mRNA_Ecto-sp6_S_contig104.960.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: D7G6P6_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P6_ECTSI) HSP 1 Score: 788 bits (2035), Expect = 9.810e-281 Identity = 468/610 (76.72%), Postives = 469/610 (76.89%), Query Frame = 1
Query: 1 MDFRAGRCSDGSRDPVTICECEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDFGSNEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVHEEVDGRPMGAVTVEQETSDGDSGVPPAVVEAKRTSGVSAQDGAKVSSQEEAPGVGENGVTGKGCHENASDVAAPSSEGTKPMEGDQAAVPGSKKRPREEGGGSGAATPEVDDGASRTGRGRNERLQPKAAIRAAEAAAEKVGGARKPPLKLVCAQPFPLMRGHTAFLTFATAPVSRQLGEAATAEAXXXXXXXXXXXXTHDGVDGSEDGHKASIAGDAESALNLSEGDASGXXXXXXXXXXXGDRMDV*EEGIDGKXXXXXXXXXADKTDDSPGASASDVVPETPDSSSPAGR 1830
MDFRAGRCSDGSRDP TICE ASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEV EG KPMEGDQAA+PGSKKR REEGGGSGAATP VDDGASRTGRGRNERLQPKAAIRAAEAAAEKVGGARKPPLKLVCAQPFPLMRGHTAFLTFATAPVSRQLG AATAEA XXXXXXXXXX T DGVDGSEDGHKA IAGDAE ALN SEGDASGXXXXXXXXX GDRMDV EEGIDGKXXXXXXXXXADKTDDSPGASASDVVPETPDSSSPAGR
Sbjct: 1 MDFRAGRCSDGSRDPATICE--ASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEV-----------------------------------------------------------------------------------------------------------------------------EGIKPMEGDQAALPGSKKRSREEGGGSGAATPGVDDGASRTGRGRNERLQPKAAIRAAEAAAEKVGGARKPPLKLVCAQPFPLMRGHTAFLTFATAPVSRQLGTAATAEATXXXXXXXXXXATSDGVDGSEDGHKAGIAGDAEIALNRSEGDASGXXXXXXXXX--GDRMDVCEEGIDGKXXXXXXXXXADKTDDSPGASASDVVPETPDSSSPAGR 481
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A835ZH22_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH22_9STRA) HSP 1 Score: 309 bits (792), Expect = 7.460e-95 Identity = 145/214 (67.76%), Postives = 173/214 (80.84%), Query Frame = 1
Query: 199 IIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDFGSNEA 840
+IG+P+GS+VFSR+TKG++Y LSPTPELWS VVPNRTQIVQ DQS VIFRLD+KPGDTV+ESGTGSG MSTAIMR IAP+G LH+FEFNE RA RA+ EF +N L LV HRDVC G+GG FG++L+GKADA+FLDLPEPWLAV HA LKP KK+CSYSPC+EQV +TC LR GFHS++T+E R+R E LD+PD+GS+ A
Sbjct: 1 MIGQPYGSKVFSRSTKGFIYVLSPTPELWSTVVPNRTQIVQPSDQSFVIFRLDMKPGDTVIESGTGSGAMSTAIMRAIAPTGHLHTFEFNEARADRARAEFVKNGLASLVTVKHRDVCGREGEGG-FGDQLNGKADAIFLDLPEPWLAVPHAHAALKPNKKVCSYSPCVEQVQRTCTVLREWGFHSLATVELRIRPYQLYEADLDLPDWGSSTA 213
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A7S3XKL8_HETAK (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL8_HETAK) HSP 1 Score: 262 bits (670), Expect = 1.370e-77 Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 1
Query: 199 IIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDFGSNE 837
+IGK +GS+V SR + G+V+ L PTPELW+ + +RTQIVQ D ++V+ RL LKPG V+ESGTGSG MS AIMR IAP+G LH+FEFNE RA +A+EEF++N +G LV HRDVCA G GGFG+ L+GK DAVFLDLP PWLA+ A LK G+ LCSYSPCIEQV+KTC+ LR GFHS++T+E RLR+ + V+ + PDFG ++
Sbjct: 1 MIGKTYGSQVQSRISTGWVFLLKPTPELWTLALDHRTQIVQGSDAALVVLRLHLKPGMVVIESGTGSGAMSYAIMRAIAPTGHLHTFEFNEHRAKQAEEEFKKNRVGHLVTVRHRDVCA-EGAEGGFGDHLNGKVDAVFLDLPAPWLALPRAHAALKAGETLCSYSPCIEQVIKTCDKLRELGFHSITTVENRLRSYDVRPVEFETPDFGDDD 212
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: B7FTZ8_PHATC (tRNA (adenine(58)-N(1))-methyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTZ8_PHATC) HSP 1 Score: 258 bits (660), Expect = 1.460e-77 Identity = 130/236 (55.08%), Postives = 163/236 (69.07%), Query Frame = 1
Query: 85 IRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGY--VYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKA-DAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLR 783
IR GD+VV E + + F K I+ R+G FHH++ IGKPFG ++ SR+ +GY VY L PTPELW+ + +RTQIV + DQS VIF+L LKP TVVESGTGSG MS AI+RTIAP G LH++EFNE RA A+ EF N +G LV H+DVC RGDGG +L ++ D VFLDLPEPWLAV HA +KP +L SYSPC+EQ + E LR GFHS+ T+E+RL+
Sbjct: 1 IRTGDLVVIMESFDNLAFVYAKEGEIFSNRNGNFHHNDFIGKPFGCKIRSRSHRGYGFVYLLKPTPELWARSLNHRTQIVHELDQSQVIFQLHLKPNMTVVESGTGSGAMSHAILRTIAPHGKLHTYEFNEHRADTARHEFANNGVGHLVSVHHKDVCGIRGDGG---FDLPPQSVDGVFLDLPEPWLAVPHAAFVMKPNARLASYSPCVEQTQRMVETLRQSGFHSIKTMEYRLQ 233
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A1V9Z9G2_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9G2_9STRA) HSP 1 Score: 258 bits (660), Expect = 2.340e-76 Identity = 125/252 (49.60%), Postives = 162/252 (64.29%), Query Frame = 1
Query: 79 PLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDFGSN 834
P++ GD+V+ +E + + M+ ++Q RHGAFHH+++IG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S ++F PG VVESGTGSG ++T+ R I PSG +++FEFN RA A+EEF N L + RD C GF E LDGK D VFLDLP PW AV HAK LK G SYSPC+EQV KTC+ALR +GF + TIE RL V + VPDFG+N
Sbjct: 29 PIVEVGDLVILYETHNSVTYAFMEKDAVYQNRHGAFHHNDMIGHRYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAILFNTHCGPGKIVVESGTGSGALTTSFARAIQPSGHVYTFEFNATRAQVAKEEFAANGLNKVATVECRDACEQ-----GFPEHLDGKVDVVFLDLPCPWKAVGHAKRVLKTGGAFASYSPCMEQVQKTCDALRIDGFDRIRTIETRLMTYTARYVSMPVPDFGAN 275
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A7S2WUG9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG9_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.420e-75 Identity = 127/253 (50.20%), Postives = 173/253 (68.38%), Query Frame = 1
Query: 85 IRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRT-TKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDFGSNEA 840
I G +V+ F + + ++ +I + G FHH++IIG+PFGS +S++ T+G++YAL TPELW+ +P+RTQIV + D ++V +L++KPG V+ESGTGSG MS+ + R+++P+G L +FEFNE RA A+EEF++N L LV H DVC G GG G E G ADAVFLDLPEPW+AV HA LKP +++ YSPCIEQVMKT ALR GFHS+ T+E RL++ N E VPDFG + A
Sbjct: 13 IAPGSLVIVFLHHDQLDHIVIQRDSILNNKWGTFHHNDIIGQPFGSIWYSKSSTRGWLYALQATPELWAMALPHRTQIVHELDAAMVTLKLNVKPGFRVIESGTGSGAMSSVLARSLSPTGHLFTFEFNENRADAAREEFKQNNLSHLVTVAHFDVCGKGGTGGFPGVE-SGTADAVFLDLPEPWVAVPHAATALKPNRRIACYSPCIEQVMKTATALRDAGFHSIETVEVRLKSYNVREFPFKVPDFGHSGA 264
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A6G0XQT4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQT4_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.330e-74 Identity = 125/248 (50.40%), Postives = 160/248 (64.52%), Query Frame = 1
Query: 82 LIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDF 825
++ GD+V+ FE I + MK I+Q RHGAFHH+++IG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S +IF+ PG V+ESGTGSG ++TA RT+AP G +++FEFN RA A+EEF N L +V RD C GF + L+GK D VFLDLP PW AV HAK LK SYSPC+EQV KTC+ALR +GF V TIE RL + V L +P F
Sbjct: 15 VVEEGDLVILFETHNSITYAYMKRDEIYQNRHGAFHHNDMIGHKYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFHANGLDSVVTIECRDACEQ-----GFPDNLEGKVDVVFLDLPCPWKAVGHAKQMLKHNGAFASYSPCMEQVQKTCDALRLDGFDRVRTIETRLMPYSTRTVTLPLPSF 257
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A024TN05_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN05_9STRA) HSP 1 Score: 249 bits (635), Expect = 7.270e-73 Identity = 123/248 (49.60%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 82 LIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDF 825
++ GD+V+ FE I + +K I+Q RHGAFHH++IIG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S +IF+ PG V+ESGTGSG ++TA RT+AP G +++FEFN RA A++EF N L +V RD C GF + L GK D VFLDLP PW AV HAK LK SYSPC+EQV +TC+ALR +GF + TIE RL + V L VP F
Sbjct: 28 IVEAGDLVILFETHNSITYTYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRISKGYMYVLSPTPELWSKALRHRTQIVFTLDASSIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKDEFHANGLDSVVTIECRDACEQ-----GFPDHLAGKVDVVFLDLPCPWKAVGHAKKMLKHNGAFASYSPCMEQVQRTCDALRLDGFDRIRTIETRLMPYSARTVHLPVPSF 270
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: W4FYX8_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYX8_9STRA) HSP 1 Score: 248 bits (632), Expect = 2.180e-72 Identity = 126/248 (50.81%), Postives = 158/248 (63.71%), Query Frame = 1
Query: 82 LIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVPDF 825
++ GD+VV FE I + +K I+Q RHGAFHH++IIG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S + F+ PG V+ESGTGSG ++TA RT+AP G +++FEFN RA A+EEF N L +V RD C GF E L GK D VFLDLP PW AV HAK LK SYSPC+EQV +TC+ALR +GF V TIE RL + V L VP F
Sbjct: 27 IVEAGDLVVLFETHNSITYAYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAITFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFIANGLENVVTIECRDACEQ-----GFPEHLAGKVDVVFLDLPCPWKAVGHAKKMLKHHGAFASYSPCMEQVQRTCDALRLDGFDRVRTIETRLMPYSARTVALPVPSF 269
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Match: A0A6U2LHT9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2LHT9_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.950e-72 Identity = 132/257 (51.36%), Postives = 170/257 (66.15%), Query Frame = 1
Query: 64 EASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGK-PFGSRVFSRTTKGY--VYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAAR-GDGGGFGEELDGKA-DAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVQLDVP 819
E S LI+ G +VV FE + + F K ++ ++G F+HD+ I K FGS++ +R +GY V+ L PT ELW+ +P+RTQIV + D S VIF+L+LKP V+ESGTGSG MSTAIMRTIAP G LH++EFN RA A+ EFE N + LV HRDVC D GGF ++ G+A DA+FLDLPEPWLAV HA +KP +LCSYSPC+EQ + AL GFHS+ TIE RLR EV+L++P
Sbjct: 43 ERSKHELIQEGSLVVIFESFDNLSFVYAKKGDVYHNKNGDFYHDDFIDKLRFGSKLRARNHQGYGFVFLLRPTSELWARSLPHRTQIVYELDSSTVIFQLNLKPNMVVLESGTGSGAMSTAIMRTIAPYGMLHTYEFNGMRAEAARVEFERNKISHLVTVHHRDVCGKECADDGGF--DVGGQAADAIFLDLPEPWLAVPHAAFAIKPNCRLCSYSPCVEQAQRCIAALSECGFHSIKTIEVRLRENYVDEVELEMP 297 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.960.1 >prot_Ecto-sp6_S_contig104.960.1 ID=prot_Ecto-sp6_S_contig104.960.1|Name=mRNA_Ecto-sp6_S_contig104.960.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=566bp MDFRAGRCSDGSRDPVTICECEASTAPLIRNGDMVVFFEGREPIGFDRMKback to top mRNA from alignment at Ecto-sp6_S_contig104:417029..422859+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig104.960.1 ID=mRNA_Ecto-sp6_S_contig104.960.1|Name=mRNA_Ecto-sp6_S_contig104.960.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5831bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:417029..422859+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:417029..422859+ >mRNA_Ecto-sp6_S_contig104.960.1 ID=mRNA_Ecto-sp6_S_contig104.960.1|Name=mRNA_Ecto-sp6_S_contig104.960.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1698bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:417029..422859+ (Ectocarpus species6 EcLAC_371)back to top |