Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 283 |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Ec32 ortholog description | Hypothetical protein |
Ec32 ortholog | Ec-26_000260.1 |
Cds size | 231 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1682348746.3884628-UTR-Ecto-sp6_S_contig104:255736..255788 | 1682348746.3884628-UTR-Ecto-sp6_S_contig104:255736..255788 | Ectocarpus species6 EcLAC_371 | UTR | Ecto-sp6_S_contig104 255737..255788 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1682348746.4036355-CDS-Ecto-sp6_S_contig104:255788..255928 | 1682348746.4036355-CDS-Ecto-sp6_S_contig104:255788..255928 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig104 255789..255928 - |
1682348746.4142506-CDS-Ecto-sp6_S_contig104:256283..256374 | 1682348746.4142506-CDS-Ecto-sp6_S_contig104:256283..256374 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig104 256284..256374 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.947.1 >prot_Ecto-sp6_S_contig104.947.1 ID=prot_Ecto-sp6_S_contig104.947.1|Name=mRNA_Ecto-sp6_S_contig104.947.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=77bp
MCSGGVALKEELPDYCEAATCTEAECCDTSDNGDDVETEIIAGVVSSVAA ALIIGAGAWAWQKCRNKKEGVRQDAQ* back to topmRNA from alignment at Ecto-sp6_S_contig104:255737..256374- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig104.947.1 ID=mRNA_Ecto-sp6_S_contig104.947.1|Name=mRNA_Ecto-sp6_S_contig104.947.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=638bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:255737..256374- (Ectocarpus species6 EcLAC_371) ATGTGCAGTGGAGGTGTAGCTCTGAAGGAAGAGCTACCGGACTACTGCGA
AGCGGCCACCTGCACGGAGGCCGAGTGCTGCGACACAAGTGGTGAGTGAA
TACTTCTGCGATGAATTCAAACTACTACTGCGGTGAGTGAATATTTCTGC
GCAACATCCGCCGACGACCACTTTCTTCCCGGCTCTGACTTCTATTGACG
ATTCCGTATACGTCTTGACCATGCAATGTAAATTCTTAAGGGATAGGGTC
GGCTCGCTCTCGTCATGAGACACCAATTCGTCGCACGTTGTGTGTGTGTC
ATCCCCGTCTACTCTGGACGCCAGTTAGTAGGTCATGCCCTGTCGATGTT
CTATTTTGGCATTTTCCTCCGGTACTCGTACTCTGAGCTCACCCCTTCCA
TGCATCCAACCGCCGCCGTCTGTTCCGTCTTCAAACTCTTCCTCAGATAA
TGGAGATGATGTAGAAACTGAAATTATTGCTGGTGTTGTGTCCAGTGTGG
CGGCCGCTTTGATAATTGGAGCCGGTGCCTGGGCGTGGCAAAAGTGCCGA
AACAAAAAAGAGGGGGTACGGCAAGATGCTCAATAAAGCACCTCCGCCCG
CTCACTGGTTACCTGGCAGTACGTGTGTGAGGTGTAGG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig104:255737..256374- >mRNA_Ecto-sp6_S_contig104.947.1 ID=mRNA_Ecto-sp6_S_contig104.947.1|Name=mRNA_Ecto-sp6_S_contig104.947.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=231bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:255737..256374- (Ectocarpus species6 EcLAC_371) ATGTGCAGTGGAGGTGTAGCTCTGAAGGAAGAGCTACCGGACTACTGCGA AGCGGCCACCTGCACGGAGGCCGAGTGCTGCGACACAAGTGATAATGGAG ATGATGTAGAAACTGAAATTATTGCTGGTGTTGTGTCCAGTGTGGCGGCC GCTTTGATAATTGGAGCCGGTGCCTGGGCGTGGCAAAAGTGCCGAAACAA AAAAGAGGGGGTACGGCAAGATGCTCAATAA back to top
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