Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 597 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 597 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348745.4245713-CDS-Ecto-sp6_S_contig104:145183..145559 | 1682348745.4245713-CDS-Ecto-sp6_S_contig104:145183..145559 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig104 145184..145559 - |
| 1682348745.4322-CDS-Ecto-sp6_S_contig104:147276..147497 | 1682348745.4322-CDS-Ecto-sp6_S_contig104:147276..147497 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig104 147277..147497 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.937.1 >prot_Ecto-sp6_S_contig104.937.1 ID=prot_Ecto-sp6_S_contig104.937.1|Name=mRNA_Ecto-sp6_S_contig104.937.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=199bp
MDSAEPPRLEEGGASRAGSEPPPEEADPRGFHELAFLGHSNASEAEPELE
ERDVGPEFDSYEDLDGDKLRLLDSFSIYYEDGRLAPPRALDSAKERGQTF
VAFGTLVAPLTTDASLKLISLDARLKCRVPPCLPKSLVGGAPEPLPWVAA
AGGASATPSTPKGGGGTSGRGGKGGANSGGGKKQHPKARQKATPPPPPA back to topmRNA from alignment at Ecto-sp6_S_contig104:145184..147497- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig104.937.1 ID=mRNA_Ecto-sp6_S_contig104.937.1|Name=mRNA_Ecto-sp6_S_contig104.937.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2314bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:145184..147497- (Ectocarpus species6 EcLAC_371)
ATGGACTCGGCCGAGCCTCCGCGGCTTGAGGAAGGCGGCGCCTCCCGGGC
CGGAAGCGAGCCGCCCCCAGAGGAAGCTGACCCACGAGGTTTCCACGAGC
TGGCCTTCTTGGGCCACAGCAACGCGTCCGAGGCTGAACCGGAGCTGGAA
GAGCGAGACGTCGGGCCTGAATTTGATTCGTACGAAGACCTGGATGGAGA
CAAGCTCCGGCTGCTCGACAGGTAGGCCGTGCTTCTTGCGTGGGCGGGGG
GAGCTTTATTTGCGCGGGAGTCGCGGCGGGCGAGTTAGAAGACCACCATC
GAGTCAGTTCTCACGCTCCCCCCGCTTCTCTTTGATTTTTTCTTTACTGT
TTTTGGAAGAAAGACAACACACAGACAGCAGCACCATGTTTGTCGCGCGC
GGAGAAAAGAAACAGCGGGCAGCCGCAGACGTTGGCCATATTGGGAACAG
CTTTCAAATGTTGACTTCAAGGGCGAGCTGGTTTTGTCGTATGGTTGCTG
ATGTTGTCGTGCATTTCAAGGCGCCGACTTCGCGGGTGCTGCTTCAAAGT
GCTTGGACACACCGGTTGGTTGTGGGTGCAACCGTTGTCGTCGCTGCCGC
AAATCCTTGGTCGCACGCGCGCGGCTGATAGCGGCACAGCGATCGAGATT
TACTGAAAAAGTTTTAAGTTCACCGAACCTCAGACAACACCGTCCCTGGG
GCCGGGGTGGGGCGTGTGCTTGCGGCAGGGAGGCGAAGCTATTGACCGGC
TTCGTGGGTGTTGGTATTATCGAAGGGGTTGGCACGATGCCACGTGTTGG
TGATGTCGTTGCCGCAGCAGTATGCTCGAAACTTCAACGCGCTTTCGCTG
CGGGGGAGCATGTCGGAACGCCCGCCAATTCTTTTCAAATACGTTTCGCT
GTCGGAACATCTTTCGATACAGCAGTACTTCTGTTTGTAGGATAGACAAG
TACCAGTATTAGCTAATCCCGAGTACAGCAGTACTTGTTGTATACGCTGA
AGAAGGTGAATTTCACATCACATGTTTGCTAGTATACAAGCCATTTCCAA
TGCTGAAATGCTGCCACACCATCACCACATTGCTATTATAGCCCTCGGGT
ATTTTTCCTTCTTGGGATTGAGTGTCGGCCTTTGATCTGGAGATTGGGCG
GTGAGGGCGATGAGAAGCAGCATGGCACACCTTCAGCAGTGGGTCGGCCC
TACTCCCGCCGCCGCATTGTGAATACCGCGTGCTCTTCAATGAGTACTTA
GTATGTACCACAAATCGCCTGAAGTTGGCCTGCTGTCTCGCAAAAGCTGG
ATGTAATTGTAGGCCACGGAATTCACCCCAGAGACAGCAGGAGTATTGAA
TCAACGACTTGACGGACTCGAAGCGGTTGGTGCATGTTTGTCGTCGTGTG
GGATGCTCCTTCTATCGGTTCCAGCACGCCCGTGTCTCCTCGTGGCGCCA
ACTGCAGCCGCGATGATGCAGACGACACGTACGCCGGCCGCTCGATGCGA
AGCTTCAGCTATACAAAAATACGATATGTTCGTCTCTGCTGTCCCATTAC
AATACGCTTGCTGTGTCGCTTCGTCAACAAGCCTACAGCGGTATGCAGAG
CACTTTTTTGTGTTCCTTTGCTGTGTTGCCCCCTTAAGTTGTTGTTGGGA
ACGCTAGGCTCTGAGCATGCGTGGACTTGACTAGTTCTGTTTTCCCGACA
TGCTCCCGAAGCCAAGAATAGGTACACAACAGCAGTATTGTAACACTTTT
GTGAAAGCCATCCCGTTGCCTACTATTATACTTCGTACGATTGCGCTATT
TACCTGCATCAAAAGTGGCGCCGCTCTAGCTACAGCACGTGCTGTCGGCG
GCCTTGGCACCATGAACCATAACCATAACCATCACAGAGACTCATTGAGG
GATCTTTCGTCTGCTGCGACGCGTGCCCCCCCCTTCAGCTTTTCAATCTA
CTACGAGGACGGTCGGCTAGCCCCTCCGAGAGCCCTCGACTCCGCCAAAG
AGCGGGGCCAAACCTTTGTGGCGTTCGGTACCCTGGTGGCGCCCCTTACA
ACCGACGCGAGCTTGAAGCTCATCTCCCTCGACGCACGGCTAAAGTGCAG
GGTACCCCCCTGCCTCCCCAAGAGTCTGGTCGGCGGGGCCCCCGAACCGC
TCCCGTGGGTGGCCGCGGCAGGGGGCGCGTCCGCCACGCCTTCCACGCCG
AAGGGGGGAGGGGGGACATCGGGCCGTGGAGGAAAGGGAGGGGCAAATAG
CGGGGGTGGGAAGAAGCAGCACCCCAAGGCGCGTCAAAAGGCAACGCCCC
CGCCACCACCCGCG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig104:145184..147497- >mRNA_Ecto-sp6_S_contig104.937.1 ID=mRNA_Ecto-sp6_S_contig104.937.1|Name=mRNA_Ecto-sp6_S_contig104.937.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:145184..147497- (Ectocarpus species6 EcLAC_371)
ATGGACTCGGCCGAGCCTCCGCGGCTTGAGGAAGGCGGCGCCTCCCGGGC
CGGAAGCGAGCCGCCCCCAGAGGAAGCTGACCCACGAGGTTTCCACGAGC
TGGCCTTCTTGGGCCACAGCAACGCGTCCGAGGCTGAACCGGAGCTGGAA
GAGCGAGACGTCGGGCCTGAATTTGATTCGTACGAAGACCTGGATGGAGA
CAAGCTCCGGCTGCTCGACAGCTTTTCAATCTACTACGAGGACGGTCGGC
TAGCCCCTCCGAGAGCCCTCGACTCCGCCAAAGAGCGGGGCCAAACCTTT
GTGGCGTTCGGTACCCTGGTGGCGCCCCTTACAACCGACGCGAGCTTGAA
GCTCATCTCCCTCGACGCACGGCTAAAGTGCAGGGTACCCCCCTGCCTCC
CCAAGAGTCTGGTCGGCGGGGCCCCCGAACCGCTCCCGTGGGTGGCCGCG
GCAGGGGGCGCGTCCGCCACGCCTTCCACGCCGAAGGGGGGAGGGGGGAC
ATCGGGCCGTGGAGGAAAGGGAGGGGCAAATAGCGGGGGTGGGAAGAAGC
AGCACCCCAAGGCGCGTCAAAAGGCAACGCCCCCGCCACCACCCGCG back to top
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