mRNA_Ecto-sp6_S_contig103.923.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: D7G0Y7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y7_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 7.950e-175 Identity = 303/518 (58.49%), Postives = 351/518 (67.76%), Query Frame = 1
Query: 7 AALRIAVETKMVIENLKVWGHSPLFTVEPGGFLRLESGEFSTPPEGGTTRDTKSRLRVEMGGEF*VWGKTWFTKSAITFMRPCTKDRSWIRNNRRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPPFYLPFGPKVSAGHTFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTAVEATEAAEDFDEHETKT-AVPDITADGVDPDNERLQLKTLVTADPTPAMAALMRRAAMTVGGGFTWSAEEEFDAALRKERSRMRDKVLGRPANGQVEEKEGAPGKSPPTKNDEGYGGDDNGDPR*RTGTKIGGVTSGTSSKKEAGNAADNGLTDPEISNTGISCGRASGRRMPWGR*RMNWNAEVAVDSDGPQPDWGDDMSPRPVTWR*---ASRGKP*LTWPTCARRRREAGSETTLGSSTRAGRLGMPFVATATADERTAATATPPTAF----TTVSIDYSLHVVEKACEVRLEGEFVWGRYTDSL*RLL 1536
AALRI+V +M IEN+K SPL V+PGG LRLE +F TPPEGGT DT SR+R+E GGE VWG+ WFTKSAIT M+P K+ SWI NN RRN W +WNR PPF PFGPK+S G++FWERFDISP YLKVGEELRYPSSMTS MDGSVLS+GADGTLLHAT DR+ HF LE+KTAVEA EAA D +EH KT +VPDITADGVDPDN+RLQL+TLV ADP AMAALM R TVGGG TW+A+EEFDA LR+E SRMRD +LGR ANGQ EEK+G G+SPPTK DE G DNGDPR + GGVT GTSSKKE GNAADNGLTDP+I+NTG +CGRAS RRMPWGR RM WNAEVAVDSDGP P WGD + + G+ + + ++ + ++G F + + ++ + P + T VS DYSLHVVEK EVRLEGEFVWG YTDS+ R L
Sbjct: 155 AALRISVR-QMSIENIK-GDTSPLLRVDPGGLLRLEIHDFGTPPEGGTMTDTNSRVRIEEGGEVQVWGEPWFTKSAITLMKPFKKEPSWILNNMRRNHAHWQRQRWNRQQQQKMTGGQHAGGGTTGKPQ--PPFCSPFGPKISEGYSFWERFDISPSYLKVGEELRYPSSMTSLMDGSVLSMGADGTLLHATADRRTHFHLEMKTAVEAAEAASDLEEHARKTKSVPDITADGVDPDNKRLQLQTLVAADPAKAMAALMGRPGTTVGGGPTWAADEEFDATLRREWSRMRDTLLGRTANGQAEEKKGGLGQSPPTKTDEADGSGDNGDPRQHK--ETGGVTGGTSSKKETGNAADNGLTDPDINNTGNTCGRASRRRMPWGRKRMKWNAEVAVDSDGPLPYWGDGTVLKVTETGDVVVSIAGEIVIEMANPRKAKKGGWFRNHVRKHNPIRKVGDAFRRHLHSRRKGSSNSDPSDSVHDTDTIVSTDYSLHVVEKGFEVRLEGEFVWGWYTDSIGRPL 666
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: D7G0S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S1_ECTSI) HSP 1 Score: 248 bits (633), Expect = 3.170e-74 Identity = 141/222 (63.51%), Postives = 146/222 (65.77%), Query Frame = 1
Query: 244 MRPCTKDRSWIRNNRRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPPFYLPFGPKVSAGHTFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTAVEATEAAEDFDEHETKTAVPDITADGVDPDNERLQLKTLVTADPTPAMAALMRRAAMTVGGGFTWSAEEEFDAALRKERSRMRDKVLGRPANGQV 909
MRPCTK RSWIRNN+RRNEV GEELRYP SMTSRMDGSVLS+GADGTLLHATEDRQNHFRLE+KT VEA EAAED DEHETKTAVPDITAD VDPDNERLQ KTLV ADP A+AALMRR AMTVGGG TWSAEEEFDAALRKE SR+RDKVLGR ANGQV
Sbjct: 1 MRPCTKGRSWIRNNKRRNEV--------------------------------------------------------------GEELRYPPSMTSRMDGSVLSMGADGTLLHATEDRQNHFRLEMKTVVEAAEAAEDLDEHETKTAVPDITADSVDPDNERLQPKTLVAADPATAIAALMRRPAMTVGGGLTWSAEEEFDAALRKEWSRLRDKVLGRTANGQV 160
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE) HSP 1 Score: 100 bits (249), Expect = 7.830e-18 Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 1
Query: 37 MVIENLKVWGHSPLFTVEPGGFLRLESGEFSTPPEGGTTRDTKSRLRVEMGGEF*VWGKTWFTKSAITFMR-PCTKDRSWIRNNRRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPPFY----LPFGPKVSAGHTFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTA 624
M++ENL+ S +FT+EP G++ L + PE GT +D S + ++ GGE V + +T S++ + P KD WI+ R R RW Q+ + XXXXXXXXX P Y PF P+ A +TF ER ++P YL GEELR+PS MTS V+++G+DG+L+ A R + R E+K A
Sbjct: 1137 MLVENLE-GDSSEIFTIEPEGYVGLHPTAWGPLPEDGTKKDAHSLVNIKKGGELFVGAEVRYTASSMKVAKTPVAKDLVWIQLQRLRR--RWLEQQYQQRLXXXXXXXXXEDGDRGASAAAGSPPYGDDLSPFSPERYAKYTFEERLKLTPTYLMAGEELRFPSRMTSLDRRHVMTVGSDGSLVLANIARYHGLRREVKRA 1334
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: D7G9G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G6_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 3.260e-17 Identity = 84/251 (33.47%), Postives = 118/251 (47.01%), Query Frame = 1
Query: 7 AALRIAVETKMVIENLKVWGHS-PLFTVEPGGFLRLESGEFSTPPEGGTTRDTKSRLRVEMGGEF*VWGKTWFTKSAITFMRPCT-KDRSWIRNNRRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPPFYLPFGPKVSAGHTFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTAVEATEAAEDFDEHETKTAVPDITADGVDPDNERLQLKTLVTAD 753
A L AV + +++E L+ G S +FT+EPGGFL + + PE GT +D S L + GGEF +T S+IT + +D +WIR R R RW + RH PF P SA +T+ +R + P +L VGEELR+PSS+T+ +++G DG+L+ A DR E+ AVE + E+ PD DG DP L+LK L AD
Sbjct: 678 ATLSFAVAS-LLVEKLE--GDSGEIFTIEPGGFLGGQFDQLRPLPENGTKKDEHSLLHAKEGGEFYFDALVRYTSSSITMVAVSVIEDPAWIRLQRLRR--RWIERHFQRHQQQS-----------------------PFSPDRSAEYTYEQRLGLKPTHLMVGEELRFPSSLTTLDRSHTMTMGTDGSLVLAKADRYVVLFDEMIEAVETRASVEETTMATLAGLSPDY--DGGDPG---LELKILALAD 895
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 4.780e-16 Identity = 99/249 (39.76%), Postives = 134/249 (53.82%), Query Frame = 1
Query: 76 LFTVEPGGFLRLESGEFSTPPEGGTTRDTKSRLRVEMGGEF*VWGKTWFTKSAIT-FMRPCTKDRSWIRNN-----RRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPP------FYLPFGPKVSAGHTFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTAVEATEAAEDFDEHETKTAVPDITADGVDPDNERLQLKTLVTADPTPAMAALMRR 786
+FTVEP G++ L + P+ G+ D S + V+ GGEF +T S ++ + P ++ SW+R + R R ++ +H XXXXXXXXXXXXXXXXXXX PP F F P SA HTF +R +SP Y+ VGEELR+PS+MTS + V+++G DG+LLH R FR E+ AVE + E+ PD DG D +R LK L ADP AM ++ R
Sbjct: 1214 IFTVEPQGYVGLHAHGQGPVPQDGSEEDNNSLVHVQTGGEFFFDCHARYTTSGMSAVLIPYPENPSWMRLHVLSRLRTRRQLE------QQHHXXXXXXXXXXXXXXXXXXXTTPPSTTAGEFSSLFSP--SAQHTFQDRQLLSPSYITVGEELRFPSTMTSLDEKHVMAMGFDGSLLHTGPQRYRFFREEMVQAVENRPSGTLSTENILSGLNPDY--DGGD---QRADLKVLAAADPAQAMRSIPGR 1449
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 8.250e-16 Identity = 106/272 (38.97%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 7 AALRIAVETKMVIENLKVWGHSPLFTVEPGGFLRLESGEFSTPPEGGTTRDTKSRLRVEMGGEF*VWGKTWFTKSAIT-FMRPCTKDRSWIRNN-----RRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPP------FYLPFGPKVSAGHTFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTAVEATEAAEDFDEHETKTAVPDITADGVDPDNERLQLKTLVTADPTPAMAALMRR 786
A LR V T V + V G +FTVE G++ L + P+ G D S + V+ GGEF +T S ++ + P ++ SW+R + R R ++ +H XXXXXXXXXXXXXXXXXX PP F F P SA HTF +R +SP Y+ VGEELR+PS+MTS + V+++G DG+LLH R FR E+ AVE + E+ PD DG DP R LK L ADP AM + R
Sbjct: 1192 AKLRFGVSTMRVEKLEGVSG--AIFTVERQGYVGLHAHGQGPTPQDGYEEDNNSLVHVQTGGEFFFDCHARYTASGMSAVLIPYPENPSWMRLHVPSRLRARRQLE------QQHHXXXXXXXXXXXXXXXXXXGTTPPSSTVGEFSSLFSP--SAQHTFQDRQLLSPSYITVGEELRFPSTMTSLDEKHVMAMGFDGSLLHTGPQRYRFFRDEMVQAVENRPSGTVSTENILSGLNPDY--DGGDP---RADLKVLAAADPAQAMRSFPGR 1448
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Match: A0A6H5JJM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM2_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 2.010e-10 Identity = 99/267 (37.08%), Postives = 135/267 (50.56%), Query Frame = 1
Query: 7 AALRIAVETKMVIENLKVWGHSPLFTVEPGGFLRLESGEFSTPPEGGTTRDTKSRLRVEMGGEF*VWGKTWFTKSAIT-FMRPCTKDRSWIRNN-----RRRNEVRWTWGQWNRHXXXXXXXXXXXXXXXXXXXXXXPPFYLPFGPKVSAGH-TFWERFDISPLYLKVGEELRYPSSMTSRMDGSVLSIGADGTLLHATEDRQNHFRLEIKTAVEATEAAEDFDEHETKTAVPDITADGVDPDNERLQLKTLVTADPTPAMAALMRR 786
A LR V T M +E L+ + +FTVEP G++ L + P G+ DT S + V+ GGEF +T S ++ + P ++ SW+R + R R ++ +H XXXXXXXXXXXXXXXXXXX PP +AG +FW VGEELR+PS+MTS + V+++G DG+LLH R FR E+ AVE + ++ PD DG +P R LK L ADP AM + R
Sbjct: 184 AKLRFGVST-MRVEKLEGISGA-IFTVEPQGYVGLYAHGQGPVPHDGSEEDTNSLVHVQTGGEFFFDCHARYTASGMSAVVIPYPENPSWMRLHVLSWLRTRRQLE------QQHHXXXXXXXXXXXXXXXXXXXTTPP-------STTAGEFSFWPGSGCL-----VGEELRFPSTMTSLDEKHVMTMGFDGSLLHTGPQRYRFFRDEMVQAVENRPSGTLSTQNILSGLNPDY--DGGEP---RADLKVLAAADPAQAMRSFRGR 425 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.923.1 >prot_Ecto-sp6_S_contig103.923.1 ID=prot_Ecto-sp6_S_contig103.923.1|Name=mRNA_Ecto-sp6_S_contig103.923.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=251bp MRPCTKDRSWIRNNRRRNEVRWTWGQWNRHHQQQQQRSGAQPASATTARKback to top mRNA from alignment at Ecto-sp6_S_contig103:487005..493080- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.923.1 ID=mRNA_Ecto-sp6_S_contig103.923.1|Name=mRNA_Ecto-sp6_S_contig103.923.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6076bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:487005..493080- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:487005..493080- >mRNA_Ecto-sp6_S_contig103.923.1 ID=mRNA_Ecto-sp6_S_contig103.923.1|Name=mRNA_Ecto-sp6_S_contig103.923.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:487005..493080- (Ectocarpus species6 EcLAC_371)back to top |