mRNA_Ecto-sp6_S_contig105.998.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A1V0SLS6_9VIRU (GIY-YIG domain-containing protein n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SLS6_9VIRU) HSP 1 Score: 104 bits (259), Expect = 2.120e-27 Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 KPVVYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHTKT 258
K VYSLNL G+KYVG T N + RMNQHFSGNGAKWTQ+++PVSIN ++ A+ E+ VY M YHG KVRGAG+TK+
Sbjct: 6 KHYVYSLNLANGKKYVGMTANIDRRMNQHFSGNGAKWTQKHEPVSINRISEYKNKSEARQVETEVYYKMKNYHGGGKVRGAGYTKS 91
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A6C0CDR8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CDR8_9ZZZZ) HSP 1 Score: 68.9 bits (167), Expect = 1.220e-12 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 7 VVYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHTKT 258
+Y LNLE G+KYVGKT NF+ RM+QHFSGNG+K T++ KP+ + + + ++KY G DKVRG +T +
Sbjct: 41 TIYKLNLEDGKKYVGKTTNFDRRMDQHFSGNGSKVTKKFKPIDGKTIDEVHGFFSDEVEQGCTEEYINKY-GYDKVRGGYYTNS 123
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A7S2HMZ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMZ1_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.550e-12 Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 1 KPVVYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHT 252
K Y+ +L GG+KYVG T AR+ H SGNGA+ TQ+ KPVS+N T RS AK AE+ YR G VRGAG+T
Sbjct: 78 KAFTYTASLPGGKKYVGYTQKPAARLGAHSSGNGARVTQELKPVSVNITPH-RSIAAAKKAETRTYRAEVAKAGVGSVRGAGNT 160
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A2E5R4A8_9PROT (CCHC-type domain-containing protein n=1 Tax=Pelagibacteraceae bacterium TaxID=2026775 RepID=A0A2E5R4A8_9PROT) HSP 1 Score: 65.1 bits (157), Expect = 3.100e-11 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 10 VYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHTKTT 261
+Y L LE G+KY+GKT + + RM+QHFSG GAK TQ+ KP+ C K + +N+ K HG VRG +T +T
Sbjct: 42 IYKLKLENGKKYIGKTVDIDRRMDQHFSGIGAKVTQKFKPIEGEVIDTCPGYFANKVEQKHTDKNIKK-HGYANVRGGKYTNST 124
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A2E4XLR3_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A2E4XLR3_9ACTN) HSP 1 Score: 61.6 bits (148), Expect = 8.760e-10 Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 7 VVYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHTKT 258
+Y +NL+GG+KYVGKT + + RM+QHFSGNGAK T++ KP++ + + + KY G + VRG +T +
Sbjct: 41 AIYKMNLKGGKKYVGKTTDVDRRMDQHFSGNGAKVTKKFKPINAKVIDEVPGFFSDDVEQEYTEEYIDKY-GYENVRGGMYTNS 123
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A6P1UTC8_9ENTR (GIY-YIG nuclease family protein n=1 Tax=Klebsiella michiganensis TaxID=1134687 RepID=A0A6P1UTC8_9ENTR) HSP 1 Score: 59.3 bits (142), Expect = 1.140e-8 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 10 VYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINH-----TQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHTKT 258
+Y L L YVG T N + RM +HFSG GA+WTQ N P+ + H TQ R E ++ +++ M HG +KVRG +T+T
Sbjct: 85 LYILALSNECFYVGLTANIKKRMEEHFSGRGAEWTQLNTPLRLMHAVNTGTQNAREAEMMESEATVI---MMLQHGINKVRGGYYTQT 169
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A6C0ASW7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ASW7_9ZZZZ) HSP 1 Score: 56.6 bits (135), Expect = 1.150e-7 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 10 VYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQVCRSNETAKAAESIVYRNMSKYHGKDKVRG 240
+Y+L LEGG+ Y+GKTNN + R+ HF+ NG++WT+ KP+ I + N + I + M KY G + VRG
Sbjct: 4 IYTLQLEGGKYYIGKTNNPQFRLESHFNSNGSEWTKLYKPIRILEL---KPNCDDYDEDKITRQYMDKY-GINNVRG 76
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A1M7KT22_9FIRM (GIY-YIG catalytic domain-containing protein n=1 Tax=Halanaerobium congolense TaxID=54121 RepID=A0A1M7KT22_9FIRM) HSP 1 Score: 55.1 bits (131), Expect = 6.860e-7 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 1
Query: 1 KPVVYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSIN--HTQVCRSNETAKAAESIVYRNMSKYHGKDKVRGAGHTK 255
K VY L LE G+ Y+G T N RM HFSG GAKWT++ KP+ I + V R ET + M KY G +RG H +
Sbjct: 103 KGDVYVLKLEEGKYYIGYTENLAQRMESHFSGRGAKWTKEYKPLEIVKVYKGVNRKFET-----ELTELYMKKY-GYRIIRGGDHVR 183
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A6C0JC79_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JC79_9ZZZZ) HSP 1 Score: 51.2 bits (121), Expect = 1.040e-5 Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 10 VYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINH-TQVCRSNETAKAAESIVYRNMSKYHGKDKVRG 240
+Y++ L+ G+ Y+GKTNN + R+ HF+ NG++WT+ KP+ + T C + K I + M KY G + VRG
Sbjct: 4 IYTIQLDKGKYYIGKTNNPQFRLKSHFNSNGSEWTKIYKPLKVLEITPNCDDYDEDK----ITIQYMDKY-GINNVRG 76
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Match: A0A396C6P9_BACFG (GIY-YIG nuclease family protein n=4 Tax=Bacteroides TaxID=816 RepID=A0A396C6P9_BACFG) HSP 1 Score: 51.6 bits (122), Expect = 1.310e-5 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 10 VYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQ--VCRSNETAKAAESIVYRNMSKYHGKDKVRG 240
+Y+L LE G YVGKT + + R N+HF+ NGA WT+ + P+S+ + + S E + E+ M K G KVRG
Sbjct: 7 IYTLALEDGFYYVGKTIDPDRRFNEHFNDNGAVWTKLHPPISVIEKESFLVSSPEEEERWENHQTIKMMKAKGWQKVRG 85 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig105.998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig105.998.1 >prot_Ecto-sp6_S_contig105.998.1 ID=prot_Ecto-sp6_S_contig105.998.1|Name=mRNA_Ecto-sp6_S_contig105.998.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=88bp KPVVYSLNLEGGRKYVGKTNNFEARMNQHFSGNGAKWTQQNKPVSINHTQback to top mRNA from alignment at Ecto-sp6_S_contig105:341546..342367+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig105.998.1 ID=mRNA_Ecto-sp6_S_contig105.998.1|Name=mRNA_Ecto-sp6_S_contig105.998.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=822bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:341546..342367+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig105:341546..342367+ >mRNA_Ecto-sp6_S_contig105.998.1 ID=mRNA_Ecto-sp6_S_contig105.998.1|Name=mRNA_Ecto-sp6_S_contig105.998.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=264bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:341546..342367+ (Ectocarpus species6 EcLAC_371)back to top |