mRNA_Ecto-sp6_S_contig103.922.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 587 bits (1512), Expect = 8.440e-210 Identity = 283/297 (95.29%), Postives = 289/297 (97.31%), Query Frame = 1 Query: 295 GYDGGDCCECTCEGDDDDYKCMQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 GYDGGDCCECTCEGDDDDYKCMQFSCIDPNAPCV+DDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFGEET GNGDDS GRSSDP TEY+FVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVR GRSSGEVGCGEAGGNGCAA NARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYAD+TFNTLGVTANEANTVML+SVSLLSNEWISLIEV + +T Sbjct: 9 GYDGGDCCECTCEGDDDDYKCMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFVT 305
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 572 bits (1475), Expect = 6.910e-201 Identity = 279/373 (74.80%), Postives = 315/373 (84.45%), Query Frame = 1 Query: 91 AYDGGDCCSCTCQSPLDDDYACDSFACIDPGAACVNDDDITVDMFENCGYVLGLGNGYCDENNNTEECGYDGGDCCECTCE-------GDDDDYKCMQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGED-AFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 AYDGGDCCSCTC+SP DDD+ C FACIDP AACV+DDDITVDMFENC Y + +GNG+CDE NN E CGYDGGDCCECTCE DD DY CM+F+CIDP+APCVDDDDITVDM +NCGYVSGIG+GWCD NNNKE CGYDGGDCCSCTCES +DDDY+C + FDCKDP+A+CFGEE PTG+ D S + D Y+FVPWE+TE LPTVD AVEVGTKTEV VS+TAHDVRPG SSG+ GCGE GG GC ATN RDGI +EIESRWSCA KL+DDEGPCQIEF+FAEPQ I+DIQVAFWKGNER RTLEV++NGE+THTHESYADATFNTLGVTA + +TVML+SV+LLS+EWISLIEV + +T Sbjct: 146 AYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEE-PTGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVT 514
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 546 bits (1408), Expect = 1.560e-187 Identity = 265/367 (72.21%), Postives = 310/367 (84.47%), Query Frame = 1 Query: 91 AYDGGDCCSCTCQSPLDDDYACDSFACIDPGAACVNDDDITVDMFENCGYVLGLGNGYCDENNNTEECGYDGGDCCECTCEGD-DDDYKCMQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGED-AFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 AYDGGDCC+CTCQ+ +DDD+ FACIDP AACVNDDDITVDMF NC Y + +G+G+CD+ NN E CGYDGGDCCECTCE + D+DY+CM+FSCIDP+APCV+DDD+T+DM +NCGYVSGIG+GWCD NNNKE CGYDGGDCCSCTC+S +DDDY+C + +FDC+DPSA+CFGE T TG+ D S P + Y+FV WE+T+ LPTV DAVEVGTKTEV VSATAHD+RPG S G+VGCGE GG GC ATN RDGI ++IESRWSCA L+ DEGPCQIEF+FAEPQNIVDIQVAFW NERV TLEV+VNGELTHTHESY D TFNTLGVTA EA+TVML+SV+LLS+EWISL+EV + +T Sbjct: 372 AYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCENERDEDYRCMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGT-TGSDDFSFHDDYQPMS-YEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDD-TFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVT 735
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 506 bits (1303), Expect = 3.530e-175 Identity = 255/375 (68.00%), Postives = 291/375 (77.60%), Query Frame = 1 Query: 94 YDGGDCCSCTCQSPLDDDY------AC-DSFACIDPGAACVNDDDITVDMFENCGYVLGLGNGYCDENNNTEECGYDGGDCCECTCEGDDDDYKC---MQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCG-EDAFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 YDGGDCC CTC+ P DDD+ AC + FACIDP A CVNDDDITVD+ E+C V G+G+GYCD +NN C YDGGDCCECTCE ++ KC F+CIDP APCVDDD +TVDM DNC Y+ +G+GWCD NN E C YDGGDCC CTCES W+DDYTC E F+CKDP+A+CFGEET G D P + Y+FVPWE+TE LPTVD AVEVGTKTEV VS+TAHDVRPG + GCGE GG GC A N RDGI +EIESRWSCA KL+DDEGPCQIEF+FAEPQ IVDIQVAFWKGNER RTLEVY+NGE+THTHESYADATFNTLGVTA + +TVML+SV+LLS+EWISLIEV + +T Sbjct: 125 YDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAV-GMGDGYCDMDNNNAACAYDGGDCCECTCEPNN---KCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEET---TGSDDFSTDDQPMS-YEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVT 487
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 508 bits (1309), Expect = 5.150e-175 Identity = 260/401 (64.84%), Postives = 293/401 (73.07%), Query Frame = 1 Query: 139 DDDYACDSFACIDPGAACVNDDDITVDMFENCGYVLGLGNGYCDENNNTEECGYDGGDCCECTCE-------GDDDDYKCMQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGED-AFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEV-------------------------------------------------YVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEV 1170 DDD++C FACIDP AACV+DDDITVDMFENC Y L +G+G+CDE NN E CGYDGGDCCECTCE DD DY C +FSCIDPNA CV DDDITVDMF+NCGYVSGIG+GWCD NNNKE CGYDGGDCCSCTC+S +DDDY C + FDC+DP+A+CFGEE+ G D +P + Y+FVPWE+TE LPTVD AVEVGTKTEV VSATAHDVR GRSSG+VGCGE GG GC ATN RDGI +EIESRWSCA KL+DDEGPCQIEF+FAEPQ I+DIQVAFWKGNER RTLEV ++NGE+THTHESYADATFN LGVTA + +TVML+SV+LLS+EWISLIEV Sbjct: 62 DDDWSCTRFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEES---TGSDDYSTDDEPMS-YEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 497 bits (1279), Expect = 2.220e-166 Identity = 258/422 (61.14%), Postives = 293/422 (69.43%), Query Frame = 1 Query: 127 QSPLDDDYACDSFACIDPGAACVNDDDITVDMFENCGYVLGLGNGYCDENNNTEECGYDGGDCCECTCE-------GDDDDYKCMQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGED-AFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEV------------------------------------------------------------------YVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEV 1170 Q+ DDD++C FACIDP AACV+DDDITVDM ENC Y L +G+G+CD+ NN E CGYDGGDCCECTCE DD DY C +FSCIDPNA CV DDDITVDMF+NCGYVSGIG+GWCD NNNKE CGYDGGDCCSCTC+S +DDDY C + FDC+DP+A+CFGEE+ G D +P + Y+FVPWE+TE LPTVD AVEVGTKTEV VSATAHDVR GRSSG+VGCGE GG GC ATN RDGI +EIESRWSCA KL+DDEGPCQIEF+FAEPQ I+DIQVAFWKGNER RTLEV ++NGE+THTHESY DATFN LGVTA + +TVML+SV+LLS+EWISLIEV Sbjct: 420 QNIYDDDWSCTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEES---TGSDDYSTDDEPMS-YEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 837
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 458 bits (1179), Expect = 1.220e-154 Identity = 252/422 (59.72%), Postives = 289/422 (68.48%), Query Frame = 1 Query: 94 YDGGDCCSCTCQSP-LDDDY------------------ACDS-FACIDPGAACVNDDDITV--------------------------------DMFENCGYVLGLGNGYCDENNNTEECGYDGGDCCECTCEGD-DDDYKCMQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNN--NKEACGYDGGDCCSCTCESVWD--DDYTCGEDA-FFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 YDGGDCC CTC +P +DD+ AC FACIDP AACVNDDDITV DM ENC Y G+G+GYC++ NN E C YDGGDCC CTC+ D DDD+ C F+CIDP A CV+DDDITVDMF NC Y IG+GW GYDGGDCCSCTC++ WD DDY+C + DCKDP+A+CFGE T TG+ D + P T Y+FV WE+TE LPTV DAVEVGTKTEV VSATAHDVRP SS +VGCG+ GG GC ATN RDGI ++IESRWSCA L+ DEG CQIEFSFAEPQN+VDIQVAFWKGNER RTL V+VNGELTHTHESYAD+TFNTLGVTA EA+TVML+SV+LLS+EWISL+EV + +T Sbjct: 191 YDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGT-TGSDDFTFHDDYQP-TSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEVLIFVT 610
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 2.130e-139 Identity = 202/277 (72.92%), Postives = 234/277 (84.48%), Query Frame = 1 Query: 358 MQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGED-AFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 M+F+CIDP+APCVDDDD+TVDM +NCGYVSGIG+GWCD NNNKE CGYDGGDCCSCTC+S +DDDY+C + +FDC+DP+A+CFGE T TG+ D S P + Y+F+ WE+TE LPTV DAVEVGTKTEV VSATAHDVRPG S +VGCGE GG GC ATN RDGI ++IESRWSCA L+ DEGPCQIEF+FAEPQNIVDIQVAFW NERV TLEV+VNGELTHTHESY D TFNTLGVTA EA+TVML+SV+LLS+EWISL+EV + +T Sbjct: 1 MEFACIDPSAPCVDDDDVTVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPTASCFGEGT-TGSDDFSFHDDYQPMS-YEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDD-TFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVT 274
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 407 bits (1046), Expect = 2.200e-134 Identity = 216/370 (58.38%), Postives = 261/370 (70.54%), Query Frame = 1 Query: 94 YDGGDCCSCTCQSPLDDDYACDS--------FACIDPGAACVNDDDITVDMFENCG-YVLGLGNGYCDENNNTEECGYDGGDCCECTCEGDDDDYKC--MQFSCIDPNAPCVDDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEV 1170 YDGGDCCSCTCQ P DDD D FACIDP A CVNDDDITVDM + CG + + G+G+CD++NN +ECGYD GDCC CTC D Y+C + F C+DP+A CVDDD + + D+CG + +G+CD +NNKE C YDGGDCC CTCE +D + + FDC+DP+A CF EE +D G S YDF+ ++ + L DAVEVGTKT+VSVSATA+D RPG SSG+VGCGEAGGNGC+ N RDGIS E ESRWSCA+K++ GPCQIE+ F EPQ+I DI+VAFW G+ERVRTLEVY +G L THESYA +TFN+LGV+A TVML+SV LL NEWISLIEV Sbjct: 266 YDGGDCCSCTCQVP-DDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCV--DGTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCTSGFDCQDPTAPCFDEEPTLPEKEDDDGSMS-----YDFL--DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 333 bits (853), Expect = 1.070e-110 Identity = 168/235 (71.49%), Postives = 189/235 (80.43%), Query Frame = 1 Query: 484 KEACGYDGGDCCSCTCESVWDDDYTCG-EDAFFDCKDPSAACFGEETPTGNGDDSIGRSSDPYTEYDFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRPGRSSGEVGCGEAGGNGCAATNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADATFNTLGVTANEANTVMLKSVSLLSNEWISLIEVCVLLT 1185 K YDGGDCC CTCES W+DDYTC E F+CKDP+A+CFGEET G D P + Y+FVPWE+TE LPTVD AVEVGTKTEV VS+TAHDVRPG + GCGE GG GC A N RDGI +EIESRWSCA KL+DDEGPCQIEF+FAEPQ IVDIQVAFWKGNER RTLEVY+NGE+THTHESYADATFNTLGVTA + +TVML+SV+LLS+EWISLIEV + +T Sbjct: 10 KTKLSYDGGDCCECTCESAWNDDYTCSSEHGIFNCKDPNASCFGEET---TGSDDFSTDDQPMS-YEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVT 236 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.922.1 >prot_Ecto-sp6_S_contig103.922.1 ID=prot_Ecto-sp6_S_contig103.922.1|Name=mRNA_Ecto-sp6_S_contig103.922.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=395bp CLHPTRKQLTPPLLPLSLSARPRSVSRIAAAYDGGDCCSCTCQSPLDDDYback to top mRNA from alignment at Ecto-sp6_S_contig103:477038..480374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.922.1 ID=mRNA_Ecto-sp6_S_contig103.922.1|Name=mRNA_Ecto-sp6_S_contig103.922.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3337bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:477038..480374+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:477038..480374+ >mRNA_Ecto-sp6_S_contig103.922.1 ID=mRNA_Ecto-sp6_S_contig103.922.1|Name=mRNA_Ecto-sp6_S_contig103.922.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1185bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:477038..480374+ (Ectocarpus species6 EcLAC_371)back to top |