Homology
BLAST of mRNA_Ecto-sp6_S_contig104.955.1 vs. uniprot
Match:
A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)
HSP 1 Score: 830 bits (2145), Expect = 3.770e-301
Identity = 437/513 (85.19%), Postives = 447/513 (87.13%), Query Frame = 1
Query: 1 MVGIAAGRSVEGQNAARLAMTWKDRQRTRVPLVDLDDNPFCVERRTNEEWHMMQLNKNPSLVHLTSADVPRTASFMVDSEKPFREFSRKKRNLLTWSLRAASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKDGGGHKGGSSRKRGRNSKPRRTTGLSAPMLKALLKGDTPTGXXXXXXXXXXXXXXEPLEPNGNSVSRDPTPKPNYLVLGGQEDSTDSFVNSEKLDESMWRSVDDLGRGEALGELELWLQTSSQEGLGHGRRRLGNTKEGLELQRIFSTERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLKKSRKAAAGVPVTASSTKDEREQELRPFNPTPTGRWEVCPATPRAVIARQEIRRLSEMREERDSAMAKKVRQAELGVLFKKIAPSEKLYRNTLQIAQERFRHQGTAA 1539
MVGIAAGRS+EGQNAARLAMTWKDRQRTRVP+VDLDDNPFCVERRTNEEWHMMQLNK KPFREFSRKKRNLL WS+RAASASDAAAQ+TANKTHMPTRRLSTTV SDLDGTDIGE FNME+G+SGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKK GGGH RGRNSKPRRTTGLSAPMLKALL+GDTPTG E EPNGN VSRD PKPNYLVL GQED TDS VNSEKLDES WRSVDDLGRGEALGELE WLQTSS GLGHGRRRLGNTKEG EL RIFS+ERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKL KSRKAAAGVPVTASSTKDERE+ELRPFNPTP GRWEVCPATPRAVIARQEIRRLSE+REERD AMAKKVRQAEL VLFKKIAPSEKLYRNTLQIAQERFRHQGTAA
Sbjct: 1 MVGIAAGRSLEGQNAARLAMTWKDRQRTRVPVVDLDDNPFCVERRTNEEWHMMQLNK-----------------------KPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDGTDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXXXXRGRNSKPRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQQELFEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGELESWLQTSSHSGLGHGRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAA 490
BLAST of mRNA_Ecto-sp6_S_contig104.955.1 vs. uniprot
Match:
A0A8K1C8G0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8G0_PYTOL)
HSP 1 Score: 62.8 bits (151), Expect = 4.340e-7
Identity = 60/214 (28.04%), Postives = 86/214 (40.19%), Query Frame = 1
Query: 22 RSVEGQNAARLA--MTWKDRQRTRVPLVDLDDNPFCVERRTNEEWHMMQLNKNPSLVHLTSADVP--------RTASFMVDSEKPFREFSRKKRNLLTWSLRAASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPS 633
R +NA LA ++ ++R RVP VD+D NPFCVER+ +E+ + NKNP T P +SF+ D+ R +RA + +A + + + PSDL + E+ V V P Y QP++FGHRP SASRM++P T + S G PS
Sbjct: 12 RKFHRENAHLLAPVVSTVHKKRVRVPRVDVDANPFCVERQLADEYALHNFNKNPRFYLNTIKQSPPRIEKNPHNHSSFINDAADMMASSGFSPR------IRAEFTTPSAPSVSYKPMDYVAPSVISVDPSDLRSIPKNHPLSPEKNA----------VHVVSKFTPPTHAYYGSHKTTQPVSFGHRPDSASRMYDPLTSGLTTSRSSTGDGPS 209
BLAST of mRNA_Ecto-sp6_S_contig104.955.1 vs. uniprot
Match:
A0A024UA32_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA32_9STRA)
HSP 1 Score: 57.0 bits (136), Expect = 2.720e-5
Identity = 57/213 (26.76%), Postives = 78/213 (36.62%), Query Frame = 1
Query: 22 RSVEGQNAARLAMTWKDRQRTRVPLVDLDDNPFCVERRTNEEWHMMQLNKNPSL-VHLTSADVPRTASFMVDSEKPFREFSRKKRNLLTWSLRAASASDAAAQATANKTHMPTRRLSTTVPSDLDGTDIGELFNMEQGVSGRVLHPTDRVEVD--VDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHP--STGGI 645
R ++ LA++ ++RTRVP +D DDNPFC +R+ ++ + NKNP L T PRTA P VP + + VS H + + T + P + E V ++PITFGHRP SASR FNP T + P TGGI
Sbjct: 20 RELKAMRKNELALSTLSKKRTRVPKID-DDNPFCTDRQLQDDIALAAFNKNPQLNAKRTPFTTPRTAQ------------------------------------------NPHNHTDIRVPPQRQPHVFHDANSSHVAVSFPAYHASISIAKPYAASTRRSSPPTQHEAV-KKPITFGHRPTSASRHFNPVTSELNASAAFAKKKPLRQTGGI 188
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.955.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 3.77e-301 / Id = 85.19 Expect = 4.34e-7 / Id = 28.04 Expect = 2.72e-5 / Id = 26.76 Sequence A0A6H5K2S4_9PHAE A0A8K1C8G0_PYTOL A0A024UA32_9STRA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 1545 Hectar predicted targeting category other localisation Exons 6 Ec32 ortholog description expressed unknown protein Ec32 ortholog Ec-26_000180.1 Cds size 1545
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348747.4555938-CDS-Ecto-sp6_S_contig104:383652..383752 1682348747.4555938-CDS-Ecto-sp6_S_contig104:383652..383752 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 383653..383752 - 1682348747.4634607-CDS-Ecto-sp6_S_contig104:384434..384601 1682348747.4634607-CDS-Ecto-sp6_S_contig104:384434..384601 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 384435..384601 - 1682348747.4705207-CDS-Ecto-sp6_S_contig104:385084..385255 1682348747.4705207-CDS-Ecto-sp6_S_contig104:385084..385255 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 385085..385255 - 1682348747.4780154-CDS-Ecto-sp6_S_contig104:385779..386646 1682348747.4780154-CDS-Ecto-sp6_S_contig104:385779..386646 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 385780..386646 - 1682348747.4857352-CDS-Ecto-sp6_S_contig104:387401..387470 1682348747.4857352-CDS-Ecto-sp6_S_contig104:387401..387470 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 387402..387470 - 1682348747.4954267-CDS-Ecto-sp6_S_contig104:387954..388125 1682348747.4954267-CDS-Ecto-sp6_S_contig104:387954..388125 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 387955..388125 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.955.1
>prot_Ecto-sp6_S_contig104.955.1 ID=prot_Ecto-sp6_S_contig104.955.1|Name=mRNA_Ecto-sp6_S_contig104.955.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=515bp
MVGIAAGRSVEGQNAARLAMTWKDRQRTRVPLVDLDDNPFCVERRTNEEW back to top mRNA from alignment at Ecto-sp6_S_contig104:383653..388125-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig104.955.1 ID=mRNA_Ecto-sp6_S_contig104.955.1|Name=mRNA_Ecto-sp6_S_contig104.955.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4473bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:383653..388125- (Ectocarpus species6 EcLAC_371)ATGGTGGGAATTGCCGCCGGTCGCTCTGTGGAGGGACAAAACGCCGCCAG
GCTGGCCATGACATGGAAAGATCGGCAACGCACACGGGTTCCCCTGGTTG
ATCTCGACGACAACCCTTTCTGCGTTGAAAGGCGGACGAACGAAGAATGG
CACATGATGCAACTCAACAAG GTTTGCCGAACACAGCCCAATTTGAGAGC
AACAGGTTGCATGAGTGATGTGAAGCCAAAATCCTCGTTTTTTTGTACAT
GTAGATCTACGGCACAGCAAGACAGCAAGGCACAGCGGCAGTAACAAGCA
CGAGCGATCGACACCTCCATCGTCTCTCACCGCGCAACTCTGCGTGACCT
ACAATACTGTATGAAGGAGGCGCTTCAAAGGTAGCGAGGCCTTTTATCCC
CCAGTCTCACGCCAAGTACCTGAAGTCTCGGGGGGATGTCAAGGATCGTT
ATCGTTTGACCGAAGGCCTCGAGTACGTCAACGTCAACGTGCACTCAGGG
AACCAGTTGTACCGCGTTAAATTGCATGCAGGAGCAGCAGCATGCAGGGC
CACGGCCTTGGCAAACGAAACAAATATACATGTTGCCATTTGATTCAGCA
GCGTACTTCAATTACTCGTATGTCCCGAAACTCTGTCCTGCTATTGTACG
CGCAGAACCCATCGTTGGTTCACCTGACTTCAGCAGACGTACCACGGACG
GCCTCTTTTATGGTGGACAGTGAG GTGAGGTACAGCACTAGTCTACAGCA
GGAAATAATCCGAGAATTCATCTATTCTTTCACCCACGTGCAGAAAAACA
AAACAAAACTCTTGTATACGGAACATGATATGGGGTTGCTCAGGCTATGT
TGTACCACATGCCTTCGCTCGGGCATGCGATGCGAGAGTAAGCTACAGCC
GCTGGTTGATGGCAGTGTCCTCTTGATGGCGGTCTCCTTTTGTCTTGCAA
TTCGAGCTACACTTGAATATCTTTACACGACAGCTGTGATGCTCTCTGGG
GCTTTAGACGCCTACCAGCATAGTCTACACCTTCAGCATATGATACCTGC
GCAGCCTGACCACTAACCATGGGCAAAAGTTAATCATTTTATCATGGTCA
GTGTCGACAGCTAATCCATCGGAGCATCAGAGAACACCCAACGCCATCCG
CTAAGAACTACAGTGCGCACGTCGCTATTGTACCACGTACCCAATACACA
AAAGCGGTTGGTACAACTACCACCGGATGGGTGGGAGCTAAGCACGACGG
TGAAACAAAATGGGGTGCATGTGTAGCCGAGGACGCTGGAACAAAGGGGG
TGGGTGGTTGGGTGTTGCCTAGGGCACCTTTGTCCTCTCATCGGTGTTCA
TACCCAACCACATGGGCTGCGCCAAGCAAGTGTGTGGACAGTTGGACGCA
CGAGAAAACCCACGTCACACTCCCGAAATCATCTCCACACCCACTGCTCC
CGTCCCCGTTGCGAACCCCTGGCGCGCAGAAACCTTTCAGAGAATTTTCC
CGGAAAAAACGGAACTTGCTGACCTGGTCTCTTCGCGCCGCCTCCGCCTC
CGACGCGGCAGCTCAAGCAACCGCGAACAAGACCCACATGCCTACACGGC
GTTTGAGCACGACGGTTCCTTCCGACTTGGACGGCACCGACATAGGCGAA
CTTTTCAACATGGAGCAAGGGGTGTCAGGGCGCGTCCTGCACCCCACTGA
TCGTGTGGAAGTAGACGTCGACACACTGCCGACCCTGGAGCCGTACCGGC
GAGAGGTGGTTGCGCAGCAGCCGATTACGTTTGGTCACAGGCCGTTATCT
GCGTCGCGAATGTTCAACCCGTGCACAATGGCAACGTCGTGTGGAATCCC
GAGCGATGGCCACCACCCCAGTACCGGAGGTATTCGCGGAAGGAAAAAGG
ACGGTGGTGGACATAAAGGCGGGTCAAGCCGTAAGCGAGGCCGAAATAGC
AAGCCTCGCCGAACGACCGGTCTCAGCGCACCAATGCTCAAAGCGCTCTT
GAAGGGAGACACTCCGACAGGAGGGGGGGGGGCTGCGTTGGTGACAGCAT
CTCAGCAGCAGCAGGAGCCGCTTGAGCCAAATGGAAACAGCGTGTCTAGA
GACCCGACTCCTAAGCCAAACTACTTGGTGCTTGGCGGGCAAGAGGATTC
AACCGACTCTTTCGTAAATAGCGAAAAATTAGACGAAAGCATGTGGCGAT
CCGTTGACGACCTTGGAAGAGGAGAGGCGCTCGGAGAACTAGAACTGTGG
CTGCAGACCTCGAGCCAGGAGGGGCTGGGACATGGCCGGCGTAGGCTAGG
TAACACGAAGGAGGGGCTGGAGCTACAGCGAATATTCTCTACTGAG GTGA
GAAATCAAACGATTCAAGCGGTGCAGCAGGCGACGTTCCTTGTGCCCCAA
CACTCCTGGAGTATGGTTGCTGAGGTGTGCTTTTCGGAGAGGGCTCTAGC
GACTAGGCTACTATTGGGCTGCAGCTGGTCAGAAAGATGTCCTACACACG
AAACAGTTGTCCCAAACGTTTTGTGGCGACCAGGGCGCATGGTCTTCCAT
GGCACGACGAGCAGGTTTCCGTGGAAATTTTTTCAAGACAATAGTTTCAG
CACGCTGGTGAAAATAACTGCCGAGCCACGAAGAAAGCAAGGAGTCGGTG
CTCGCAAATACATGCATACTCTCTCCTTGTATGTTTTTTGGGGTGACATA
CTTCTTTGCAACACCAAGCGATTTGGGCGCTTGCGGCTGACTGGGGATGA
TTGCCATTGGAATATGTTAGCATGAATGGTTATATGGCTGCTATCTATCC
TGAAACTGCGGCATTTTCCCCTCCTTCCTGCCAATCTTTGTGCCATCTAA
TACCACGGCAACGAGTATAGCGCCCTCCTTGGGACGGAGCACCGGCACCG
TTGCCTGCTCCCCAACATACGAGACGAGCGATCAGCTCGCTATTGATGCC
GGATCCAGACGAAAGGCTGCGGGACAAGCTCAAAAAGTCCAGGAAAGCCG
CCGCGGGTGTGCCGGTCACCGCCTCCAGCACCAAGGACGAG GTGCCACGG
TAGCAGTACACCAGCTTCGGTTTTGTAAGGGAGGTAGACGCAAATAATAG
CGGAATGGCACAAACTGTTCTTGGTCCGACCAGGGATAGCTATTATAGCA
TCTCCCCACCACCTCATCCGTCGACAAAAGTGTACGGAAGAAAGACCCAA
CACCAAAATAGCACAGTTGGCGTTGTCAGGGTCTCGGTTTTGAGGTAGAG
GTAACGCTTGGGAAAACCTAGCCCGAAAATTGAGGTATGTAGCACAGAAA
AAAGGAACAGTAAGGCATCCTTTGCTGCAGCAGATGAGAACCCACCCAGC
ATAGGATCCGAATGATTAAGGCTCCAACGTCAGGGCTGAAGCGCCTCCGT
CCATGCGTTTACAAGCGCGTGCGTGCCGCAACAGCCTCAACTATTTTCGC
ATGACCCATGAGAAAGCGAGGCGATCCCCCTCGCCCCTCGCCGATTCCAC
CTCTCTTGCATTCGTTACCGTTAGAGAGAACAAGAGCTGAGGCCCTTCAA
CCCAACGCCCACTGGACGGTGGGAGGTGTGCCCCGCCACCCCTCGCGCGG
TGATCGCCCGACAAGAGATCAGAAGACTCTCGGAAATGCGGGAGGAGCGG
GATAGTGCCATGGCCAAGAAAGTGCGGCAAGCTGAGTTGGG GTGAGGTTC
ACAACAACACCGACCGAACCGCCCCCCTCTTCTCTAGCGTACGTTTATGA
ACCCGCCGACAACTTCGGGACCTTTTGCTTCGCCATGGGGCCCCCTCCTT
TATCCTCTGCGGGAAAACCAGTGCAGACGATATTGGGTTTAGAGTTGGGT
GAGGTTCAAGGTCTTGACCACCAAGGTGGCGTGTTCAGAAGGTGTAGAAA
ACCGTTGAATAGTTTGTGGCGGGAAAAACATGTGCACCTCTTGCACATCG
AATTGTTGCCTTGCCGGGGATGTTTCGTGCTGTATCGTGGATGACCACAG
GGTTTGCATAGGCGTCGCGCTCATACGTGTTTCTTTGGAATGGAGCAGTG
CCGCACCGTTTTCGTATCACCTGAACCAACTCCAAGTGAAGAGCGCGTTC
ACGCAGAGAAAACGGCCACCATCATTTGTTGACGGCGATGACAGTAACCC
GGACCCCGACAAATCACACACCCATCCTCTGTGTGTGTGTGTGTGTGTGT
GTGTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTGTCTGTCCCTGTCTCTCTGTCTCTGTCTCTCTGTCTCTGT
CTCTGTCTCTCTCTCTCTCCGTCCCTGCCACTTGCTATCGACTGTCCCAT
ATCGGTACGCACGGACCTTGAAGTGTGCTCTTCAAAAAGATCGCCCCGTC
GGAGAAACTTTACCGCAACACGCTTCAAATAGCCCAAGAGAGGTTCCGGC
ACCAGGGTACTGCAGCGACCTAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:383653..388125-
>mRNA_Ecto-sp6_S_contig104.955.1 ID=mRNA_Ecto-sp6_S_contig104.955.1|Name=mRNA_Ecto-sp6_S_contig104.955.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1545bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:383653..388125- (Ectocarpus species6 EcLAC_371) back to top