mRNA_Ecto-sp6_S_contig104.959.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 2.020e-139 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 3 Query: 39 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV 641 MKIFQALILGMATVAGTVSADADVTDVT+RVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV Sbjct: 1 MKIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV 201
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA) HSP 1 Score: 267 bits (683), Expect = 6.160e-85 Identity = 134/200 (67.00%), Postives = 156/200 (78.00%), Query Frame = 3 Query: 39 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 MK+ L L + V+ ++A V VT V+FD+ I G GRI MGL+G AVPKTVENFR LCTGE G GKVY KPL YKGS+FHR+IPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFP EL H +PG+LSMAN+G +TNGSQFFI TV TPWL+GKHVIFG+V E M++V IEKLGS+SG KV++ DSGE+ Sbjct: 1 MKLCGVLALVLCAVSSVMAA---VDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLE-GMDVVKSIEKLGSQSGRPQAKVKVADSGEI 196
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC) HSP 1 Score: 241 bits (614), Expect = 1.060e-74 Identity = 121/179 (67.60%), Postives = 144/179 (80.45%), Query Frame = 3 Query: 102 ADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 A+ VT++V+FDI++ G +AGRI MGL+G+ VPKTVENFR LCTGE G GK KPLHYKGS FHRVIP FMLQGGDFTHGTGTGGESIYG KF+DE F +L H PG LSMAN+GK+TNGSQFFI TV T WL+GKHV+FG+V E M++V ++E +GS+SG S+ VEI DSGEL Sbjct: 16 AEDPKVTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLE-GMDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S3KS35_EUPCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KS35_EUPCR) HSP 1 Score: 239 bits (611), Expect = 3.530e-74 Identity = 121/205 (59.02%), Postives = 152/205 (74.15%), Query Frame = 3 Query: 24 LHSETMKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 + S T+ IF AL++ AT A+ + +VT++VYFD+S+GG GR+ GLFG VPKTVENFR LCTGE G G +KPLHYKGS FHR+IPQFM QGGDFT+ GTGGESIYG KF+DE F EL H KP +LSMAN+G +TNGSQFFI V TPWL+G+H +FG+V E E+V ++EK+GS++G S++V I DSGEL Sbjct: 1 MKSSTIAIFFALLVAFAT------AEDPIAEVTHKVYFDVSVGGENVGRVVFGLFGGVVPKTVENFRALCTGEKGEGS-NKKPLHYKGSPFHRIIPQFMAQGGDFTNENGTGGESIYGHKFEDENF--ELKHSKPYLLSMANAGPNTNGSQFFITFVVTPWLDGRHTVFGEVLE-GQEIVDQLEKIGSQTGKPSKEVRIVDSGEL 195
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A5C5WTT8_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WTT8_9BACT) HSP 1 Score: 239 bits (610), Expect = 6.090e-74 Identity = 123/195 (63.08%), Postives = 145/195 (74.36%), Query Frame = 3 Query: 54 ALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 A++ V + + +VT++VYFD+SI G EAGRITMGLFG VP+TVENFR LCTGEAG PLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KFDDEAF +H+ PG+LSMAN+G++TNGSQFFI TVPTP LNG+HV+FG+V + M LV +IE LGS+SGA K+ I D GEL Sbjct: 10 AIVSSFGLVGSVEARSPEDGEVTHKVYFDVSIDGKEAGRITMGLFGKDVPQTVENFRALCTGEAGKTDS-GVPLHYKGSVFHRVIPNFMLQGGDFTAGNGTGGESIYGEKFDDEAFT--FVHNMPGILSMANAGRNTNGSQFFITTVPTPHLNGRHVVFGKVID-GMALVKKIESLGSQSGATRAKIVIADCGEL 200
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S4E7D2_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7D2_9STRA) HSP 1 Score: 237 bits (604), Expect = 3.720e-73 Identity = 124/192 (64.58%), Postives = 143/192 (74.48%), Query Frame = 3 Query: 63 LGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 L + + A + + A VTN+V+FDISIGG AGR+ MGL+G+ VPKTVENFR LCTGE G GK KPLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KF DE F EL H GVLSMAN+G TNGSQFFICTV T WL+G+HV+FG V E M++V +EK+GS G ++ VEITDSGEL Sbjct: 4 LALLSAALSAAVAAAEPKVTNKVFFDISIGGAPAGRVVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTRGDGTGGESIYGEKFADENF--ELKHTGAGVLSMANAGPGTNGSQFFICTVKTAWLDGRHVVFGGVLE-GMDVVKAVEKVGSGGGKTTKTVEITDSGEL 191
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A2P6VIM7_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIM7_9CHLO) HSP 1 Score: 236 bits (603), Expect = 9.850e-73 Identity = 124/196 (63.27%), Postives = 144/196 (73.47%), Query Frame = 3 Query: 51 QALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 ++ +L +A SA A +TN+V+FD+ I G AGRI MGLFG VPKTVENFR LCTGE G GK KPLHYKGS FHRVIPQFMLQGGDFTHGTGTGGESIYG KF DE F +L H PG LSMAN+G DTNGSQFFI TV T WL+G+HV+FG+V E +++V ++E GS+SG KV I DSGEL Sbjct: 5 RSALLTLALALFAASAAAKGPAITNKVFFDVEIDGKPAGRIVMGLFGKTVPKTVENFRALCTGEKGVGKS-GKPLHYKGSVFHRVIPQFMLQGGDFTHGTGTGGESIYGEKFADENF--KLKHKGPGYLSMANAGADTNGSQFFITTVKTAWLDGRHVVFGKVIE-GLDVVYKVEAEGSQSGKTKSKVIIADSGEL 196
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S4MYZ1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYZ1_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.080e-72 Identity = 122/200 (61.00%), Postives = 149/200 (74.50%), Query Frame = 3 Query: 39 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 MKI AL + ++ V A+ VT++V+FD++IG AGRITMGLFG+ VPKT ENFR LCTGE G GK KPLHYKGSAFHR+IP FM+QGGDFTHG G GGESIYG KFDDE F +L H+ P LSMANSG +TNGSQFFI TV T WL+G+HV+FG++ E ++V ++E +GS SGA S+ V I+DSGEL Sbjct: 1 MKIIAALSFALLAISTLVKAEEP--KVTSKVFFDVTIGDEAAGRITMGLFGDDVPKTAENFRALCTGEKGEGKA-GKPLHYKGSAFHRIIPNFMIQGGDFTHGNGRGGESIYGAKFDDENF--KLKHEGPMYLSMANSGPNTNGSQFFITTVKTAWLDGRHVVFGKILEGD-DVVKKVEAVGSNSGAPSKTVTISDSGEL 194
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A5J9T8K8_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T8K8_9POAL) HSP 1 Score: 236 bits (602), Expect = 1.690e-72 Identity = 122/201 (60.70%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 36 TMKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638 T+ ++ AL T+A ++A++T+VTN+VYFDI I G AGR+ MGLFG VPKT ENFR LCTGE G GK KPLHYKGSAFHR+IP FM+QGGDFT G G GGESIYG KF DE F ++ H PG+LSMAN+GKDTNGSQFFI TV T WL+GKHV+FG+V M+++ ++E G +SGA KV I DSGEL Sbjct: 20 TLFLWLALAAAALTLAQAKKSNAELTEVTNKVYFDIEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGMGKS-GKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGLKFADENF--KIKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGKHVVFGKVLS-GMDVIYKVEAEGRQSGAPKSKVVIADSGEL 216
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A5B9PD91_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PD91_9BACT) HSP 1 Score: 238 bits (606), Expect = 1.830e-72 Identity = 123/187 (65.78%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 93 SADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV*KSG 653 +ADA VT ++VYFDI I G AGRITMGLFG+ VPKTVENFR LCTGE G GK KPLHYK S FHRVIPQFMLQGGDFT+ GTGGESIYG KF+DE F ++HD PG+LSMAN+G +TNGSQFFI TVPT WLNGKHV+FG+V + M+LV +IE GSR+G S + I D GE+ + G Sbjct: 53 AADAKVT---HKVYFDIEINGKAAGRITMGLFGDDVPKTVENFRALCTGEKGKGKS-GKPLHYKDSIFHRVIPQFMLQGGDFTNANGTGGESIYGEKFNDEKFG--IVHDVPGILSMANAGPNTNGSQFFITTVPTAWLNGKHVVFGRVTD-GMDLVKKIEARGSRTGRTSAIIRIADCGEIKVEDG 232 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.959.1 >prot_Ecto-sp6_S_contig104.959.1 ID=prot_Ecto-sp6_S_contig104.959.1|Name=mRNA_Ecto-sp6_S_contig104.959.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=202bp MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFback to top mRNA from alignment at Ecto-sp6_S_contig104:410910..415207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig104.959.1 ID=mRNA_Ecto-sp6_S_contig104.959.1|Name=mRNA_Ecto-sp6_S_contig104.959.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4298bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:410910..415207- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:410910..415207- >mRNA_Ecto-sp6_S_contig104.959.1 ID=mRNA_Ecto-sp6_S_contig104.959.1|Name=mRNA_Ecto-sp6_S_contig104.959.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:410910..415207- (Ectocarpus species6 EcLAC_371)back to top |