mRNA_Ecto-sp6_S_contig105.999.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI) HSP 1 Score: 1399 bits (3622), Expect = 0.000e+0 Identity = 1070/1180 (90.68%), Postives = 1071/1180 (90.76%), Query Frame = 1
Query: 1747 MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGTTTRLLESPSRPPRLMAVGNNGVAVVGGGVGA----CFSPLVSYPSSHGDRASGGREYPLRSQAHDKFSVTTGSSSAGVGPETAXXXXXXXGGVSKNPMDVEWIPNENAQAGGILPTPSPVTSVASASSAMVQPSANANAMGRPPSPFPPSPGREYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRPGVSKGVYVGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------ESDYDSDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXGAMTPGSGXXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASAPPLPVSATASGGAPPRHGRTLSSGTAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGMAGAGIGXXXXXXXAMERRPPTSPISPRSARRSAEPQQQSPRHRQSHGPVPVVSPRFSRAGQQHQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPRYGRHEMAPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAIPRSPASENFRNSXXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 5232
MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGTTTRLLESPSRPPRLMAVGNNGVAVVGGGVG CFSPLVSYPSSHGDRASGGREYPLRSQAHDKFSVT PSANANAMGRPPSPFPPSPGREYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRPGVSKGVYVGAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ESDYDSDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGV+RPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXX XXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAAS PPLPVSATASGGAPPRHGRTLSSGTAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETG AGAGIG XXXXXXAMERRPPTSPISPRSARRSAEPQQQSPRHRQSHGPVPVVSPRFSRAGQQHQH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPRYGRHEMAPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAIPRSPASENFRNSXXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA
Sbjct: 1 MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGTTTRLLESPSRPPRLMAVGNNGVAVVGGGVGGGVGTCFSPLVSYPSSHGDRASGGREYPLRSQAHDKFSVT--------------------------------------------------------------PSANANAMGRPPSPFPPSPGREYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRPGVSKGVYVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYESDYDSDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVSRPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASQPEARG--PAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXXXXXXXXXXXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASVPPLPVSATASGGAPPRHGRTLSSGTAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGRAGAGIGGXXXXXXAMERRPPTSPISPRSARRSAEPQQQSPRHRQSHGPVPVVSPRFSRAGQQHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPRYGRHEMAPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAIPRSPASENFRNSXXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 1113
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE) HSP 1 Score: 1386 bits (3588), Expect = 0.000e+0 Identity = 1259/1506 (83.60%), Postives = 1261/1506 (83.73%), Query Frame = 1
Query: 802 MRPKIEIDSATGQTSRASAFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RAEGGSYHRSRKAYIQNRGGISSGRESSASPHAAAXXXXXXXXAAARIGEDGVPRPVGSRHVRRFSSAGEFSNGTIGGANAAGLDRYGGDVARDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GGRPPLVRKRSLTVAMDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGTTTRLLESPSRPPRLMAVGNNGVAVVGGGVGACFSPLVSYPSSHGDRASGGREYPLRSQAHDKFSVT-------------------TGSSSAGVGPETAXXXXXXXGGVSKNPMDVEWIPNENAQAGGILPTPSPVTSVASASSAMVQPSANANAMGRPPSPFPPSPGREYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRPGVSKGVYVGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDYDSD-LSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXGAMTPGSGXXX---SGA-LPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASAPPLPVSATASGGAPPRHGRTLSSGTAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGMAGAGIGXXXXXXXAMERRPPTSPISPRSARRSAEPQQQSPRHRQSHGPVPVVSPRFSRAGQQHQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPRYGRHEMAPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAIPRSPASENFRNSXXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 5232
M PKIEIDSATGQTSRASAFS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAEGGSYHRSRKAYIQNRGGISSGRESSASPHAAA AAARIGEDGVPRPVGSRHVRRFSSAGEFSNGTIG ANAAGLD YGGDVARDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX GGRPPLVRKRSLTVAMDADPGGP MCPSPRGRRRSVEGVFDTKDS TSGGGSNPDGTTTRLLESPSRPPRLMAVGN+GVAVVGGGVGACFSPLVSYPSSHGDRA GGREYPLRSQAHD SV T SSSAGVG ETA VSKNPMDVEWIPNENAQAGGILPTPSPVTSVASA AMVQPSANANAMGRPPSPFPPSPGREYRR GGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSA RGVRSRPGVSKGVYVGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQ RVPRDQGIASSPSPSPSMGVARPRGLDNQS REGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWD+VSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXX SGA LPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLN LV IFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETG AGAGIG AMERRPPTSPISPRSAR S EPQQQSPRHRQSH PVPVV X PSSPRYGRHEM PRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX AIPRSPASENFRN XXXXXXXXXXXXXXXXXXXXXX QGMAPEDADARRAAVAARMASNGGVAAWAWGGRA
Sbjct: 1 MCPKIEIDSATGQTSRASAFSAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAEGGSYHRSRKAYIQNRGGISSGRESSASPHAAATTGAVSA-AAARIGEDGVPRPVGSRHVRRFSSAGEFSNGTIGSANAAGLDGYGGDVARDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVFNSYQRQDIASPSVGGGAGGDFTYTPLGXXXXXXXXXXXXXXXXGGRPPLVRKRSLTVAMDADPGGPVMCPSPRGRRRSVEGVFDTKDSCTSGGGSNPDGTTTRLLESPSRPPRLMAVGNSGVAVVGGGVGACFSPLVSYPSSHGDRAGGGREYPLRSQAHDNLSVRVSGHAMAGGGSNVNPVETKTDSSSAGVGLETAAAGAC----VSKNPMDVEWIPNENAQAGGILPTPSPVTSVASAPPAMVQPSANANAMGRPPSPFPPSPGREYRRVGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSATRGVRSRPGVSKGVYVGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQTRVPRDQGIASSPSPSPSMGVARPRGLDNQSSREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAPLPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNDLVKIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGKAGAGIGGGSNGG-AMERRPPTSPISPRSARWSTEPQQQSPRHRQSHAPVPVVXXXXXXXXXXXXXXXRQHPQDTCSSGRALSPPSASPPAGSGVGPSSPRYGRHEMVPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXAYTPPXXXXXXXXXXXXXXXXXXXXS-AIPRSPASENFRNXXXXXXXXXXXXXXXXXXXXXXX--QGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 1497
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.030e-42 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 1
Query: 3760 GPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRR 4068
G GVGSW+ +ED++L LVG+FG KW+QI HMPGRVGKQCRERYLNHLDPSL+ PWT EE+ LL LH ++NN WA+IARQ+PGR DNDVKNRWNL+ RR
Sbjct: 52 GRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.510e-38 Identity = 137/489 (28.02%), Postives = 184/489 (37.63%), Query Frame = 1
Query: 2710 TFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSP--SPSMGVARPRGL--------DNQSPREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXGAMTPGSGXXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHG-PWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASAPP 4143
T F LD LW VV RR +C A+QC YR+ + + R+HYHA C+HVHQ G +KGMRF HHQLEKV+KHQR+H + + + I SS + SP+ A PR + R + E + W+ + L LV G +W ++ ++ T C W +G V P + KG G+WT +ED+RL+ LV + G+KWS ++ H+PGR+ KQCRERYLNHLDPSLR PWTE+EE LL+ L NQWAEI RQ+ GRS NDV+NR+NL+ RR + A+ GS T+ +APP
Sbjct: 112 TPFMLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQNTQRSSIGSSAAKPRSPTTVAAAPRNKRVAAATSGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVG--------VNPDHMV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSGTWTAEEDERLSKLVEVVGMKWSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQRRNKRAQ---------GSPTTTTTAPP 411
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE) HSP 1 Score: 162 bits (409), Expect = 3.540e-36 Identity = 137/492 (27.85%), Postives = 185/492 (37.60%), Query Frame = 1
Query: 2710 TFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEE-------------EPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXGAMTPGSGXXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHG-PWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASAPP 4143
T F LD LW VV RR +C A+QC YR+ + + R+HYHA C+HVHQ G +KGMRF HHQLEKV+KHQR+H + Q G +++ SP+ PR R +S G+ ++ + W+ + L LV G +W ++ ++ T C W +G V P+ + KG G+WT +ED+RL+ LV + G+KWS ++ H+PGR+ KQCRERYLNHLDPSLR PWTE+EE LL+ L NQWAEI RQ+ GRS NDVKNR+NL+ RR + A+ GS T +APP
Sbjct: 855 TPFMLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQNTQTS---SIGSSAAKPRSPTTVATAPRNK-----RVAAASNGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVG--------VNPNHMV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSGTWTAEEDERLSKLVEVVGMKWSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQ---------GSPTITTTAPP 1149
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.510e-35 Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 3766 KGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEK 4086
+G+GSW+ +ED RL ALV + G KW+ ++ MPGRV KQCRERYLNHLDP L+ GPWT EEE++LL L N QWAEI RQ+PGRS NDVKNR+NL+ RR + A K
Sbjct: 18 RGIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRLKRASK 124
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A6H5JLY2_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.230e-30 Identity = 118/452 (26.11%), Postives = 158/452 (34.96%), Query Frame = 1
Query: 2722 LDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEEEP--WSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKW--ALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXGAMTPGSGXXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCR 4065
LD LW V R E C + +C+Y++ T +S R+HYHATC H H+ G K GM FHHHQLEK++KHQR+H R L ++P E + + G + P W+ +E +L LV +G W +S ++ TQC W AL G TV KG G+W ED+R+ +LV IFG +WS +++HMPGR+ KQCRERYLN+LDP LR G W+ EE+ LL L + N +A+IA QI GRS NDVKNRW+ + R
Sbjct: 552 LDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHI---------------------------RTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVGTKTETQCMLHWRFALNGNA----TV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISR 795
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: B8BTP0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTP0_THAPS) HSP 1 Score: 126 bits (316), Expect = 2.720e-30 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 3766 KGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRW 4050
KG GSWT +ED L G G KWS+I+ ++PGR GKQCRERY+NHLDP L+ G W ++EE +L+++H L N+W I++Q+PGRSDNDVKN W
Sbjct: 1 KGRGSWTTEEDTILVEKRGALGKKWSKIAYYLPGRTGKQCRERYVNHLDPELKAGEWNDDEEAILIAMHKHLGNKWTVISKQLPGRSDNDVKNHW 95
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A835YP08_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP08_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.600e-30 Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 3769 GVGSWTKDEDDRLNALVGIFGVKWSQISD----HMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPG 4020
GVGSWT +ED++L ALVG++G KW+Q S HMPGRVGKQCRER+LNHLDP L+ PWTE E+ LL+ LH +L+N WA+IAR IPG
Sbjct: 55 GVGSWTPEEDEKLKALVGVYGSKWAQASLFICLHMPGRVGKQCRERFLNHLDPKLKKTPWTEHEDSLLVELHQQLSNSWADIARHIPG 142
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Match: A0A1E7EVM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM5_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.240e-29 Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 3766 KGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRE 4071
KG GSWT +ED L +G KW++I+ H+PGR GKQCRER++NHLDP L+ G WT++EE +L+++H N+WA I++Q+PGRSDNDVKN W +R+
Sbjct: 30 KGKGSWTAEEDAILREKRRQYGRKWAKIAAHLPGRQGKQCRERFVNHLDPELKKGEWTDDEEAILIAMHELHGNRWANISKQLPGRSDNDVKNHWYSTIQRK 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig105.999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig105.999.1 >prot_Ecto-sp6_S_contig105.999.1 ID=prot_Ecto-sp6_S_contig105.999.1|Name=mRNA_Ecto-sp6_S_contig105.999.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1745bp MHHAGLRMQQQQDGDNNSSKTKRGPPAATAPAPAFAPGRPAAREPADPGSback to top mRNA from alignment at Ecto-sp6_S_contig105:349332..357951- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig105.999.1 ID=mRNA_Ecto-sp6_S_contig105.999.1|Name=mRNA_Ecto-sp6_S_contig105.999.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8620bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:349332..357951- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig105:349332..357951- >mRNA_Ecto-sp6_S_contig105.999.1 ID=mRNA_Ecto-sp6_S_contig105.999.1|Name=mRNA_Ecto-sp6_S_contig105.999.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=5235bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:349332..357951- (Ectocarpus species6 EcLAC_371)back to top |