Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 153 |
Hectar predicted targeting category | no signal peptide or anchor |
Exons | 2 |
Ec32 ortholog description | Hypothetical protein |
Ec32 ortholog | Ec-19_004430.1 |
Cds size | 153 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1682348753.4355605-CDS-Ecto-sp6_S_contig105:522165..522252 | 1682348753.4355605-CDS-Ecto-sp6_S_contig105:522165..522252 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig105 522166..522252 - |
1682348753.443265-CDS-Ecto-sp6_S_contig105:522323..522389 | 1682348753.443265-CDS-Ecto-sp6_S_contig105:522323..522389 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig105 522324..522389 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig105.1017.1 >prot_Ecto-sp6_S_contig105.1017.1 ID=prot_Ecto-sp6_S_contig105.1017.1|Name=mRNA_Ecto-sp6_S_contig105.1017.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=51bp
MVAQGFGMAVLPGAKKPDFNKLLTHTAAALPCYHCSIATFARHDEIVVVR * back to topmRNA from alignment at Ecto-sp6_S_contig105:522166..522389- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig105.1017.1 ID=mRNA_Ecto-sp6_S_contig105.1017.1|Name=mRNA_Ecto-sp6_S_contig105.1017.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=224bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:522166..522389- (Ectocarpus species6 EcLAC_371) ATGGTCGCACAGGGATTCGGCATGGCCGTACTGCCGGGGGCCAAGAAGCC
CGACTTCAACAAGCTCGTGAGTGTAGTCCTTACCTCCTGCCTCCCGTTCT
GTCGAAATTTTGGTTTGTGCGCCCGGTATTGCTACAGCTGACACACACGG
CCGCCGCACTCCCCTGCTATCATTGTTCAATCGCGACGTTCGCGAGGCAT
GATGAAATCGTAGTTGTGAGGTGA back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig105:522166..522389- >mRNA_Ecto-sp6_S_contig105.1017.1 ID=mRNA_Ecto-sp6_S_contig105.1017.1|Name=mRNA_Ecto-sp6_S_contig105.1017.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=153bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:522166..522389- (Ectocarpus species6 EcLAC_371) ATGGTCGCACAGGGATTCGGCATGGCCGTACTGCCGGGGGCCAAGAAGCC CGACTTCAACAAGCTCCTGACACACACGGCCGCCGCACTCCCCTGCTATC ATTGTTCAATCGCGACGTTCGCGAGGCATGATGAAATCGTAGTTGTGAGG TGA back to top
|