mRNA_Ecto-sp6_S_contig104.954.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig104.954.1
Unique NamemRNA_Ecto-sp6_S_contig104.954.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI)

HSP 1 Score: 847 bits (2187), Expect = 6.380e-309
Identity = 420/431 (97.45%), Postives = 424/431 (98.38%), Query Frame = 1
Query:   22 MPPRLSSLTSLANGGEAPAHSPTGSRRRPRRPASGTSLHLSDSQQKSSRPSVQRLFLSAADLLAKTTTKCALLTCASGMAWASLIVWILGPAVSSPDTTTQVDQHQQQEVPTLSPAAGAFPIVDEGSLLPGWTPLGHHSRFMGREAFPEQFEHWGEDREVVIHSVDVGPLTDEGDQVLPRTDLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRPAV 1302
            MPPRLSSL SLANGGEAPAHSPTGSRRRPRRPASGTSLHLSDSQQKSSRPSVQRLFLSAADLLAKTTTKCALLTCASGMAWASLIVWILGPAVSSPDTTTQVDQHQQQEVPTLSPA G+FPIVDEGSLLPGWTPLGHHSRFMGREAFPEQFEHWGED+EVVIHS+DVGPLTDEGDQ+LPRTDLLLAILSGDDKAARLKRDTIRELYDKY GWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP    GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRPAV
Sbjct:    1 MPPRLSSLKSLANGGEAPAHSPTGSRRRPRRPASGTSLHLSDSQQKSSRPSVQRLFLSAADLLAKTTTKCALLTCASGMAWASLIVWILGPAVSSPDTTTQVDQHQQQEVPTLSPAGGSFPIVDEGSLLPGWTPLGHHSRFMGREAFPEQFEHWGEDQEVVIHSMDVGPLTDEGDQLLPRTDLLLAILSGDDKAARLKRDTIRELYDKYGGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRPAV 431          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 9.700e-100
Identity = 155/302 (51.32%), Postives = 207/302 (68.54%), Query Frame = 1
Query:  505 IHSVDVGPLTDEGD-QVLPRTDLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVGGERS--QEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVL----RPAVFFHDCKETSELRQCSKRLVRAHLHC 1377
            + SV +G L   G  +  P+ DLLL I SG  +A   KR+ +R++YDKY+GWV VGG  S  + +N E  E    V+FV+++ TAPP+GELVGD+LYV  P+GYRNIV K K M+ LVRH DF FLLKADDD+FVC+ R+A+ LH+   E + K+Y GVPTACN   NP    GRV+K+   +W+D K+V HTL GLDC+P    GAFY+LAQPLVEHLYRG EH + F NEDVT+GSWL+GVDR +  +++  +S LW+C+C    +     +  +FFH+CK  S+L+ C  RL+R  + C
Sbjct:  336 VSSVVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKHMFFHNCKGLSQLKLCGTRLLRPGVGC 637          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 5.550e-99
Identity = 144/270 (53.33%), Postives = 190/270 (70.37%), Query Frame = 1
Query:  598 KAARLKRDTIRELYDKYDGWVTVGGERSQEQ--NEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVL----RPAVFFHDCKETSELRQCSKRLVRAHLHC 1377
            +A   KR+ +R++YDKY+GWV VGG  S  +  N E  E    V+FV+++ TAPP+GELVGD+LYV  P+GYRNIV K K M+ LVRH DF+FLLKADDD+FVC+ R+A+ LH+   E   K+YAGVPTACN   NP    GRV+K+   +W+D K+V HTL GLDC+P    GAFY+LAQPLVEHLYRG EH + F NEDVT+GSWL+GVDR +  +++  +S LW+C+C    +     R  +FFH+CK  S+L+ C  RL+R  + C
Sbjct:   32 QADAAKRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITVKTRRKQMFFHNCKGLSQLKLCGTRLLRPGVGC 301          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA)

HSP 1 Score: 272 bits (695), Expect = 7.640e-84
Identity = 131/282 (46.45%), Postives = 191/282 (67.73%), Query Frame = 1
Query:  544 DQVLPRTDLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVG-GERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRPAVF---------FHDCKETSELRQCS 1347
            D  LP  D+LL + SGD +    +RD +R +Y +Y G V +  G++S+++       +F+++FV  RS AP DG L GD L +NAPDGYRNIV+K K M+ L++H++FK+L+K+DDDTFVCV+++ + LHN PEE+K K+YAGVPT CN P +  V  GRV  D   KWYD+++V HT+  ++CYP    GA Y+L++ LVE LY+GR+H  TFINEDVT+G+WL+GVDR++ ++ D + +RLW C C S      A F         FH+CK+  ++ +C+
Sbjct:  107 DSSLPTYDMLLVVFSGDSEDDAKRRDLMRRIYGRYRGRVVLNRGKKSRKK------YKFKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNMPGHQMV--GRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKCA 380          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 7.700e-75
Identity = 134/290 (46.21%), Postives = 175/290 (60.34%), Query Frame = 1
Query:  502 VIHSVDVGPLTDEGDQVLPRTDLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGS-NFVLRPA----VFFHDCKETSELRQC 1344
            ++   D  P+   GD   P  D LL + SGDD  A  KRD +RE+Y  Y G + +  ER Q          F+V++VV    A   G+L+ DVL+V    GYRNI  K K M+  V+H+ FK+LLK DDDTFVC+ R A+ +H  P   K K+Y G+PTAC+ P NP+  VG+VI D  DKWYD K+++HT+ GLDCYP    GAFY+L+ PLVE L +G     TF NEDVT+G WL GVDRA+  ++D   +R+W C C   NF   P     VFFH+CK   +LR C
Sbjct:  126 ILGRSDDWPVAWPGD-TRPYFDYLLVVFSGDDTDALAKRDYMREMYGTYGGQILITDERGQ-----AFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRPNF--NPGGDANVFFHNCKSMDDLRGC 407          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 5.000e-73
Identity = 128/269 (47.58%), Postives = 167/269 (62.08%), Query Frame = 1
Query:  565 DLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGS-NFVLRPA----VFFHDCKETSELRQC 1344
            D LL + SGDD  A  KRD +R++Y  Y G + +  ER Q          F+V++VV    A   G+L+ DVL+V    GYRNI  K K M+  V+H+ FK+LLKADDDTFVC+ R A+ +H  P   K K+Y G+PTAC+ P NP  +VG+VI D  +KWYD K+++HT+ GLDCYP    GAFY+L+ PLVE L +G     TF NEDVT+G WL GVDRA+  ++D   +R+W C C   NF   P     VFFH CK   +LR C
Sbjct:  186 DYLLVVFSGDDTDALAKRDYMRKMYGTYGGQILITDERGQ-----AFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRPNF--NPGGDANVFFHGCKGMDDLRGC 447          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA)

HSP 1 Score: 233 bits (594), Expect = 5.690e-71
Identity = 109/221 (49.32%), Postives = 148/221 (66.97%), Query Frame = 1
Query:  715 FQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSN---FVLRPAVFFHDCKETSELRQCSKRL 1356
             QV+F+V+   A  +G+LVGD+LYV  P GYRNIV K K M+ +V H + K+L+K+DDDTFVC+ R+A  +   P   K+K+YAG+PTAC   +NP +  GRVIKD   KW+D KFV HTL GLDCYP    GAFY+L++PLV++L++GR    TF NEDVT+GSWL+GVDR +   +    +RLW C C             FFH+CK   +L++C++ L
Sbjct:    1 MQVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLESNPHI--GRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTCAKYTKWLKYDTNAFFHNCKSLDQLQKCAEFL 219          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA)

HSP 1 Score: 216 bits (550), Expect = 9.680e-63
Identity = 123/328 (37.50%), Postives = 172/328 (52.44%), Query Frame = 1
Query:  550 VLPRTDLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP--------------------------------------------------------GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFV-LR--PAVFFHDCKETSELRQCSKRL 1356
            V P  D +L I SGD + A  KR+ +R  Y  Y   + V     Q+ N  + +   +V+F+V+   AP DG L GDVLYV  P+GYRNIV K K M+ +V H +FK+L+K+DDDT VC+ ++A  +   P   +D++YAGVPTAC   A+     GR+I+D   KW+D KFV HTL GLDCYP                                                        GAFY+L+QPLV HL+RGR     F NEDVTVG+W++ ++R +  +    ++ LW+C C +    LR  P VF H+CK  ++L+ C+  L
Sbjct:   25 VTPYFDFVLTIFSGDSEQAAEKREQLRTSYSAYSKGLHV-----QDANGLSHDYTVKVLFLVSHPDAPEDGLLDGDVLYVRCPEGYRNIVLKTKAMLSVVAHFNFKYLMKSDDDTVVCLNKVAKRMAVLPPAVQDRVYAGVPTACGLEAHSDS--GRIIRDPTHKWHDAKFVAHTLGGLDCYPAYXXXXXXXXXXXXXXXXXXXXXRQRGLRGGACGQSLLELKLAVHNSLDKYPAYHQGAFYLLSQPLVAHLHRGRAQLVAFANEDVTVGAWMMALNREMVALGSLSAAHLWDCTCATPTKWLRYDPNVFHHNCKALAQLQACAANL 345          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.440e-52
Identity = 113/261 (43.30%), Postives = 137/261 (52.49%), Query Frame = 1
Query:  748 APPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLH---------------------------------------------------NQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSN----FVLRPAVFFHDCKETSELRQCSKR 1353
            AP DG L GDV +V AP GY NI    K MM L  H  F+FL K + DTFVC+ RL   L                                                     Q + ++ ++YAGVPTAC    N +  VGRVI D  ++WYD KFV HT+ GL CYP    GAFYVLAQPLVE L  GR H+ TF NEDVTVGSWLLGVDR + TI D  ++RLW C C  +    +  + +VFFHDCK   +LR+C +R
Sbjct:  311 APDDGRLDGDVFWVRAPPGYNNIAEMTKQMMAL--HFLFRFLSKINGDTFVCLRRLVTLLAVQXXXXXXXXXXXXXXXXXXXRLVQXXXXXXXXXXXXXXXXXXXXXVTLLAAQTQATQRRLYAGVPTACGVHRN-NPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCSLDTMPQWARKSSVFFHDCKALEKLRRCDER 568          
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Match: A0A835YVE3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 9.390e-32
Identity = 91/277 (32.85%), Postives = 127/277 (45.85%), Query Frame = 1
Query:  553 LPRTDLLLAILSGDDKAARLKRDTIRELYDKYDGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNS--PANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYP----GAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIH-DFESSRLWNCVCGSNFVLRPA---VFFHDCKETSELRQCSKR 1353
            LP  DL +A+L   D+   LKR  +R +Y +Y          S           F+  FVV    APP+G L G+   VN P+GY  +  K    M L  H+DF+FL+K D DT+ C++R+   LH +    + ++YAG+   C    PA               K +D +F   T   + C+P    GAFY+L + LVEHL R R+      NED  VG WLLG  R L  I  DF       C C +     P     F+H CK   ++  C ++
Sbjct:   44 LPYVDLAIAVLIRGDEEEELKR--VRRIYWRYPNATVTTSVGS---------WSFRKYFVVADPNAPPEGTLTGEFFRVNVPNGYDRLADKTLATMALRHHLDFRFLVKTDADTYPCLQRVIETLHARGVAREPRLYAGLLNRCGKLFPAG-------------HKLHDAQFQAATGGVVPCHPMYHQGAFYILGRALVEHLDRSRDDLQVMSNEDAMVGLWLLGARRVLVDIGGDFH------CACFTKPRGEPGNDLPFYHFCKSEDKVAACLRK 290          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6P0_ECTSI6.380e-30997.45Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
D8LT07_ECTSI9.700e-10051.32Beta-1,3-n-acetylglucosaminyltransferase, putative... [more]
A0A6H5KLW3_9PHAE5.550e-9953.33Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A835YWI3_9STRA7.640e-8446.45Hexosyltransferase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A6H5JHW0_9PHAE7.700e-7546.21Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D7FQB9_ECTSI5.000e-7347.58Hexosyltransferase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YNB7_9STRA5.690e-7149.32Hexosyltransferase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A835Z4X8_9STRA9.680e-6337.50Hexosyltransferase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A835YTA1_9STRA1.440e-5243.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVE3_9STRA9.390e-3232.85Hexosyltransferase n=1 Tax=Tribonema minus TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig104contigEcto-sp6_S_contig104:375700..381280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score851.7
Seed ortholog evalue1.6e-244
Seed eggNOG ortholog2880.D7G6P0
Model size1380
KEGG koko:K00734
KEGG ReactionR05927
KEGG Pathwayko00532,ko00534,ko01100,map00532,map00534,map01100
KEGG ModuleM00057
Hectar predicted targeting categorysignal anchor
Exons8
EggNOG free text desc.galactosyltransferase activity
EggNOG OGsKOG2288@1,KOG2288@2759
Ec32 ortholog descriptionGlycosyl transferase, family 31
Ec32 orthologEc-26_000190.1
EC2.4.1.134
Cds size1380
COG Functional cat.M
CAZyGT31
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig104.954.1prot_Ecto-sp6_S_contig104.954.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig104 375700..381280 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348747.3724036-CDS-Ecto-sp6_S_contig104:375699..3762991682348747.3724036-CDS-Ecto-sp6_S_contig104:375699..376299Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 375700..376299 +
1682348747.3818343-CDS-Ecto-sp6_S_contig104:376885..3769691682348747.3818343-CDS-Ecto-sp6_S_contig104:376885..376969Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 376886..376969 +
1682348747.3891954-CDS-Ecto-sp6_S_contig104:377445..3776071682348747.3891954-CDS-Ecto-sp6_S_contig104:377445..377607Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 377446..377607 +
1682348747.396464-CDS-Ecto-sp6_S_contig104:378327..3784921682348747.396464-CDS-Ecto-sp6_S_contig104:378327..378492Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 378328..378492 +
1682348747.403833-CDS-Ecto-sp6_S_contig104:379117..3792041682348747.403833-CDS-Ecto-sp6_S_contig104:379117..379204Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 379118..379204 +
1682348747.4111722-CDS-Ecto-sp6_S_contig104:379655..3797661682348747.4111722-CDS-Ecto-sp6_S_contig104:379655..379766Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 379656..379766 +
1682348747.4186716-CDS-Ecto-sp6_S_contig104:380553..3806431682348747.4186716-CDS-Ecto-sp6_S_contig104:380553..380643Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 380554..380643 +
1682348747.4258645-CDS-Ecto-sp6_S_contig104:381199..3812801682348747.4258645-CDS-Ecto-sp6_S_contig104:381199..381280Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 381200..381280 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig104.954.1

>prot_Ecto-sp6_S_contig104.954.1 ID=prot_Ecto-sp6_S_contig104.954.1|Name=mRNA_Ecto-sp6_S_contig104.954.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=460bp
MSKPKHQMPPRLSSLTSLANGGEAPAHSPTGSRRRPRRPASGTSLHLSDS
QQKSSRPSVQRLFLSAADLLAKTTTKCALLTCASGMAWASLIVWILGPAV
SSPDTTTQVDQHQQQEVPTLSPAAGAFPIVDEGSLLPGWTPLGHHSRFMG
REAFPEQFEHWGEDREVVIHSVDVGPLTDEGDQVLPRTDLLLAILSGDDK
AARLKRDTIRELYDKYDGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTA
PPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFV
CVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWY
DQKFVHHTLAGLDCYPGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSW
LLGVDRALGTIHDFESSRLWNCVCGSNFVLRPAVFFHDCKETSELRQCSK
RLVRAHLHC*
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mRNA from alignment at Ecto-sp6_S_contig104:375700..381280+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig104.954.1 ID=mRNA_Ecto-sp6_S_contig104.954.1|Name=mRNA_Ecto-sp6_S_contig104.954.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5581bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:375700..381280+ (Ectocarpus species6 EcLAC_371)
ATGAGCAAACCGAAGCACCAGATGCCTCCTAGGCTTTCCTCCCTCACGAG CCTCGCCAACGGCGGCGAGGCTCCGGCGCACTCCCCCACCGGCTCAAGAA GACGCCCCAGGAGACCAGCATCCGGCACATCCCTCCACCTCTCCGACTCC CAGCAGAAGAGCAGCAGGCCGTCGGTGCAGCGGCTTTTCCTGAGCGCGGC AGACCTCCTCGCCAAGACCACCACCAAGTGCGCACTCCTCACGTGCGCTT CTGGGATGGCCTGGGCGTCTCTAATCGTGTGGATACTCGGCCCAGCAGTG TCTAGCCCGGATACGACAACCCAGGTCGATCAGCATCAGCAGCAGGAGGT CCCAACGTTGTCCCCAGCAGCAGGCGCCTTCCCGATCGTAGATGAGGGCT CCTTGTTACCAGGGTGGACGCCGTTAGGCCACCACTCGAGGTTCATGGGC AGAGAGGCCTTTCCCGAGCAGTTCGAGCACTGGGGGGAGGACCGGGAGGT TGTGATACACAGCGTGGATGTGGGCCCGTTGACCGACGAGGGCGATCAGG TGTTGCCGAGGACGGACCTCTTGCTAGCCATCCTGTCTGGGGATGACAAG GTGCGGTGTGTTCTGGGGTTGCAGGAGGCCAGAAGGGTGTGGGGCTGTGC TCGATGAGACGCGTCTGTGTGTATAATGAGTAGCCACAGGTTCAACTGCT CCATAGACCGACCGTACTGCTGTATTCACCAGAGTAGACCCTTTCGACAC ACGACGGGAAGATGATACCATACCCGCGAGACCGTCCGCGGAGGAACATG CAGCAGTAGTTGGCTCTGTCTCTACAGGCGACCCAGGACGTGTGTACGTA CGATGAACCAACCAAAATTGAGCTGGCTAGATAGAACACGCGAGATCCTC TGACGGTGCTGCACTATGAGGTTGGGTACCCGGGTTAGATGGGTAGCTTG TAAATTGTTCCGATCATGTCCAGCAGTGGAAAGTGCAAAAACCGTTTCAC GGCGGTGTGTGTCAGCAGGGTTCATGATTCATGATTCAGATGGCTCTGTG TGTCCAATTTCCAGGGGCTATAAAGTCGCTGTTTGATTACCGTTTCACGC GGTAAACTGTCCAAACGCGTGCATGCCGTTCTGCTGCACTGGATCGCTGC TCCGGTGTTTTTTTGCTGGGTGCCTCTTTCGCACAGGCGGCGAGATTAAA GCGCGACACCATCCGCGAACTGTACGATAAGTACGACGGCTGGGTCACCG TCGGGGGCGAGCGATCACAGGTGTGTGCTTGCTCTGAAATGGACTGCTGA TCGTGGTCCGCTGCACTAGGCAGCAGTAGCAGAGTGCCAGCGAGTCTCTC TCTTCCTCGTGTGCGCGTCGGAATAAGCGAGATCAAAGTCGGCGTTAAGA GACTACGCGAGGCAACCGGGCCTGCTTTCTTAATGCTGAGAGCCACGAGT AGCCCATGCAAACTGTAAACGCTATACCTAGCCAACTTTCAAGACAACAA GCGGCGTTGCAGGTGCCGCGAGACGGCCTAGCTATGATAGGTTAAAGACA GGCAGGAAACTTGTACATCAAACACCAACGTGAACATGTCGAAGGTGTTC TCACGATTGTTTTCGGCCCGTGCGCTGCAACGTCCAGTTTATGTGGTTGC GTTGGCAGTTACGCACGCGTTAGCATCCTCATACCCCGCTCAGACAACTC TTCTTTGGCCCGTTGCGCTTCCTCGTTTTTTCACGTCCGACACAAGGAAC AAAACGAGGAAACCGTAGAGATGGAGTTTCAGGTAATTTTCGTGGTGACA AGGTCTACCGCTCCTCCGGACGGAGAGCTTGTGGGGGACGTGCTATATGT GAACGCCCCCGATGGTTACCGCAACATCGTGTACAAGGTCAAGCACATGA TGGGACTGGTGAGAGGCCCATTATCGGTTAACACGAATCGACGGCGGAAT GGACGGATCATTCGCTGTTCGGCAGCAGAGACAGCCCTGACGATCTTGTC CACGCTGGTGTCgGGTGCATGAAAGCTCCCTTTGCGCTTGCTGCCGATTT TGTTCTAGGCCGACGCGCTGTCATCCTTGAGACGCACACCACGGGGGTGG CAGCGCTTTTGCAGCAATTCTGGGTCCTCGCTGTACGTTAGGTTGAGCAG TCGCAGCGCTTTCTGTCGGAAGTCCCTTTGAAATTCGCCGATCTCCAACG CGCAGGACATCGATGAGAATCTCTCAGCGAAGCGTACAACCCTTCGACCC GTGGTCGCCTTGCCAAGCGTTAAACATGGGTATCCTTCGTCATCCACTTA TCAAGTTTGTCGGTATCTCAACGGCAACATTGCTGCCCTCAAGAGAGAGG GAGCCGTTGAGTGTGTGGTTTCCTCCAACTCCGAAGATTCTTGTCCCAGG TTGTTCCACGGCAGCCCTGGCAGCAACGCGATTTTTAAGACTGATGGAAG CTTTAGCTGCAAGGATCTCGAACCAAGGAATTATTTTTTTTCGTCAATCC ACTTATGTGTACCTCGGTTTCTCGCTAGCGGTACCCCCCCCCCCCCTGAG TTATTCTTGGCCGTTTTCCTCTCTCGCACGCCTGTTTGGGTTGACCCGTG TTCCGGCTGTCCTTGAACGGACTGAAAGGTGCGACATATCGACTTCAAGT TCTTGCTGAAGGCAGACGACGACACCTTCGTGTGTGTGGAGAGACTGGCC AACTTCCTGCACAATCAGCCGGAAGAATCTAAGGACAAGATTTACGCCGG TGTTCCAACAGCGTGCAACTCTCCGGCTAACCCCAGCGTAAAAGTGAGTT GCTCTTGTTGTTGTTGTTTTCGTTGCTGTTGTTTTAATTTTTGGCGTTGC AAAATTCGCATGTAGGAACACGTGTGCTGCTGTATCTGGTCGCCCCATGG TCTAGTCGGTAAAGATAGACAGCTATCCTCGATGGTGAGTAAAAGGCATG GCGAGAACAATACGAAAATACATCGATTTTCGAGCTCTGTTCAGAACATG ATGCACAATAAATGACACAACAACTAGTTGCGGGCTCTGTTCAGGGCACA TGAAAGACTAGTAGAACAAACCAAGGTACAACAATGAGGCTCGAGTTCTA TTCACGGCATCCTACTTGTCAAGGAAGCAAGAGTAACAGCGTCCGGCTAT GTCCGTTAGCACTCCTTCCTTCCCAGGAACAATACTGCCGAACGCTTTCC CAAACGTGAGCGCTAGTGCCACGTGCAGGGGAGAGCACTGGTCACATTGC GCGCTCTGAAACCGTTGCCCCGACTTTGCGGCCAGCACCCACGACACTCT ATATCGAGAGCGGCTGATAGGTCTTCGCGTTCGACACACAAACGTTGGCG ACTCAAGTTCGTGCATGCGTTGTTGTCCTGGTGCACGGAATCCTCGTTTG CGCTGATTGGTGCGGCAGGTTGGGCGTGTGATAAAGGACCACAAGGATAA GTGGTACGACCAGAAGTTTGTCCACCACACGCTGGCGGGGCTTGACTGCT ACCCGGTCTACATGCAGGCGAGCCGATGCTAACGTACCGCTCAAGGGTTA CCGGTTTATTTGTCCGATCAGGCTTTCGTTGTGGGTAACCTGTTGGGCTT GCCAGGCGCTCCCGAGTTCAGACTCGATGACATACATCTTCGCGTCACTG AGTGGAGCGGGAACTTTCTTGAAACGTCTGGTTTTATTTCGAGGAAGTTT TTGGTGGCGGGAATTGCATTTTTTTTTGTTTCTTTCCATAACGTGGTTTT GCAGCTCAACAGAAGTGAAGCTCTTCACGGCATTGACTTCGTCGCAGAAC CTCGATACATCATCCCGACGAGCCGTGCTGCCATAAATCCTTGCAACACC TTTGATTGCAGGTTCGGATCTCTCTGACGTACATTTACCCATCAGCCCCT CTCTCTCTCCCTCACTCACTCCCTCTCTTTCGGTCCCTTTATGTGGTTTT CTTCAGGGAGCGTTTTACGTGCTTGCGCAGCCATTAGTAGAGCACTTGTA CAGAGGGCGGGAGCACTACGACACCTTCATCAACGAAGATGTCACCGTTG GCTCTTGGCTGTTGGGGGTGAGTACAGTATCGCCGACAACTGCTGTGCCT GCTGCCCATACTTTCAAGCGCTGTCCTCACAATAGCGCCTGCGCTGTGAC ATGTATAATGCCCGTGGTGCTCAAATCTGTTCGAAAAGTCACACACGCTT CAAGTTTCGTCCTCACGAAGCATTGTGCTTTGGCAGGTAGCTGACGCCCA TCTCCCATCTTGCTGGAATTCATCCGAAAACTGCCTATCAATTTCTTCTA TCAGTGCCCATGACGACGGTATTCGGTGTGGGTACACATCACGATCGCCC CATCGTCCATAGCCACCGCAACTCCAAACTATTGTTCCTGGTAGACTGAG CGATGAATCGATCGACCTGGGACAGAACGGCTACTGGCCGTCCCGCATTA CCAGTTCAGGTGTCTTGAGCAATACTAATATGCGTACGCTAACTAAGACC TCTTCAACACGCACTCTACAACTTTGCAAGGAATTCTGCTTCACTGGTGG CTGTTGCTGAACAGTTTACGAAACGTTTTGTTCCCAGAGGTGTGCAGCGG TGGCCAGGATAGATGGGGCGGAGTTACGAGCGAACAGCACACACACAGCG CACCCTGCCGGGAGAGCCCGATGGCTGGAAATAATGTTCATCCCGCGGTA AAACTGACGTAATTTCGTTTTGTCAGCCGGGTGCCGCAGTCGATGTCATC GAAAAACGGACACACACATGTCACACGTCTTGTGTTGAGTCAGCCGGTTA GCGCGGCCATGCTAATGTTAAAGACAGACACACACACATGAAACGTTTGT GCAGGTGGACCGAGCGCTAGGAACGATACATGATTTCGAGTCATCAAGAT TGTGGAACTGCGTGTGCGGCTCCAATTTCGTCTTGAGGCCGGCCGTGAGG AAGGACCAGGCAAGATTTTGCCATCAAGCCCATTGTCGCGGTTTTTCTGG TAGCATTTGGGCTATGCTTTGATGGCAGCGGTTGTGGTATTGTTTTGTTT GAAGTACAGTTGTAGGGACAGTTTTGCTCTGTTACACTTTTATGGAACGT TCCGGCCTCGGCTCAGAACGTTCTGATATCCGTACCGGTGCAACTGATCG GACGCCTTCCGTGGTGACAGGTTAGAGCTAAATTTGTTTGCACACTGAGG CGCTTTGGGGGTATGTCTATTTTACGTTGCTTACACCCAACCCTTGGTTG TTTTTTCGAGAGGGACGATGGCCGTGAGAGCTTGCTATCTCCGTACCCCA CTTGTTCTCCTTTTCGCCCTTTCCTTGCCGCCCTTTCCCTCCTCTTCTGC TCCTCGAACCTTTGCTCCTGTCTTCTCTTTCGTTCTAGGGTTGCCGGTCT TACGCTTTCGTGTTGTATCACGCTCGCCCGGAAACGGACCGCGTTAATAT CGTGGACTTTCGTGCCTATCTTCCTGTGTTCCTACACAAAACAAATACAG GTGTTCTTTCACGACTGTAAGGAAACAAGCGAGCTCCGTCAGTGCTCCAA ACGGCTCGTCAGGGCGCACCTCCACTGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:375700..381280+

>mRNA_Ecto-sp6_S_contig104.954.1 ID=mRNA_Ecto-sp6_S_contig104.954.1|Name=mRNA_Ecto-sp6_S_contig104.954.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1380bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:375700..381280+ (Ectocarpus species6 EcLAC_371)
ATGAGCAAACCGAAGCACCAGATGCCTCCTAGGCTTTCCTCCCTCACGAG
CCTCGCCAACGGCGGCGAGGCTCCGGCGCACTCCCCCACCGGCTCAAGAA
GACGCCCCAGGAGACCAGCATCCGGCACATCCCTCCACCTCTCCGACTCC
CAGCAGAAGAGCAGCAGGCCGTCGGTGCAGCGGCTTTTCCTGAGCGCGGC
AGACCTCCTCGCCAAGACCACCACCAAGTGCGCACTCCTCACGTGCGCTT
CTGGGATGGCCTGGGCGTCTCTAATCGTGTGGATACTCGGCCCAGCAGTG
TCTAGCCCGGATACGACAACCCAGGTCGATCAGCATCAGCAGCAGGAGGT
CCCAACGTTGTCCCCAGCAGCAGGCGCCTTCCCGATCGTAGATGAGGGCT
CCTTGTTACCAGGGTGGACGCCGTTAGGCCACCACTCGAGGTTCATGGGC
AGAGAGGCCTTTCCCGAGCAGTTCGAGCACTGGGGGGAGGACCGGGAGGT
TGTGATACACAGCGTGGATGTGGGCCCGTTGACCGACGAGGGCGATCAGG
TGTTGCCGAGGACGGACCTCTTGCTAGCCATCCTGTCTGGGGATGACAAG
GCGGCGAGATTAAAGCGCGACACCATCCGCGAACTGTACGATAAGTACGA
CGGCTGGGTCACCGTCGGGGGCGAGCGATCACAGGAACAAAACGAGGAAA
CCGTAGAGATGGAGTTTCAGGTAATTTTCGTGGTGACAAGGTCTACCGCT
CCTCCGGACGGAGAGCTTGTGGGGGACGTGCTATATGTGAACGCCCCCGA
TGGTTACCGCAACATCGTGTACAAGGTCAAGCACATGATGGGACTGGTGC
GACATATCGACTTCAAGTTCTTGCTGAAGGCAGACGACGACACCTTCGTG
TGTGTGGAGAGACTGGCCAACTTCCTGCACAATCAGCCGGAAGAATCTAA
GGACAAGATTTACGCCGGTGTTCCAACAGCGTGCAACTCTCCGGCTAACC
CCAGCGTAAAAGTTGGGCGTGTGATAAAGGACCACAAGGATAAGTGGTAC
GACCAGAAGTTTGTCCACCACACGCTGGCGGGGCTTGACTGCTACCCGGG
AGCGTTTTACGTGCTTGCGCAGCCATTAGTAGAGCACTTGTACAGAGGGC
GGGAGCACTACGACACCTTCATCAACGAAGATGTCACCGTTGGCTCTTGG
CTGTTGGGGGTGGACCGAGCGCTAGGAACGATACATGATTTCGAGTCATC
AAGATTGTGGAACTGCGTGTGCGGCTCCAATTTCGTCTTGAGGCCGGCCG
TGTTCTTTCACGACTGTAAGGAAACAAGCGAGCTCCGTCAGTGCTCCAAA
CGGCTCGTCAGGGCGCACCTCCACTGCTGA
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