mRNA_Ecto-sp6_S_contig103.920.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig103.920.1
Unique Name	mRNA_Ecto-sp6_S_contig103.920.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

[Close]

BLAST of mRNA_Ecto-sp6_S_contig103.920.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE)

HSP 1 Score: 1061 bits (2743), Expect = 0.000e+0
Identity = 615/749 (82.11%), Postives = 637/749 (85.05%), Query Frame = 1

Query:    7 AAKQLSKTTNNFTNINKLARPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVRAYGGIQSFRKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTEACILSNDGSGGISIEEYVYFCSREGVPRSVAETTFFQADIDGNGQISFEEWTAMMMGRVGRDKDSFNCGGHHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRGGLESGSASAPGQTKKKVKKKVKGGTKETGGTKKVKKKVVA-----------APAGEEGKAKVXXKVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTKVKKKATTAARPPTEAPPQQQEPFQSIPTPLVHVAAAPLPRAFAWVEAAAVQTSSDSFDCRLRHGLTLYTVPFGLPIACDWCGASVPPGYPAVGCRACDVDGCLDCAARSLTPSAGDGS--GSALALTCPGGHGLTMAAAVPGCACDLCGCGVGAGSKVFSCRLCDMDACVSCIWRDHRRRPQQAEKLGRVNATPAAATPEXXXXXXXXXXXXSYGTIGAPSPRNDGQAAAVAMPPYHGMPAGGVAAVAGPPKYGELKTPSQARSPPSYDDLFVRGSGGNNGTNAPTXXXXXXXXXXXXXXXXXXPPPFAFDSVVKVLGVDDPRTDGKLMTVIGFEPCPRGGAGIVVLQRKRKVVRVPTANVFNVVG 2214
            AAKQLSK TN  TN+NKLA+PTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVT L EIAAELLDQGLCAGLVANPGMI EAV+AVV AYGGIQSFRKNVKNFAQFS ALSKQLN DGKTQTNGR MDSAEHLYTMFT+AC   +DGSGGIS+EEYVYFC REG+PRSVAETTFFQADIDGNGQISFEEWTAMM+GRVGRD+DSFNCGGHHGLVQYVAV+NGMACDFCG PIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPR GLESGSASAPGQTKKK KKK KGGTKET GTKKVKK V             A +G    AKV   VA   X  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTKVKKKAT A RPPTEAPP QQ+PFQS P   VHVAAAPLPRA AW  A  VQT  DSFDCRLRHGLTLYTVPFGLP+ACDWCGAS+P GYPAVGCRACDVDGCLDCAARSL PSAGDGS  GSAL LTCPG HGLTMAAA PGC CDLCGCGVGAGSKVFSCRLCDMDACVSCIWRDHRRR QQAEK+GRVN TPAAAT +            SY TIG PS RND QAA+VAMPPYHGMPAGGVAAVA PPKY E+ T SQARSPPSY D+ V GS          XXXXXXXXXXXXX     PPPFAFDSVV+VLGVDDPRTDGKLMTV+GFEPCP+GG GIVVLQRKRKVVRVP  NVFNVVG
Sbjct:    8 AAKQLSKATNKLTNVNKLAKPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTTLVEIAAELLDQGLCAGLVANPGMIFEAVQAVVSAYGGIQSFRKNVKNFAQFSEALSKQLNADGKTQTNGRAMDSAEHLYTMFTQACC-DSDGSGGISVEEYVYFCGREGIPRSVAETTFFQADIDGNGQISFEEWTAMMIGRVGRDEDSFNCGGHHGLVQYVAVFNGMACDFCGAPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRDGLESGSASAPGQTKKKAKKKGKGGTKETVGTKKVKKVVATGEGKTKVKKQVAASGXXXXAKVNKXVAAPAXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTKVKKKATPAPRPPTEAPPPQQQPFQSRPPARVHVAAAPLPRASAWEVATTVQTWPDSFDCRLRHGLTLYTVPFGLPVACDWCGASLPLGYPAVGCRACDVDGCLDCAARSLMPSAGDGSVSGSALGLTCPGLHGLTMAAAGPGCVCDLCGCGVGAGSKVFSCRLCDMDACVSCIWRDHRRRSQQAEKVGRVNTTPAAATSQPRPSPAVPPPP-SYDTIGPPSTRND-QAASVAMPPYHGMPAGGVAAVAEPPKYEEVTTSSQARSPPSYADISVTGSX----XXXXXXXXXXXXXXXXXXDEEVEPPPFAFDSVVRVLGVDDPRTDGKLMTVVGFEPCPKGGEGIVVLQRKRKVVRVPAENVFNVVG 749

[Close]

BLAST of mRNA_Ecto-sp6_S_contig103.920.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI)

HSP 1 Score: 1029 bits (2661), Expect = 0.000e+0
Identity = 636/748 (85.03%), Postives = 641/748 (85.70%), Query Frame = 1

Query:    1 MNAAKQLSKTTNNFTNINKLARPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVRAYGGIQSFRKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTEACILSNDGSGGISIEEYVYFCSREGVPRSVAETTFFQADIDGNGQISFEEWTAMMMGRVGRDKDSFNCGGHHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRGGLESGSASAPGQTKKKVKKKVKGGTKETGGTKKVKKKVVAAPAGEEGKAKVXXKVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTKVKKKATTAARPPTEAPPQQQEPFQSIPTPLVHVAAAPLPRAFAWVEAAAVQTSSDSFDCRLRHGLTLYTVPFGLPIACDWCGASVPPGYPAVGCRACDVDGCLDCAARSLTPSAGDGSGSALALTCPGGHGLTMAAAVPGCACDLCGCGVG--AGSKVFSCRLCDMDACVSCIWRDHRRRPQQAEKLGRVNATPAAATPEXXXXXXXXXXXX----SYGTIGAPSPRNDGQAAAVAMPPYHGMPAGGVAAVAGPPKYGELKTPSQARSPPSYDDLFVRGSGGNNGTNAPTXXXXXXXXXXXXXXXXXXP----PPFAFDSVVKVLGVDDPRTDGKLMTVIGFEPCPRGGAGIVVLQRKRKVVRVPTANVFNVVG 2214
            MNAAKQLSKTTN FTNINKLARPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVV AYGGIQSFRKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTE     +DGSGGISIEEYVYFCSREGVPRSVAETT                WTAMMMGRVGRDKDSFNCGG+HGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRGGLESGSASAPGQ KKKVKKKVKGGTKETGGTKKVKKKV AA  GE GK   XX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTK KKKAT AARP            QSIP PLVHV  APLPRAFAWVEAAAVQTSSDSFDCRLRHGLTLYTVPFGLP+ACDWCGASVPPGYPAVGCRACDVDGCLDCAARSLTPSAGD                                     AGSKVFSCRLC+MDACVSCIWRDHRRRPQQAEKLGRVN TPAAATPEXXXXXXXXXXXX    SY TIGAPSPRNDGQAAAVAMPPYHGMPAG VAAVAGPPKYGEL T SQARSPPSY DLFVRG GGN G NAPT XXXXXXXXXXXXXXXXX     PPFAFDSVV+VLGVDDPRTDGKLMTVIGFEPCPRGGAGIVVLQRKRKVVRVPTANVFNVVG
Sbjct:    1 MNAAKQLSKTTNKFTNINKLARPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVSAYGGIQSFRKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTEC---DSDGSGGISIEEYVYFCSREGVPRSVAETTXXXXXXXXXXXXXXXXWTAMMMGRVGRDKDSFNCGGNHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRGGLESGSASAPGQPKKKVKKKVKGGTKETGGTKKVKKKV-AASGGEAGKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTKAKKKATPAARPXXXXXXXXXXXXQSIPPPLVHVGEAPLPRAFAWVEAAAVQTSSDSFDCRLRHGLTLYTVPFGLPVACDWCGASVPPGYPAVGCRACDVDGCLDCAARSLTPSAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSKVFSCRLCNMDACVSCIWRDHRRRPQQAEKLGRVNTTPAAATPEXXXXXXXXXXXXXXXXSYDTIGAPSPRNDGQAAAVAMPPYHGMPAGVVAAVAGPPKYGELTTSSQARSPPSYGDLFVRGPGGNGGPNAPTDXXXXXXXXXXXXXXXXXXDEEVPPFAFDSVVRVLGVDDPRTDGKLMTVIGFEPCPRGGAGIVVLQRKRKVVRVPTANVFNVVG 744

[Close]

BLAST of mRNA_Ecto-sp6_S_contig103.920.1 vs. uniprot
Match: D8LIB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB4_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 5.000e-22
Identity = 77/235 (32.77%), Postives = 112/235 (47.66%), Query Frame = 1

Query:   79 LSQLSKFRNGGSAA--YWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVRAYGGIQSFRK-NVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTEACILSNDGSGGISIEEYVYFCSREGVPRSV-AETTFFQADIDGNGQISFEEWTAMMMGRVGRDKDSFNCGGHHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCS 771
            ++ L+  R   SA+  Y  YK FQA + C GD + +A++  ELL  G CA     P +++ +  +V+  Y G    RK ++ +F +F+  L+ +L     TQ   + M  A+ +Y +F EA     D SG IS +E+  F S   V     A                F EW    +   GRD +SFNC G HGL    A  +   C++CG+   AG     CR CDCDAC  C+
Sbjct:    1 MASLNANRGAASASTVYDPYKIFQAAQRCMGDPSVVAKVLVELL--GDCA----TPDVLMASAASVLEIYYGGGGLRKTSMTDFGKFAGELADELGARNSTQAEEK-MKEAQSVYELFEEA---DTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCAAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECA 225

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig103.920.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig103.920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K5X6_9PHAE	0.000e+0	82.11	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
D7G0S5_ECTSI	0.000e+0	85.03	Calcium dependent protein kinase n=1 Tax=Ectocarpu...	[more]
D8LIB4_ECTSI	5.000e-22	32.77	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig103	contig	Ecto-sp6_S_contig103:458126..465039 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3465
Hectar predicted targeting category	other localisation
Exons	8
Cds size	2217

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig103.920.1	prot_Ecto-sp6_S_contig103.920.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig103 458126..463791 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348743.4066608-CDS-Ecto-sp6_S_contig103:458125..458278	1682348743.4066608-CDS-Ecto-sp6_S_contig103:458125..458278	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 458126..458278 +
1682348743.4177058-CDS-Ecto-sp6_S_contig103:458930..459110	1682348743.4177058-CDS-Ecto-sp6_S_contig103:458930..459110	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 458931..459110 +
1682348743.4276261-CDS-Ecto-sp6_S_contig103:459471..459584	1682348743.4276261-CDS-Ecto-sp6_S_contig103:459471..459584	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 459472..459584 +
1682348743.4356222-CDS-Ecto-sp6_S_contig103:460270..460383	1682348743.4356222-CDS-Ecto-sp6_S_contig103:460270..460383	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 460271..460383 +
1682348743.4447541-CDS-Ecto-sp6_S_contig103:461045..461223	1682348743.4447541-CDS-Ecto-sp6_S_contig103:461045..461223	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 461046..461223 +
1682348743.453596-CDS-Ecto-sp6_S_contig103:461617..461813	1682348743.453596-CDS-Ecto-sp6_S_contig103:461617..461813	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 461618..461813 +
1682348743.4633543-CDS-Ecto-sp6_S_contig103:461903..462571	1682348743.4633543-CDS-Ecto-sp6_S_contig103:461903..462571	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 461904..462571 +
1682348743.4728596-CDS-Ecto-sp6_S_contig103:463175..463791	1682348743.4728596-CDS-Ecto-sp6_S_contig103:463175..463791	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig103 463176..463791 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348743.4853358-UTR-Ecto-sp6_S_contig103:463791..465039	1682348743.4853358-UTR-Ecto-sp6_S_contig103:463791..465039	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig103 463792..465039 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig103:458126..465039+
coding sequence from alignment at Ecto-sp6_S_contig103:458126..465039+

protein sequence of mRNA_Ecto-sp6_S_contig103.920.1

>prot_Ecto-sp6_S_contig103.920.1 ID=prot_Ecto-sp6_S_contig103.920.1|Name=mRNA_Ecto-sp6_S_contig103.920.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=739bp
MNAAKQLSKTTNNFTNINKLARPTKDLSQLSKFRNGGSAAYWGYKAFQAL
RLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVRAYGGIQSF
RKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTEACILSND
GSGGISIEEYVYFCSREGVPRSVAETTFFQADIDGNGQISFEEWTAMMMG
RVGRDKDSFNCGGHHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDC
DACATCSGLPTTPAPPPQLPPRGGLESGSASAPGQTKKKVKKKVKGGTKE
TGGTKKVKKKVVAAPAGEEGKAKVKKKVAAPAGEEGKAKVKKKVAAPAGE
GGKSKVKKKVAAPAGEAGKTKGTKVKKKATTAARPPTEAPPQQQEPFQSI
PTPLVHVAAAPLPRAFAWVEAAAVQTSSDSFDCRLRHGLTLYTVPFGLPI
ACDWCGASVPPGYPAVGCRACDVDGCLDCAARSLTPSAGDGSGSALALTC
PGGHGLTMAAAVPGCACDLCGCGVGAGSKVFSCRLCDMDACVSCIWRDHR
RRPQQAEKLGRVNATPAAATPEPSPSPAVPPPPPSYGTIGAPSPRNDGQA
AAVAMPPYHGMPAGGVAAVAGPPKYGELKTPSQARSPPSYDDLFVRGSGG
NNGTNAPTDDDDDDDDDDDASDEEVEPPPFAFDSVVKVLGVDDPRTDGKL
MTVIGFEPCPRGGAGIVVLQRKRKVVRVPTANVFNVVG*

mRNA from alignment at Ecto-sp6_S_contig103:458126..465039+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig103.920.1 ID=mRNA_Ecto-sp6_S_contig103.920.1|Name=mRNA_Ecto-sp6_S_contig103.920.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6914bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:458126..465039+ (Ectocarpus species6 EcLAC_371)
ATGAATGCCGCCAAGCAGCTTTCCAAGACCACGAACAACTTCACCAACAT
CAACAAGCTGGCGAGGCCGACCAAGGACCTCAGCCAGCTCTCCAAGTTTA
GGAATGGTGGATCGGCCGCGTACTGGGGCTACAAAGCCTTCCAGGCCCTC
AGGGTAACACCAAACATTGTTGTGGTTGTTGTTGTTGTTGTTGTTGTTGC
AGTGGTTGTACGGTAGCTTTGCCACCGTTGAAAGCGCTGAGGCCTTTCAG
GCGCTGACAATATTGTTGTTGAGGTGGTGGTGGTAGCTTTGCAACCGTTG
AAGGTTTTCAAGACATTTCAGGCGCTCAGGGTAGCAACAGTTGTTGTTGT
TGTCCCGGTGGCTTTGGCTCTGCAACCGCTCCGTTCATCACGAACGAACG
TATTTGTGATGCTGCGATGGCAGAGCACACACCCCTGTGGCCGAGGTATC
AGGCCATCGATAATTTCCTCCCAGGAATGAGACAAACCGGGCACAAGTGT
GTTCGGAGTGCTTTTCTTAAGGAGAAGTTCCATACGTACAGGAGTTGGAC
CTCAGGTACAGCTCGCTTGTGCAGAACCGCTCCATTCAGTCCAGCATGGC
CGTGGCATAGACACACGGGGTGACACACCGCTATCATCAAACGCAAGGCA
CACATCCATCCACGGTTGCAGGATGCTGCTGTTGTTGTTGCTGCCGCATT
CAGCGCCCAGAGGGGGGATTTCGTGAATTGACATGGTAAGTCTCTCCATC
CGATTCAATCCCCTAACGAAACATACATGCGAACGGCCGCGCTTCTTGTG
CACAGCTGTGTTCCGGTGACGTCACCGCCTTGGCCGAGATCGCCGCGGAG
CTCCTCGATCAAGGACTCTGCGCGGGGCTGGTCGCTAACCCCGGAATGAT
CTTGGAAGCCGTGGAGGCCGTCGTGCGTGCGTACGGGGGCATCCAGTCCT
TCAGGAAGAATGTCAAGAACTTCGCGCAATTCTCGGTGAGAGTTGTAAAG
ATTGCCCGTAGATATGCGTACCATACGACGTCCGTTTTTTTCGCATGTGC
GGGTTAGTCGCGTCCTAGGGTTGGTAGCGTCCTACCCCGTACGCTCTTGC
TTAACTCAGCTCACGCTTGTTTCTCGGTAGGCCACCCAGGGTCCGTCCAC
CTGGATGTTCTCGTCGAAACCTAATGCAACCACGAACGATGGCTGTGTTT
TTTCGTGTTTTTACGTCCATCAAGGCCAGATATATATGCTTGACCTCAGC
GCTATTGAAGCCGCAGGGTTTGATTTTCACGTGCGGCGTTCGTTTCTGTT
GCCACCGCTGTGTATGCAATGACCGGCCTCCTCTGACGTTGTACAGGCGG
CGCTCTCGAAGCAGCTCAACGGTGACGGAAAGACCCAGACGAATGGGAGG
ACCATGGACTCGGCGGAACATCTCTACACCATGTTCACGGAGGCATGTAT
TCTTAGCAAGTAGTCGATATATACACGTGCCACACACGTGTTTTCTTATT
GTTGCGCGTCGTCCACTTGGAGCCGGAAGTTTCCGAGCATCCTTCCCGGG
AGAACGTGGAAAACCCGCGATTTTTTTTGTTTCGTTTGTCACGTGAAGCG
GGTCGTTGAGTTGTAAACGAAAACGCCACTTCTTCGCTATGAAACCGGTT
ACAGATGATGGTATCAGAGATTGAGTTGGACCTCTCCTCCCTCGAACGCT
GAGAAAGGTGGGAGAGTTCTTGTGGCGAGGACAACACGTACGTATACCAG
TAGGTATCGTACGAAGAGACCACAAACCGCAAGTAACAGTTTCACGATGT
CCTGGCATGGGAGTCCAGATTTATTCCAAGGTCCTTCCAAGTTGACGCTC
ATCATCTCTTCCAGTGCTTGCTCCCGACGCATCTTGAGCTGTCGCCGCGA
AGAGTTGCTCGCCGAATGTACTTTTCAATTCTCACCCCGCTTTTCTCCGT
ACATGGTACCACTCGTTTTTCAGCGCGGCAGCGTTTCCGCGCGTCGTATT
TTTCTTAAGCCCGTGGCGTACCCGCGGGTGTTGTAGGTACGAAGCGTTTT
TGGTGTTTTTTTTTTTCCCGTCTGATCAAGCTTCGTGGCGCCCCTGCCTC
TTTTCGCTGTTTGCGTGTGCGTGACTTTACTTTGCAGTGCGACAGCGATG
GTTCAGGAGGCATTTCGATCGAAGAATACGTGTACTTCTGCAGCCGGGAG
GGGGTTCCCAGGAGCGTGGCCGAGACCACCTTCTTCCAGGCGGATATAGA
CGGAAACGGTACGGAAGAGACCGTACCCCCCCCTCAACCCTTAGGATAGA
TCGGATAGCAAAAACGTATTTGAGTCACCTTTGGCAAGGCAGGAAGGAAC
GACTGACCATCGGTGATCGGTCCTGTGGGAACAATGTTCCGTCCTGTCGA
GAGGACACGTGGTCAACAGTCTACCAGCTACGGCGTGCAAAAAAACGACC
CCTACAGTAGGGCCTGAAGTTCTCGCTTCTGTGTATGCCCCGCCCGCGTA
AAGTCGTGTACGTAGTTACCTTCGGTCAGGGCAGAATTTTGTTCGAGGAG
GAGACGTCGGTGCTGCGGTGGGCGGATCAACAATATGATTTATTTCGAAA
ACTCAAGGGCCATGAGAACGTGAAACCTGCCGGTTCTGCTGCTGCTGTTG
CTCTGCGCTGATCTATCTCCCCGTGCATGCTTTGGGAAACCTCTGGTTGT
GCTTGCCACCTTTTTTGTAGCACAACTCTGCTACTCGACGCTGATTTATC
TCCGTGTCTCTGCTTTGGGAAACCTTGGGTTGTACTTGTCTTTTTTCGTT
TTTTGTTTCGTTGATAGGGCAAGCAACCTCGTTCAAGAAATTTCTCGCGA
GCTGATCTATTTATCTCCCCGTCCATAATTTGGGAAACCTTGGGTTGTAC
GTGCCATTTTTccGTCGTAGGGCAAATATCGTTCGAGGAATGGACGGCGA
TGATGATGGGGAGGGTGGGTCGAGATAAGGACAGCTTCAACTGCGGCGGC
CACCACGGCCTGGTCCAATACGTGGCCGTCTACAACGGAATGGCCTGCGA
CTTCTGCGGGACTCCGATCCAGGCGGGCTTCTTTGCCAAGGGCTGCAGGT
CAGCTCACATGAAAGTTACCACACACACACACACAAAGCACACACAGCGG
AAGGACAAATAACCGGAGGGAGAATAGTGGTTAACAACGTCGGGTGTCGA
CCTGGGTTTGCTTTCCTGGTTTGCCGCCGTTTGATCCGGGCAGGCTTCAG
TAATCAAACTCAACCTCTTCATTTTCATTGTGCGCCCCCCCCCCTCCGTG
GTCAATGGTCAAATGACTACGGCAAGCAACAAATGAGTACGCCCCCCCCC
CCCCTCCGCCTTGCTTCGTTCTTGCGCGCAGCCGGCCAGCCGGCCACCTG
GTAACATCTCTGATGGCCGCAACCCATCCCGCCGTATGTTGTCCCCCCCC
TTTTTTTGTGCCCCCCAATCGTTGTTGCCTGAAATCATCCAGGCGATGCG
ATTGCGATGCTTGCGCTACTTGCTCCGGGCTGCCGACAACGCCAGCGCCC
CCCCCGCAGCTCCCCCCCCGGGGCGGCCTCGAATCCGGATCTGCCTCTGC
GCCAGGACAAACCAAGAAAAAGGTCAAGAAAAAGGTTAAGGGGGGGACAA
AGGAGACGGGGGGGACGAAAAAAGTGAAGAAAAAGGTGGTGGCATCAGGA
GAAGAAGGGAAGGCGAAGGTGAAGAAAAAGGTGGCGGCGCCAGCAGGAGA
AGAAGGGGAGGCGAAGGTGAAGAAAAAGGTGGCGGCACCAGCAGGAGAAG
AAGGAAAGGCGAAGGTGAAGAAAAAGGTGGCAGCACCAGCAGGAGAAGAA
GGGAAGGCGAAGGTGAAGAAAAAGGTGGCAGCACCAGCAGGAGAGGGAGG
GAAGTCGAAGGTGAAGAAAAAGGTGGCAGCACCAGCAGGAGAAGCAGGGA
AGACGAAGGGGACAAAAGTTAAGAAAAAGGCGACCACAGCGGCCCGGCCT
CCGACGGAGGCACCGCCGCAGCAGCAGGAGCCGTTCCAAAGCATACCGAC
CCCTCTCGTGCACGTAGCAGCAGCCCCGTTGCCGCGGGCTTTCGCGTGGG
TGGAAGCGGCCGCCGTGCAGACGTCGTCCGACTCCTTCGATTGCCGCCTG
CGGCACGGCCTGACCCTCTACACCGTGCCTTTCGGTCTCCCAATTGCCTG
CGACTGGTGCGGCGCGTCCGTTCCCCCCGGCTACCCCGCCGTAGGGTGCC
GGGCGTGCGACGTCGATGGGTGCTTGGATTGCGCGGCGAGAAGCCTGACG
CCATCGGCGGGAGACGGGAGCGGCAGCGCGCTTGCGCTGACGTGCCCCGG
TGGGCATGGGTTGACGATGGCGGCGGCGGTTCCCGGCTGCGCGTGCGATC
TGTGCGGCTGCGGCGTCGGCGCGGGGTCGAAGGTTTTCAGCTGCAGGTAA
TGAGCGGGGCGTGGGTTATTGTTCGGGGATATCGTCTGTCTGTACCTGTT
CTGCTGCTGCCCTGCTTAGAGCGTGTTGTCGACATCGAATCTGCGGCGAT
ATTTTCGGTCCAAGAGATTTTATTTTTTTGCGTTGCTTCAGACTTTCGAG
AAATGTACGTACCAGTTTCCAGTCGTTGCCTGTTCACCTGTCTGTCTGTG
GAGACCCTTCGGCCTCTTGGCGGTTTTCCCTAGCTTGGCCTGAATCCCAT
GTTAGCAAGCCTTATTCTGTAGGGTGCGTTGAGAAGAATGCTTGACGTAT
TTTGGTGTGCTAGTTATCCGTACCTCCTCCATTTTCACGCGATCGGTGCC
AAAAATGAATGTCTGTGCCTGAACAGAACCCAGCCTTGCCTTGCGATTCC
TCCCAAAGAAGAACAATGCCAATCTTGCAACGGGAAGACTCGAACACGCA
CGCATACACAGAAAGAGCTTTTCCTCGGTGTGACTCCGTATCGCAGGCCA
GCCAGTTTGTAGTGATGGCACCACCACGATTGGTAAATTCGGCACGCGAA
AGGTGCGATGAATCCACAACAGTTGCTCTTGCCCCGCTTCGACTGTGTAG
GCTATGCGACATGGATGCTTGCGTCTCCTGCATCTGGAGAGACCACCGCC
GCCGGCCGCAGCAGGCCGAGAAGCTTGGACGGGTAAACGCCACCCCCGCC
GCGGCGACCCCTGAACCAAGCCCATCGCCGGCGGTGCCGCCGCCGCCGCC
GAGCTACGGCACCATCGGCGCACCTTCACCACGCAACGATGGCCAAGCTG
CCGCTGTTGCGATGCCACCGTATCACGGGATGCCGGCCGGCGGTGTGGCG
GCGGTTGCAGGGCCGCCCAAGTATGGAGAATTGAAGACGCCGAGTCAAGC
CCGTTCACCCCCCTCATACGACGACCTTTTCGTGAGGGGATCAGGAGGAA
ACAACGGCACTAACGCACCAACTGATGATGATGATGATGATGATGATGAT
GATGATGCCTCCGACGAGGAAGTGGAACCCCCCCCCTTCGCCTTTGATTC
GGTGGTGAAGGTGCTTGGCGTGGACGATCCGCGGACCGACGGAAAGCTCA
TGACGGTGATCGGCTTTGAGCCCTGCCCCAGGGGCGGAGCGGGGATCGTC
GTGCTCCAGAGGAAGCGTAAGGTTGTGAGGGTCCCCACCGCAAACGTTTT
CAACGTGGTCGGTTGATTGGTTGGGCGGCGTGGTGGTCGGCTCTTGGTGG
TCGACTCTTGGTGGTTGGTTGAAGTGACCATGGTCTAAACCACGCGAGCA
GGGAGAAGACGTTGTGAGAGTCCAGGCGGTCGGCTAGCAATGCGTACGAC
GCTCAGCGTTGCGACAGTAGATTATATTTCATTGTTACGAAACAACGCAA
TGGATTCAATTCGTCTCTTTTCCACAGGGAAAAAAGGGTTTAGGCTGTAT
TCTAGCACTGAGGCTAGTTCCACTCATGGAACAAAGAATCTAGCCTGAAT
TCTACTGTTAGGAGAAGCAGTACGCAGTTGCGTTTGCATTCAATTGTTAC
TACGGTAGTCTTATGTATGTGAGATCGAGCATCCAAACAACAGGTCAATA
CTACTATTCTAATGTAGCAACGACCGTCATCGCTCAACACCACGTTTGTC
GGATAGTTGGTGATGACGCGAAACAATATAAAGGGGTGCGTTGTGATAGC
TCGGCGTTTTTCTGCAGTAGTAGTACTGGTCGTTAGGATAGTTCAAGAAT
ATAGTTGGCACTGTAATGGAATGAATGTGTTCGGATACGGCCAGTCGGGG
GAATGAAGTGGGGGGGAATACTGCTAAATACACAACGTTGGGCAAACAGG
GAGAATACTCTGTGAGAGTCCAGGCGGTCGGTTAGCAGTGCGTACGACGC
TCAGCATTGCGGCAGTAGATGTTTTTTTGTTGTTTTACCCAAACGCAACG
GATTTAGCTTTCCACAGGGAAAAAAGGGTTAGGGTTACGTAGGCTTTATT
CTTGAGAGGTTAGTTCCACTCATGGAGAAAAAAGTCTATCGTCTAAATTC
TACTGTAGGTGCAGCAAACGTAGTAGTTAGTTGCATTTTTTTTGGGGGGG
GGTATGTTCTTGCGCCGGCCTGTATATAGCAAAGGTAGATATTGGAAGCA
TACAGTTGTAGTTCTTCCTATTGACTATACCTTGGCATGTAGCGCCTCAA
TTTTAAAACGAACTATTGTAGGTACTCCTGCACTACTTTGCTGCCGCAGT
GTAGACTATATGCGTAGATATGCGGCCGTGTGTCGTGTAACAAACTCAAG
GTTCGGAGTTCAATAGTTTCTCGTCTTTCTTAGATATGCATAGAACACGC
GACTGGCTGCCGGCCACTTTCTGCATACTTTGTATTCCGGATAGGACCTG
AGGCAGAATGAACGCCATACAATAGGTCAAAAATATCAAATATCCACCAT
CCATATGCAGTGTT

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:458126..465039+

>mRNA_Ecto-sp6_S_contig103.920.1 ID=mRNA_Ecto-sp6_S_contig103.920.1|Name=mRNA_Ecto-sp6_S_contig103.920.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2217bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:458126..465039+ (Ectocarpus species6 EcLAC_371)
ATGAATGCCGCCAAGCAGCTTTCCAAGACCACGAACAACTTCACCAACAT
CAACAAGCTGGCGAGGCCGACCAAGGACCTCAGCCAGCTCTCCAAGTTTA
GGAATGGTGGATCGGCCGCGTACTGGGGCTACAAAGCCTTCCAGGCCCTC
AGGCTGTGTTCCGGTGACGTCACCGCCTTGGCCGAGATCGCCGCGGAGCT
CCTCGATCAAGGACTCTGCGCGGGGCTGGTCGCTAACCCCGGAATGATCT
TGGAAGCCGTGGAGGCCGTCGTGCGTGCGTACGGGGGCATCCAGTCCTTC
AGGAAGAATGTCAAGAACTTCGCGCAATTCTCGGCGGCGCTCTCGAAGCA
GCTCAACGGTGACGGAAAGACCCAGACGAATGGGAGGACCATGGACTCGG
CGGAACATCTCTACACCATGTTCACGGAGGCATGTATTCTTAGCAACGAT
GGTTCAGGAGGCATTTCGATCGAAGAATACGTGTACTTCTGCAGCCGGGA
GGGGGTTCCCAGGAGCGTGGCCGAGACCACCTTCTTCCAGGCGGATATAG
ACGGAAACGGGCAAATATCGTTCGAGGAATGGACGGCGATGATGATGGGG
AGGGTGGGTCGAGATAAGGACAGCTTCAACTGCGGCGGCCACCACGGCCT
GGTCCAATACGTGGCCGTCTACAACGGAATGGCCTGCGACTTCTGCGGGA
CTCCGATCCAGGCGGGCTTCTTTGCCAAGGGCTGCAGGCGATGCGATTGC
GATGCTTGCGCTACTTGCTCCGGGCTGCCGACAACGCCAGCGCCCCCCCC
GCAGCTCCCCCCCCGGGGCGGCCTCGAATCCGGATCTGCCTCTGCGCCAG
GACAAACCAAGAAAAAGGTCAAGAAAAAGGTTAAGGGGGGGACAAAGGAG
ACGGGGGGGACGAAAAAAGTGAAGAAAAAGGTGGTGGCGGCACCAGCAGG
AGAAGAAGGAAAGGCGAAGGTGAAGAAAAAGGTGGCAGCACCAGCAGGAG
AAGAAGGGAAGGCGAAGGTGAAGAAAAAGGTGGCAGCACCAGCAGGAGAG
GGAGGGAAGTCGAAGGTGAAGAAAAAGGTGGCAGCACCAGCAGGAGAAGC
AGGGAAGACGAAGGGGACAAAAGTTAAGAAAAAGGCGACCACAGCGGCCC
GGCCTCCGACGGAGGCACCGCCGCAGCAGCAGGAGCCGTTCCAAAGCATA
CCGACCCCTCTCGTGCACGTAGCAGCAGCCCCGTTGCCGCGGGCTTTCGC
GTGGGTGGAAGCGGCCGCCGTGCAGACGTCGTCCGACTCCTTCGATTGCC
GCCTGCGGCACGGCCTGACCCTCTACACCGTGCCTTTCGGTCTCCCAATT
GCCTGCGACTGGTGCGGCGCGTCCGTTCCCCCCGGCTACCCCGCCGTAGG
GTGCCGGGCGTGCGACGTCGATGGGTGCTTGGATTGCGCGGCGAGAAGCC
TGACGCCATCGGCGGGAGACGGGAGCGGCAGCGCGCTTGCGCTGACGTGC
CCCGGTGGGCATGGGTTGACGATGGCGGCGGCGGTTCCCGGCTGCGCGTG
CGATCTGTGCGGCTGCGGCGTCGGCGCGGGGTCGAAGGTTTTCAGCTGCA
GGCTATGCGACATGGATGCTTGCGTCTCCTGCATCTGGAGAGACCACCGC
CGCCGGCCGCAGCAGGCCGAGAAGCTTGGACGGGTAAACGCCACCCCCGC
CGCGGCGACCCCTGAACCAAGCCCATCGCCGGCGGTGCCGCCGCCGCCGC
CGAGCTACGGCACCATCGGCGCACCTTCACCACGCAACGATGGCCAAGCT
GCCGCTGTTGCGATGCCACCGTATCACGGGATGCCGGCCGGCGGTGTGGC
GGCGGTTGCAGGGCCGCCCAAGTATGGAGAATTGAAGACGCCGAGTCAAG
CCCGTTCACCCCCCTCATACGACGACCTTTTCGTGAGGGGATCAGGAGGA
AACAACGGCACTAACGCACCAACTGATGATGATGATGATGATGATGATGA
TGATGATGCCTCCGACGAGGAAGTGGAACCCCCCCCCTTCGCCTTTGATT
CGGTGGTGAAGGTGCTTGGCGTGGACGATCCGCGGACCGACGGAAAGCTC
ATGACGGTGATCGGCTTTGAGCCCTGCCCCAGGGGCGGAGCGGGGATCGT
CGTGCTCCAGAGGAAGCGTAAGGTTGTGAGGGTCCCCACCGCAAACGTTT
TCAACGTGGTCGGTTGA