRTIAELGTNPRYRYEPSWQALAKKQEMAKV------------AARAAAAASGNVEGSDGTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQSKVKEEERLIKEWADKLPGADLSVFLPLRGDFDHEHDNAAEELLANMEFRPTDHASERQLKLDVIAVYNHRLDEREKRKRFVIEHNLLDYKKQQQNNSAGRKRHKDDRELIAKLRPLARFSTPADHEELIDNLLLAKKMRMRIEQLQVYRQNGITTLAEGAEFEIAKKKRQEELASKKHRESASYLYEGVGQGGSSTSSKANIRNIRDRNYRCSNRQKDGG-GDGGGE--ANNDNLLDISGAPGVEYLSPAERVLCSQLHLLPGYYLVIKNAMIQECARAGCLKKKRLPDLAVLDTPRLNKMYDFFSTLGWVTDKATDFTPNGSSS 614
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A7S2H024_9STRA (Transcriptional adapter n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H024_9STRA) HSP 1 Score: 256 bits (654), Expect = 9.460e-74 Identity = 198/615 (32.20%), Postives = 294/615 (47.80%), Query Frame = 1
Query: 100 AINMLPNADLSNHTCDSCSKDITGL----CYIRCEECKQEVDLCAACFFAGMEPLGHKKTHRYRVMDKLDK-PIFTEDWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYEPSWQALAEKQXXXXXXXXXXXXXXXXXSANGLGAAAANGTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQNRSNTKQRRRRADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYD-GH-ASAKGSTG-----------------DRNRRYKDRNKGGGMSD----GNGDDGRNGN-NLLD------VEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHRD 1839
A + + D TC +C + + GL I C EC +LC CF +G E H+ THRYRV D IF +DW+AAEEL+L+D ++K G+G W++++D + YLD YL +G++LPP LK ++VP E Y+ + LA+ ++ G+AA + G + K R R V + I+E KLPGA L+ Y PLRGDFD EH++ AE +LA+MEF P + A+E+ LKL V+ +YN +LDERE+RK+FV E LLDYKK ++R +++R+L+ R+R FARF +A+EH+ + L+ AK++R RI+ LQ YRQ GI T+ EG E++ R++R E+A ++ ++ YL D H A A+ S G DRNR+ +R SD G+ DG + N N D + APG + LS E LC L LLP YY V+K+A+++E ++ G L L + + ++++DFF + GW+T D
Sbjct: 10 AYTLATSLDAHGTTCSNCRRGLGGLGGQGASIVCAECPN-FELCLHCFSSGAEVSPHRNTHRYRVRDNPHAHKIFRDDWSAAEELALLDAIEKHGVGNWKDVADQ---VGSKTERRCEEHYLDDYLGVHGAILPPITLKRNKSTDELEQVPTD------------------------DFLEDSERAEYKKRKYDEKLAQDTKKTTESDEK--------TSETKGSAATGNVV--------------------KMGLLADPRPGVVYAREKLRDRPKASV-------QHIQEKISKLPGASLTGYMPLRGDFDVEHENDAEVILADMEFSPMESAAERGLKLAVLQIYNAKLDERERRKRFVTERGLLDYKKQQNCDRRRPKDERDLIGRMRLFARFHSAEEHENFLQGLLTAKRLRKRIQQLQHYRQMGIRTLKEGEEYESPRRKRHAEMALRRDQQRNGYLLDRSHDARAQHSRGRRRRESNHDSAQEKPEDDRNRKVINR------SDKVVVGSSGDGTSANVNGSDEATAGAIRKAPGADLLSDGELELCVSLGLLPKYYAVVKDALLRESMRLGYLTPKRAHQLVKVQVTKTERLFDFFVSCGWITAASGD 555
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A024G4W7_9STRA (Transcriptional adapter n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4W7_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.080e-69 Identity = 196/622 (31.51%), Postives = 283/622 (45.50%), Query Frame = 1
Query: 142 CDSCSKDITGLCYIRCEECKQE-------VDLCAACFFAGMEPLGHKKTHRYRVMDKLDKPIFTE----------------------------DWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYEPSWQALAEKQXXXXXXXXXXXXXXXXXSANGLGAAAANGTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQNRSNTKQRRRRADKVNKAKEEEREIREWTEKLP-----GADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTGDRNRRYKDR--------------NKGGGMSDGNGDDGRNGNNLLD---VEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHR 1836
C SC KD++ I C EC ++LC CF G E HKKTH Y V D L P+ + DWTA E+L L+D +K G+G W++I+D + S + A Y++ YLSQ + P L D G+ +V H R + SS E E + P K+ +EE +++R T P G +L+ Y PLRGDFD E+D+ AE +L++MEF D +E+ LKL VI +YN +LDER +RK+FVIE+ LLDYKK ++R +E+RE++A++RPFARF +EH+ELI LI A +++ +I LQ YR+NGI T+AE +++ +++R+ ELA QK R++ASYLYD S DR RY++R NK + + D GR + + V+GAPG L+P E+ LCS+L LLP +YLVIK+ +I+EC + G L + LD + + +YDFF + GWV + R
Sbjct: 42 CVSCHKDLSRTIRITCNECASTSASLPPVIELCVECFAVGSEVAQHKKTHSYNVSDCLAFPLVKDSKRAITLKDSAIEQNNGTKSPFKDIGSTDWTAEEDLLLLDGIKLFGMGNWKDIAD---YIGTKSEKKCEAHYMNAYLSQEDQL--PQFLD---DTCGSQQV----DHVNQS--EHRDARASSVE------EEAPSTP-----------------------------------------------------------------------------------------VKKMKHDQEEGKQVRTNTGTTPVKQMVGTELAGYMPLRGDFDVEYDNDAEVILSDMEFAEDDSPTERALKLKVIEIYNSKLDERVRRKQFVIEHGLLDYKKHLQVERRRPKEEREIIAQMRPFARFHTRQEHEELIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAELYEQEKKKRETELAMQKQRDNASYLYDSTRSTYNGK-DRASRYRERFTGLQDEDVSDTSSNKRSRVDEAGEDAGRGTSKRIATSLVDGAPGAHLLAPTEKELCSKLQLLPKHYLVIKDVLIRECYRMGYLTPDAAQQIVKLDVEKSEDIYDFFVSCGWVQREPR 553
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: F0WRK6_9STRA (Transcriptional adapter n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WRK6_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.200e-69 Identity = 191/614 (31.11%), Postives = 282/614 (45.93%), Query Frame = 1
Query: 142 CDSCSKDITGLCYIRCEECKQE-------VDLCAACFFAGMEPLGHKKTHRYRVMDKLDKPIFTE----------------------------DWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYE-PSWQALAEKQXXXXXXXXXXXXXXXXXSANGLGAAAANGTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQNRSNTKQRRRRADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTG-DRNRRYKDR--------------NKGGGMSDGNGDDGRNGNNLLD---VEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWV 1821
C SC KD++ + I C EC ++LC CF G E HKKTH Y+V D P+ + +WTA E+L L+D +K G+G W++I+D + S + A YL+ YLSQ E +P C Q + V + +E +P E PS K N G+ T G +++ G +L+ Y PLRGDFD E+D+ AE +L++MEF D +E++LKL VI +YN +LDER +RK+FVIE+ LLDYKK ++R +E+RE++A++RPFARF +EH++LI LI A +++ +I LQ YR+NGI T+AE +++ +++R+ ELA QK R+ ASYLYD ++ S G DR RY++R NK D + D+GR + + V+GAPG L+P E+ LCS+L +LP +YLVIK+ +I+EC + G L + LD + + +YDFF + GWV
Sbjct: 40 CVSCHKDLSRMIRITCSECASSSASLPPVIELCVECFAVGSEVAHHKKTHSYKVSDCSAFPLVCDSNRAISSKESVNEQSTATNSPLKEIGSTNWTAEEDLLLLDGIKLFGMGNWKDIAD---YIGTKSEKKCEAHYLNAYLSQ--------------------EDQLPQFIDDTCGSQQVELVVQDE-------SEDAVDPSVEVEAPSTPTKRMK--------------------NYQGSKEVRSTTGTTP--------------------------------------------------------VKQMVGTELAGYMPLRGDFDVEYDNDAEVILSDMEFAEDDTPTERELKLKVIEIYNSKLDERARRKQFVIEHGLLDYKKHQQTERRRPKEEREIIAQMRPFARFHTREEHEDLIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAEMYEQEKKKRETELAMQKQRDDASYLYD--STRTNSNGKDRASRYRERLTGLHDDEGSDTSSNKRPRTGDSSEDNGRGVSKRIATSLVDGAPGAHLLAPTEKELCSKLQILPKHYLVIKDVLIRECYRLGYLTPDTARQIVKLDVEKSEDIYDFFVSCGWV 545
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A8K1CL78_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL78_PYTOL) HSP 1 Score: 244 bits (624), Expect = 6.260e-66 Identity = 185/620 (29.84%), Postives = 279/620 (45.00%), Query Frame = 1
Query: 142 CDSCSKDITGLCYIRCEEC------KQEVDLCAACFFAGMEPLGHKKTHRYRVMDKLDKPIFTE-----------------------------DWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYEPSWQALAEKQXXXXXXXXXXXXXXXXXSANGLGAAAANGTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQNRSNTKQRRRRADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTGDRNRRYKDRNKGGGMSDGNGDDG-----RNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHRDFEVSGAAANAIPGS 1881
C +C KD+T I C EC + ++LC CF G+E GHKKTH+Y V D L P+ E +WTA EEL L++ ++ G+G W++I++ + + YL YLS+ + PD + + LT S+ E T E P E+ G++L+ Y PLRGDFD E+++ AE +LA+MEF DH +E++LKL VI +YN +LDER +RKKFV+E LLDYKK ++R +++RE++A+LRPFARF + KEH+E ++ LI A ++R +I LQ YR+NG+ T+AE +D +++R+ E A QK RESASYLY+ SA+ +G R+R + ++G S+ NG D R+ D++G PG L+P E+ LC +L LLP +YLVIK+A+++EC + G L + + +D + ++Y+FF GWV ++ V+ A P S
Sbjct: 61 CLNCQKDLTRTIRITCAECVHGKTAQPLIELCIECFGVGIELGGHKKTHKYTVSDCLAFPLVREHGAPVVDETTAVTNGAKDASSVVAVPSANEWTADEELLLLEAIEMFGMGNWKDIAEH---VATKNEKKCETHYLGAYLSRTDLLPRFLDEPDSPDDVEMVDASVDLT--------------STSEQTTTTTTEASVLP-----------------------------------------------------------------------------------------------------------ERPSGSELAGYMPLRGDFDVEYENEAELILADMEFSEDDHPTERELKLKVIEIYNAKLDERARRKKFVVERGLLDYKKHQQSERRRPKDEREIIAQLRPFARFQSPKEHEEFVNGLITAMRLRKQILLLQEYRKNGVRTLAEAELYDVEKKKRETEQALQKQRESASYLYE---SARPYSGGRDRASRLASRG---SEANGGDSVDDASRSRAAAFDIDGTPGSHLLTPKEKELCVKLKLLPKHYLVIKDALVRECYRLGYLTEQTAKDIVKIDVNKTGQIYEFFVNCGWVRKEASLTTVAVPTAKPAPSS 550
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A3R7GQ30_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQ30_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.470e-64 Identity = 192/638 (30.09%), Postives = 280/638 (43.89%), Query Frame = 1
Query: 121 ADLSNHTCDSCSKDITGLCYIRCEECKQE--VDLCAACFFAGMEPLGHKKTHRYRVMDKLDKPIFTE---------------------------------DWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPCHLKHRPDGSGADEVPIPLTHPANCPPNQRGVKVSSKEIRGRTIAELGTNPRYRYEPSWQALAEKQXXXXXXXXXXXXXXXXXSANG----LGAAAANGTIGAPXXXXXXXXXXXXXXXXXXXXXXXXSATGQNRSNTKQRRRRADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYD-GHASAKGSTGDRNRRYKDRNKGGGMSDGNGDDGRN---------GNNLL----DVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHRDFEVSGAAANAIP 1875
A + C +C KD+T I C ECK + +LC CF G E HKKTH+Y V D L PI E +WTA EEL L++ ++ G+G W++I++ + + + Y+ YL K++ R I + + + A A+K SA G +GA A N + AP E+ + L+ Y PLRGDFD E+D+ AE ++A+MEF DH SE +LKL VI +YN +L ERE+RK+FV+E LLDYK +KR +E+REL+A++RPFAR +EHD+ ++ +IAA K++ +I LQ YR+NG+ T+AE +D +++R+ + A QK RESASYLY+ G S+ G DR R+++R +G D ++ R G N + V+G PG L+P E+ LCS+L LLP +YLVIK+A+I+EC + G L K +D + +YDFF GWV + VS + P
Sbjct: 55 AAMKTKFCLNCQKDLTRTIRIVCAECKPQPPFELCVECFAVGTELGEHKKTHQYTVSDCLAFPIVQEPQTTAESADDISSAAVGTNAVAMLTPSADVTNAEWTADEELLLLEGIEMFGMGNWKDIAEHVV---TKTDKKCEKHYMTAYLGW-------------------------------------------KDLMPRFIGDDERQEDRYVDDAAAAQADK------------------SAEGKVEMIGAMADNAILRAPPPG-------------------------------------------------------ERSAPSQLAGYMPLRGDFDVEYDNEAEAIIADMEFSENDHPSEHELKLKVIDIYNQKLTEREQRKQFVVERGLLDYKLHQHTERKRPKEERELLAQMRPFARLQAPEEHDQFVEGMIAAMKLKKQILLLQEYRKNGVRTLAEAELYDAEKKKRELDQAIQKQRESASYLYESGRTSSSGR--DRANRWQNREQGAAGGDVGTENSRTRGSSASTAGGLNAITASFSVDGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALIRECYRLGYLTKKMAKDSVQIDVNKTGHLYDFFVKCGWVKSESAATTVSASLKTKSP 571
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A024UKU7_9STRA (Transcriptional adapter n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKU7_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.590e-64 Identity = 130/282 (46.10%), Postives = 193/282 (68.44%), Query Frame = 1
Query: 976 GADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTGDRNRRYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWV 1821
G+ L+ Y PLRGDFD EHD+ AE +LA+MEF DH +E++LKL VIA+YN +LDERE+RKKFVIE+ LLDYKK ++R +++RELV +LRPFARF + +EHD L+ L+AA ++R +I LQ YR++GI T+AE +++ +++R+ + A QK RESASYLY+ +KG++ R+ R+ R + G + G+G+ N L ++GAPG L+P+E+ LC ++ LLP YLVIK A+++E + G L + + +D + +YDFF +GWV
Sbjct: 153 GSALAGYMPLRGDFDVEHDNDAELILADMEFSEDDHPTERELKLKVIAIYNAKLDERERRKKFVIEHQLLDYKKYQQNERRRPKDERELVMQLRPFARFHSKEEHDALVGGLVAAMRLRKQIALLQEYRRHGIRTLAEAELYEQDKRKREVDQALQKSRESASYLYE----SKGNSAKRHSRWLSRGQDGANARGDGNT-PNDKACLALDGAPGAHLLTPSEKELCLKMQLLPKQYLVIKEALVRESFRLGHLDPTAAQKIVKIDATKTGTIYDFFVHAGWV 429
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A1W0A0X6_9STRA (Transcriptional adapter n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0X6_9STRA) HSP 1 Score: 227 bits (578), Expect = 6.760e-64 Identity = 130/286 (45.45%), Postives = 190/286 (66.43%), Query Frame = 1
Query: 964 EKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTGDRNRRYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWV 1821
EK+ GA L+ Y PLRGDFD EHD+ AE +LA+MEF DH +E++LKL VI++YN +LDERE+RKKFVIE+ LLDYKK ++R +E+RE++A++RPFARF + ++HD + LIAA ++R +I LQ YR +GI T+AE F+ +++++ E A QK RESA+YLYD +A G+ RN R+ +R + DG N ++GAPG L+P E+ LC++L LLP YLVIK+ +++E + G L + + +D + ++YDFF +GWV
Sbjct: 150 EKMGGA-LAGYLPLRGDFDVEHDNDAELILADMEFHDDDHPTERELKLKVISIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEEREIIAQVRPFARFHSKEDHDTFVSGLIAAMRLRKQIAQLQEYRMHGIRTLAEAEMFELDKKKKETEQALQKSRESAAYLYDSARNASGNRV-RNSRWLNREQ----------DGEKTNASGIIDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHLDVNTATNMVHIDATKTGQIYDFFVHAGWV 423
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Match: A0A067C7N6_SAPPC (Transcriptional adapter n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C7N6_SAPPC) HSP 1 Score: 226 bits (577), Expect = 8.960e-64 Identity = 136/311 (43.73%), Postives = 201/311 (64.63%), Query Frame = 1
Query: 964 EKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRGREDRELVARLRPFARFSNAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKGSTGDRNR--RYKDRNKGGGMSDGNGDDGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTSGWVTEKHRDFEVSGAAANAIPGSPPA 1890
EK+ GA L+ Y PLRGDFD EH++ AE +LA+MEF DH +E++LKL VIA+YN +LDERE+RKKFVIE+ LLDYKK ++R +E+REL+A++RPFARF + ++HD + L+AA ++R +I LQ YR+ GI T+AE ++ +++R+ E A QK RESA+YLYD S++G T +R R R+ R + DG + + ++D GAPG L+P E+ LC++L LLP YLVIK+ +++E + G L A + +D + ++Y+FF +GWV K + ++ A P PA
Sbjct: 148 EKMGGA-LAGYMPLRGDFDVEHENDAELILADMEFHDDDHPTERELKLKVIAIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEERELIAQVRPFARFHSKEDHDTFVSGLLAAMRLRKQIALLQEYRKRGIRTLAEAEMYELDKKKRETEQALQKSRESAAYLYD---SSRGPTANRQRSSRWLSREQ----------DGESASGIID--GAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHLDAGTAANMIQIDATKTGQIYEFFVHAGWV-RKDGNATLTKLGAAPTPDESPA 441 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig106.1027.1 >prot_Ecto-sp6_S_contig106.1027.1 ID=prot_Ecto-sp6_S_contig106.1027.1|Name=mRNA_Ecto-sp6_S_contig106.1027.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=631bp MNIGVHSNGQGAMDVGPQGGGGERAGSEKDRRAAINMLPNADLSNHTCDSback to top mRNA from alignment at Ecto-sp6_S_contig106:53311..63447+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig106.1027.1 ID=mRNA_Ecto-sp6_S_contig106.1027.1|Name=mRNA_Ecto-sp6_S_contig106.1027.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10137bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:53311..63447+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig106:53311..63447+ >mRNA_Ecto-sp6_S_contig106.1027.1 ID=mRNA_Ecto-sp6_S_contig106.1027.1|Name=mRNA_Ecto-sp6_S_contig106.1027.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1893bp|location=Sequence derived from alignment at Ecto-sp6_S_contig106:53311..63447+ (Ectocarpus species6 EcLAC_371)back to top |