mRNA_Ecto-sp6_S_contig103.929.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: D7G0Y5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Y5_ECTSI) HSP 1 Score: 512 bits (1318), Expect = 3.290e-177 Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 1
Query: 1 MRWAVAFLPLCLVTASGFMMRTCPAGRSCRMADQSQHDGVERARPAPSSSPLSRQAFLGGAAAAIPLVVGVGRAVADNEIIEKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
MRWAVAFLPLCLVTASGFMM+TCP GRSCRMADQSQHDGVERA+PAPSSSPLSRQAFLGGAAAAIPLVVGVGRAVADNEIIEKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML
Sbjct: 1 MRWAVAFLPLCLVTASGFMMQTCP-GRSCRMADQSQHDGVERAQPAPSSSPLSRQAFLGGAAAAIPLVVGVGRAVADNEIIEKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 264
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A835YNC6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC6_9STRA) HSP 1 Score: 183 bits (465), Expect = 8.880e-51 Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 283 EPEVTQRAFMDITIGDSPSGR----------LVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGK--SGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
EPEVT RA M +++ P+G +VI LYGK VP+TV NF AL+ G G SY+GT Y+V+ GLN+Q GA+G SGK +G+S+ E ENF+++H EG++SMVR D + DSRFFI+IK DAGWAD RYVAFGR+ EG+D + I+++KV+ +N+P KPVVIE+C ML
Sbjct: 2 EPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVML 184
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A6V1WNP3_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WNP3_HETAK) HSP 1 Score: 164 bits (416), Expect = 3.150e-43 Identity = 93/216 (43.06%), Postives = 132/216 (61.11%), Query Frame = 1
Query: 154 LSRQAFLGGAAAAIPLVVGVGRAVADNEIIEKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIP--QENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
LSR+ F+ +AAAI +G + + AD+I + +VT + F D++I P+GR+VI+L+G+ P T NF AL+ G+ G Y+G AYRV+ ++Q+G+IG ++G+SG SS P ENF+I H GL+SM R D + DSRFFI + DAGWAD +YVAFG++ EG VV IE++K + N P K VVIE CG+L
Sbjct: 25 LSREHFIASSAAAI---LGCSQIASPFPSF----ADQIIFAEDKYKVTSKCFFDLSIEGKPAGRIVISLFGEEAPQTCANFRALVEGR--PGYGYRGERAYRVIQDFSVQIGSIGDKTGRSGKSSFDGGAPFGPENFNIPHTDAGLVSMARGLDGKTDSRFFIQTQGDAGWADGKYVAFGKVTEGFTVVQEIEKLKTQPPQNNPTKKVVIEDCGVL 231
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A6V2NXR4_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXR4_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.310e-41 Identity = 83/170 (48.82%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 286 PEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
P VT+R ++D+ IGD GRL I L+G+++P TV NF L + SY GT YRVL IQ GAIG +GK+G S+ G + +N+ + H K+GL+SMVR+ DSRFFI+ DDAGWADD+Y AFG + +GMD V IE+V V N PK PV I CG+L
Sbjct: 66 PVVTKRVYLDVQIGDKEPGRLTIGLFGELMPKTVDNFEQLCSTN-----SYAGTTFYRVLSDFTIQGGAIGDPTGKTGKSAFGSSFEPDNYRLMHTKKGLVSMVRSLSGGVDSRFFINCNDDAGWADDKYAAFGIVEDGMDYVKKIEKVSVSPPKNSPKTPVTIIGCGVL 230
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A7S4MQY5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQY5_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.580e-41 Identity = 95/214 (44.39%), Postives = 125/214 (58.41%), Query Frame = 1
Query: 154 LSRQAFLGGAAAAIPLVVGVGRAVADNEIIEKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
LSR+A + A A +V+G G A I+ V P +T+R F+D+ IGD GR+VI LYG+++P T +NF L G SY GT YR L I GAI SG SG S+ G +N+++KH K GL+SMV++ DSRFFI+IKDDAGWADDRY AFG + EGMD+V IE+V V N PK + I++ G+L
Sbjct: 80 LSRRAAVQSALAPAFVVMG-GAGPAQASYIDPTV--------DVPTITKRVFLDVKIGDEEPGRIVIGLYGELMPKTSENFEKLCEGN-----SYGGTTFYRALSEFQISGGAIDDPSGNSGKSAFGAPFEPDNYNLKHTKAGLVSMVKDKSGGADSRFFITIKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVSRPKNTPKVAISIQRSGLL 279
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A7R9W6P2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6P2_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.850e-40 Identity = 88/186 (47.31%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 256 ADKIAAGWQEPEVTQRAFMDITIGDSPS------GRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
A I P VT+R ++D+ IGD + GRLVI LYG+++P T +NF L G Y GT YRVL L I GAIG G SG S+ G + +NF++KH K GL+SMVR+ DSRFFI++KDDAGWADDRY AFG + EGMD+V IE+V V N PK V I G +
Sbjct: 6 ASYIDPALDAPRVTKRVYLDVMIGDDEAAEAEGAGRLVIGLYGELMPKTAENFERLCEGNG-----YAGTTFYRVLSDLQISGGAIGDPKGDSGKSAFGSSFEPDNFNLKHTKAGLVSMVRDKTGGVDSRFFINLKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVARPKNTPKVAVRITGSGFV 186
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: B8C839_THAPS (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C839_THAPS) HSP 1 Score: 148 bits (373), Expect = 7.650e-38 Identity = 85/180 (47.22%), Postives = 115/180 (63.89%), Query Frame = 1
Query: 286 PEVTQRAFMDITIGDSPSG-RLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRS--GKSGVSSTGENIP--QENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAE-----GMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
P++TQ+ ++DI + + + RLVI L+G+ + T +NF L T N G SY GT YRV+ G IQ GAIGS S GKSG S+ P +N++IKH +GL+S VRNA+ DSRFFI +DDAGWADDRY AFG + E GM++V + R++V+ N PK PV+I CG+L
Sbjct: 1 PKITQKVYLDIKLPTNKTPKRLVIGLFGEAMHKTAENFQTLCT--NTEGPSYAGTSFYRVISGTTIQGGAIGSNSSSGKSGTSAFENGAPFTPDNYNIKHRTKGLVSAVRNANGTIDSRFFIQTEDDAGWADDRYAAFGIVLEEEGTGGMELVKKLSRLEVKAPQNSPKDPVLIVGCGLL 178
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A1E7FCA1_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCA1_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.340e-36 Identity = 81/170 (47.65%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 286 PEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSS--TGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCG 789
P++T+R ++D+ G + GRLVI LYG ++P T +NF L A SY GT YRV+ IQ GAIG SGK+G SS G++ +NF+IKH K G+LSMV+ DSRFFI+ ++DAGWADDRY AFG + EGM +V IE+V V N P V I G
Sbjct: 3 PKITKRVYLDVEFGKNEKGRLVIGLYGDIMPKTAENFEKL-----CASNSYAGTNFYRVISDTTIQGGAIGDPSGKTGKSSFDDGKSFEPDNFNIKHSKSGILSMVKGIGGV-DSRFFINTQEDAGWADDRYAAFGIVEEGMYLVKQIEKVPVSPPKNSPVNEVKILASG 166
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A7S2H9L4_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9L4_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.830e-36 Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 286 PEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKV 738
P VT+R ++D+ IGD GRLVI L+G+++P TV+NF L + SY GT YRVL IQ GAIG SGK+G S+ G +NF + H K+GL+SMVR+ DSRFFI+ DD GWADD++ AFG + EGMD V IE+V V
Sbjct: 83 PVVTKRVYLDVQIGDKEPGRLVIGLFGELMPKTVENFEQLCSSN-----SYAGTTFYRVLSDFTIQGGAIGDSSGKTGKSAFGSPFEPDNFRLMHTKKGLVSMVRDRSGGVDSRFFINCNDDGGWADDKFAAFGIVEEGMDYVKKIEKVSV 228
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Match: A0A7S1T924_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T924_9RHOD) HSP 1 Score: 155 bits (391), Expect = 6.680e-36 Identity = 82/179 (45.81%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 259 DKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 795
DK + EP +TQ+ F+DI+I RLV+ LYG+VVP T +NFV+L G + GVSY+G++ YRV+ GL IQ G IG + G SS G +ENF I H EG++SMV D DSRFF + D+G+ DD+Y AFGRI G D +H ++ + V G N+P+ V I CG+L
Sbjct: 640 DKFSLRASEPRITQQCFLDISIAGMSPERLVVGLYGEVVPKTTQNFVSLCEG--STGVSYRGSQVYRVVHGLTIQAGNIGPDGTEDGQSSFGLPFERENFKIMHDVEGVISMVNRKDGLNDSRFFFTTVSDSGYLDDKYCAFGRIIWGRDFLHKLDLLPVIGPKNRPRDDVRIVNCGIL 816 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.929.1 >prot_Ecto-sp6_S_contig103.929.1 ID=prot_Ecto-sp6_S_contig103.929.1|Name=mRNA_Ecto-sp6_S_contig103.929.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=266bp MRWAVAFLPLCLVTASGFMMRTCPAGRSCRMADQSQHDGVERARPAPSSSback to top mRNA from alignment at Ecto-sp6_S_contig103:620506..629366+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.929.1 ID=mRNA_Ecto-sp6_S_contig103.929.1|Name=mRNA_Ecto-sp6_S_contig103.929.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8861bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:620506..629366+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:620506..629366+ >mRNA_Ecto-sp6_S_contig103.929.1 ID=mRNA_Ecto-sp6_S_contig103.929.1|Name=mRNA_Ecto-sp6_S_contig103.929.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:620506..629366+ (Ectocarpus species6 EcLAC_371)back to top |