mRNA_Ecto-sp6_S_contig103.918.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: D7G0S6_ECTSI (Similar to ubiquitin specific peptidase 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S6_ECTSI) HSP 1 Score: 1528 bits (3955), Expect = 0.000e+0 Identity = 826/886 (93.23%), Postives = 830/886 (93.68%), Query Frame = 1 Query: 52 MSEEGVPAATPAPEVQREMIAEAMKLEMKQGQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVKPEDVADVAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLGEGRELRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSVRVQLYSRAKTMRQICADVKSSLNLTPRVDTRLSLKKLEEAEQAGTAGGXXXXXTGSGAGSTEGAEDDGWQAIHLEEVSQSLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKKWYEATVGEVKHEDGKRLLYIEVSENDVGSQWMPEDSEEICKAHTHINKALPARTHN--------------------------------------RSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXX--LLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLEFPLPSSYSSEKGXXXXXXXXXXXXXXXXXXXXXXTSSQSTGEADGKPVTSGGVDAGAG 2589
MSEEGVPAA PAPEVQREMIAEAMKLEMKQGQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVK EDVA VAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLGEGRELRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSV VQLYSRAKTMRQICADVKSSLNLTPRVDTRLSLKKLEEAEQ GTAGG TGSGAGSTEGAEDDGWQAIHLEEVSQSLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFES VTEVDVDGDP+QVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKKWYEATVGEVKHE GKRLLYIEVS+NDVGSQWMPEDSE+ICKAHTHINKALPARTH RSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFR+QHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXX LLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLEFPLPSS SSEKGXXXXXXXXXXXXXXXXXXXX TSSQSTGEADGKPVTSGGVDAGAG
Sbjct: 1 MSEEGVPAAPPAPEVQREMIAEAMKLEMKQGQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVKAEDVAGVAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLGEGRELRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSVSVQLYSRAKTMRQICADVKSSLNLTPRVDTRLSLKKLEEAEQ-GTAGGAAAAATGSGAGSTEGAEDDGWQAIHLEEVSQSLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESRVTEVDVDGDPEQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKKWYEATVGEVKHEHGKRLLYIEVSDNDVGSQWMPEDSEDICKAHTHINKALPARTHKYATLTPSRIIFCPLKWCRVTNPHVCHGPPQYPHPAVSGRSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRSQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLEFPLPSSCSSEKGXXXXXXXXXXXXXXXXXXXXGQTSSQSTGEADGKPVTSGGVDAGAG 885
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: A0A8J2SNQ1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNQ1_9STRA) HSP 1 Score: 391 bits (1005), Expect = 2.690e-112 Identity = 280/800 (35.00%), Postives = 392/800 (49.00%), Query Frame = 1 Query: 67 VPAATPAPEVQREMIAEAMKLEMKQ--GQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVKPEDVADVAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLG--EGRE--LRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSVRVQLY--SRAKTMRQICADVKSSLNLTPRVDTRLSLKKLEEAEQAGTAGGXXXXXTGSGAGSTEGAEDDGWQAIHLEEVSQ-----SLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKKWYEATVGEVKHEDGKRLLYIEVSENDVGSQWMPEDSEEICKAHTHINKALPARTHNRSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQH-----WKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQL 2412
+P + P QR + + + +Q G V+YVL KWW WR V ++ +S + SS+D +A LSL R SS E GPGPI N LG G E LRE L+E +DY LL RA++LL WYG FK VV + + LT+E+FP+RF V DG A S VQL + + R+ D +T R + R+ +K + G G G D W+ + + + S+HE + LVE++ + + +PRD +WR +++ GD+IDA+DS+ WF+S + EVD D +VKVH+ GWS +WD + R E++Q T T WR+ L+V E+ E WY+ V EV DG R+L + N V QW+ SE ICK THI + RS R++ + +P RGAVGL NLGNTCFMNSMLQCL T L+ YF + R++NE NPLG GG +A AYA DAWSG YS V P+ +K+ VS + F+GYQQ D+ ELM LLDG+HEDLN + +KPY+E ++S G D +A+ESWRR+ +RN SV++D C G L+SH+TC +C S+ FDPY +SLPLP A V RP++V V +Q +TV LK A+ + + L L + +VW RV++ D+ + +K D+ +L
Sbjct: 1 MPGSPPPTTEQRRAVKDVLDGPERQRLGDVYYVLSQKWWAAWRQHVAYE------------KSDSSSSLD------------------------LAGLSL-----------TRTSSVEE--GPGPITNEPLGVSAGSEFILREGLVERDDYALLPERAWDLLTRWYGRDYEFKALVVQ--GASSSDLTLEVFPLRFDVRIVSEDGAASGPSNSVQLSRSDKVSSARRALEDA-----VTGRGERRVWVKPASDESFEGEKTGAPRSLKADFWG------DSDWRLLEGDRDAMVGGIPSIHEDR-ECPRWGALVESRTSGE------WPRDLQREKWRAHIRVGDVIDAKDSEGRWFDSRIVEVDRD----RVKVHYNGWSSRWDSWVDRKDESIQPHLTHTDDWRR-LKVGDALEMRG-PGEKALWYKGFVKEV---DGSRVLVSSHTPN-VDRQWLETSSEHICKLGTHIKAERDPKPFARSYSSSARPG-------RSHVRGQPPARGAVGLQNLGNTCFMNSMLQCLSHTRPLTDYFLRDEEGEPFYVRQINEKNPLGSGGDLARAYASFIRDAWSGSYSTVTPSALKRAVSGWKSQFSGYQQQDSQELMMALLDGLHEDLNEIIQKPYVEQLESKGEPDHELAKESWRRFGLRNKSVVMDHCMGQLKSHITCDKCGHESILFDPYNHISLPLPAAGARRVTCTLFKKHSSQRPLKVIVAVQSKDTVGALKQALAKVAS-----------------LDGSALDLCDVWGHRVYRTFSDNFSVEHIKANDELVAFEL 697
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: A0A7S2W2S4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2S4_9STRA) HSP 1 Score: 387 bits (994), Expect = 7.370e-110 Identity = 293/832 (35.22%), Postives = 408/832 (49.04%), Query Frame = 1 Query: 91 EVQREMIAEAMKLEMKQGQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVKPEDVADVAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLG---EGRELRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYT----------------------CLPDGRADEDSVRVQLYSRAKTMRQICADVKSSL-NLTPRVD----TRLSLKKLEEAEQAGTAGGXXXXXTGSGAGSTEGAEDDGWQAI---HLEEVSQSLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSS---CRNEVKKWYEATVGEV-----KHEDGKRLLYIEVSENDVGSQWMPEDSEEICKAHTHINKALPARTHNRSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSA-GRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTA-----VMVKVLFHPLPYGS---RPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLA-------VMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLE 2415
E ++++I E + W V+ +KWW WR + FDD +E G L E + E +E+ L P I+N L EG ELR + E DY LL YE L+AWYGGGP F+R VV+ + + VEL+P+RF VY + +DE RVQ +R++ +V+S L L R + +S K+ + E A GS +GS E A D W + L+ ++HE + + Q +LVET+ + D FPRD I WR L G L+DA DSDK WFES V +V+ D +VK+H+LGWS KWD + R S L LH+ TT WRQ+L EV+ + +W+ T+ +V ++ R + I +S+ + + W+ SE +C+ TH T NR +Y + R + +P+ GAVGL NLGNTCFMNSMLQC+ T L+ +F +K ++N N LG GGK+ AY+ L WS YS + P K V+ ++AP FAGYQQHD+ E MSFL+DGIHEDLNRV KKPY E V+ G+ D VA E+WRR+L+RNDSV+VD C GLLRSH+ CP+C SVTFDPY SLSLPLP + ++ V F PLP RPM++ T+ TVRDL A+ + P++ TED +A V ++W +V K ++ PL +++ TD V ++E
Sbjct: 15 ESEKQIILALWPTEGADVRDWNVISAKWWASWRLYTGFDD-------------------EEAGGLKVEEPIG--------QEDADSEVDLPPQ-------------------PDVINNDDLASSVEG-ELRRGMTEFYDYELLPQPIYEQLQAWYGGGPSFQRRVVN---PLQQEPYVELYPIRFEVYRFASRRNDASEASQPHQGSESWLAILHFHSDESMDRVQ----GGILRRLNFEVRSPLVRLWIRAGGESASGMSAKESDPIEMQDPA-----LRGGSSSGSAEDA--DSWTPLTDADLDLRRVTVHEFLEEVQVAKILVETRTSPDEP----FPRDMISNGWRSALGVGALLDALDSDKRWFESQVVDVEED----RVKIHYLGWSSKWDAWVPRGSPDLLPLHSRTTMWRQELGKGDDIEVADRVVSDTKTHRWHFGTIIKVGKLSPPNKLSSRKVIIRISDA-LETPWVDMGSELVCQVGTH--------TKNRRNENQRMNRNNAYIWGRASVTGEPVASGAVGLINLGNTCFMNSMLQCVAQTPLLTPFFLEGKFKGDLNRRNALGTGGKLTEAYSELLKKIWSSSYSTLAPKEFKAVLGKHAPQFAGYQQHDSQEFMSFLMDGIHEDLNRVKKKPYTEVVEGGDGKPDEEVANEAWRRHLLRNDSVIVDHCEGLLRSHLVCPKCKHESVTFDPYMSLSLPLPTASRRAARNTVLSVTFVPLPSKGGKLRPMDL--TVPSRGTVRDLTLAVAREL--VGPEA------------TEDAVAEQAARCRVCDIWQHKVHKILKLRSPLVEIRATDVTVVYEVE 752
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: A0A7R9YEL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEL1_9STRA) HSP 1 Score: 372 bits (956), Expect = 1.920e-107 Identity = 272/832 (32.69%), Postives = 395/832 (47.48%), Query Frame = 1 Query: 133 MKQGQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVKPEDVADVAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLGEGR---ELRETLMEGEDYVLLHNRAYELLEAWYGG-GPRFKRWVVSLGDD-ARTQLTVELFPVRFMVYTCLPDGRADEDSVRVQLYSRAKTMRQI-CADVKS-------SLNL---TPRVDTRLSLKKLEEAEQAGT---------------AGGXXXXXTGSGAGSTEGAEDDGWQAIHLEEVS----QSLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTE-VDVDGD-PQQVKVHFLGWSEKWDEVLKRSSEA----LQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKK-WYEATVGEVKHE-----------------------DGKRLLY-IEVSENDVGSQWMPEDSEEICKAHTHI-NKALPARTHNRSXXXXXXXXXGSYGFYRTNT--KAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLEFP 2421
++ G+ +YV+ S WW+LW + ++D K ++DG+ + E PG I NR L ELR L+E +DY +L RAY+ LE++YG P F R + G ++ + VEL+PVR + +G E YS RQ+ +DV+ L L T R+ KK + AG G TE AE++ + E+ + + L + + +LVE +D++ + +PR +L W+L LKAGD IDA+D+D WFE+ V + GD ++ VH++GW EKW+E SE + K +T WR + V + E+ + WY+ TV E++ E DGKRLL V E++ +W+ E IC+ TH+ +KA A T S SYGF +++ + KP GAVGL NLGNTCFMNSMLQC+ T L+ +F N W+ +VN+ NPLGM GK+A YA D W G ++VV P T+K+ V + P FAGY Q D+ E MSFLLDG+HEDLNR H+KPY E V+S GR D VA+E WRR+L+RNDSV+VD C GLLRSH+TC +C +S+TFDP+ SLSLPLP + V ++ P P + V +Q + + D+K I ++ + ++ L V W+ ++ K + D PLS+++ +DD V +L P
Sbjct: 35 LRAGEKYYVIPSGWWRLWCGYTKYDAGKR----------------EDDGMEICSE------------------------------------------APGAIPNRELSAPNAPDELRPGLVEDQDYKILPERAYKQLESYYGADSPAFCRNAIDTGKTFGQSNVIVELYPVRSRIRLVEQNGYPAES------YSDTLLSRQLRISDVEDLIMKEAGGLGLPKGTFARTCRVWYKKAVDEPGAGDDKDVNSDGFVVVDEHTNGHDVPNGEQSDQETEDAEEEQLSYVLFEKSAGVGTRLLDLIDAGPVRLDILVEFRDST----TAPWPRAAVLNAWKLRLKAGDEIDAKDTDGKWFEAVVIRRTEKGGDVADELNVHYMGWGEKWNEDFPLDSEEHLARISKRNTKVEYWR-NFSVGDQVELKDWMQPKRATWYQGTVKEIREESETLPTRKDGKLIEPLPESEKDLDGKRLLIGASVKESNSHLRWVAAKGESICQFGTHLQSKAKEASTPKNSYSSYSGY---SYGFNYSDSGVRGKPPIAGAVGLKNLGNTCFMNSMLQCISHTPQLTGFFLNGGWRDDVNKSNPLGMQGKLATVYADFLKDVWGGNHTVVAPTTLKRTVGTFNPTFAGYAQQDSQEFMSFLLDGLHEDLNRNHEKPYTEQVESKGRPDEEVAKEQWRRHLLRNDSVVVDNCHGLLRSHLTCCKCGYNSITFDPFLSLSLPLPVNNTRRVDLVVMPAALSENPYRMTVDMQTNACLGDVKRWIAEQTG-----------------VDQERLVVTSTWNHKMLKNLRDKHPLSEVRDSDDIFVHELSEP 777
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: A0A6S8CHP7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CHP7_9STRA) HSP 1 Score: 369 bits (946), Expect = 7.260e-107 Identity = 244/647 (37.71%), Postives = 340/647 (52.55%), Query Frame = 1 Query: 427 PGPIDNRTLGEGRE-LRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTC-LPDGRADEDSVRVQLY--SRAKTMRQICADVKSSLNLTPRVDT--RLSLKKLEEAEQAGTAGGXXXXXTGSGAGSTEGAEDD--GWQAIHLEE-VSQSLHEVMGDTQSVALLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSE-ALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKKWYEATVGEVKHEDGKRLL--YIEVSENDVGSQWMP---------EDSEEICKAHTHINKA-LPARTHNRSXXXXXXXXXGSYGF-----------YRTNT-------------KAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRN-QHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAI 2226
PGPI N L + R LR ++E +DYV++ N ++L++ WYGGGP KR ++S GD ++ VR ++ PD + + + SR T+ Q + + + ++T R+ +K E GG S AE D W I ++Q+L+ ++ + LVE K + ++PRD + RWRL +K+GD+IDA+DS+ WF+S V +V Q+ VHF GW+ +WD + R E ++Q L T TT WR+ + CE+ S + WYEA V EV D ++ Y+ V G Q + SE + K THI +A P + N S + Y+T T K P GAVGLSNLGNTCFMNSMLQCL T+ L YF N + + E+NEDNPLG GG +A AYA D+WSG+Y+++VP +KK V Q A F GYQQ D+ E MS+LLDG+HEDLNRV KKPY+ET++S GR D+VVA ESW R+ +RN S+++DT GLLRSH+TCP C S+TFDPY +LSLPLP + + GSRP + V L +T+ LK +
Sbjct: 61 PGPISNEPLFDERGMLRIDVVENDDYVVIPNGVWKLIQGWYGGGPAIKRRLLS-GDVPHLEIHFIRVEVRLVIQDSGEPDSALSSSNHKNTIIELSRLDTIEQGWLSIVKATGMKEIMNTAVRVWVKPAERDHFVPATGGLHDEAFWRRTKSILDAEKDIESWSMIDTSSNMNQTLNSLLSEGLRWGALVECK-IGGKTSRYAWPRDALKHRWRLRIKSGDIIDAKDSEGRWFDSVVRQVKE----VQIHVHFRGWAARWDTWVDRFDEDSIQPLFTHTTNWRK-FKKGDACEIRSEEEKRALWYEARVLEVYPSDDPKIKDDYVLVQAMIAGHQTLSGPSKPRKLSTQSESLAKMGTHIKRARTPIQQSNNHYLSSSSSGKLSPSYTNTTQTISSRSYKTTTSRFLSQSYGRPHHKGTPPAPGAVGLSNLGNTCFMNSMLQCLSHTKQLREYFLNAERVQSELNEDNPLGSGGNIARAYADFISDSWSGDYAIIVPTILKKAVGQQASQFLGYQQQDSQEFMSYLLDGLHEDLNRVRKKPYIETLESNGRPDQVVANESWDRFQLRNKSIIIDTFYGLLRSHITCPNCGHESITFDPYNTLSLPLPSAKIRRITITLSRAD-GSRPTKYLVQLSSRDTITQLKQGL 699
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: A0A7S1XMK1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMK1_9STRA) HSP 1 Score: 347 bits (891), Expect = 2.080e-95 Identity = 260/851 (30.55%), Postives = 389/851 (45.71%), Query Frame = 1 Query: 67 VPAATP--APEVQREMIAEAMKLE-MKQGQVWYVLGSKWWQLWRAFVRFDDTKEPPPSAAATESATPSSMDEDGVLVKPEDVADVAVKADTNEHRVAELSLEEGGNSSGGGGERASSFTERAGPGPIDNRTLGEGR---ELRETLMEGEDYVLLHNRAYELLEAWYGGG-PRFKRWVVSLGDD-ARTQLTVELFPVRFMVYTCLPDGRADEDSVRVQLYSRAKTMRQICADVKSSLN--LTPRVDT---------RLSLKKL--EEAEQAGTAGGXXXXXT-----------GSGAGSTEGAEDDGWQAIHLEEVSQSLHEVMGDTQSVA-LLVETKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVT-EVDVDGDPQQVKVHFLGWSEKWDEVL----KRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKK-WYEATVGEVKHED--------------------------GKRLLYI-EVSENDVGSQWMPEDSEEICKAHTHINKAL---PARTHNRSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQL 2412
VPA+ P P + + E M+ + M QG ++V+ +WWQ W + +++ +E +MD G ER PGP++ L EL+ L+E DY LL Y LE WYG PRF+R ++ + VEL+PVR V +G+ + V L SR T+ + + + + + R D R+ K + E AE A G G+ A + E +E++ + ++ S S + D + +E + + +PR+ +L W+L LK GD IDA D++ NW+E+ V ++DG VKVHF+GW +WD+ + +++ + K + WR + V E+ +N WY + +++ E GKRLL + S+ + +W+ E ICK +TH+ + R S G+YG Y + T+ +P GAVGL NLGNTCFMNSMLQC+ T L+++F W+++VN+DNPLGM GK+A YA D W G ++VV P +K+ V + P FAGY Q D+ E MSFLLDG+HEDLNR KPY E V+S GR D VA E WRR+L+RNDSV+VD C GLLRSH+TC +C+ S+TFDP+ SLSLPLP V + + RP ++ V ++ + D+K I + + + L + +VW +V K D PLS+++ DD +L
Sbjct: 10 VPASEPRVTPAAEANAVRELMRNKTMGQGDQYHVISFRWWQAWVQYTGYEEPQE-------------DTMDTSG--------------------------------------ER---------PGPLNAAELVSPTFEAELKPALVEDYDYKLLPLAVYNKLEGWYGAEQPRFQRTAINRASQPGLVDVIVELYPVRGRVGIVGDNGQPTGEYEYV-LLSRQLTVAVAQSRITTVADSMIKRRADNPNGVVPMWRRIWYKSVFDEPAETADAGDGERADVNSDGYVVVNEENGAAADNAEESEEEALAYVLFDDKSASTRATLLDLLDAGPVRLEIRAEYKGSFDDPWPRESVLNAWKLRLKQGDEIDAVDTEGNWYEALVMGREEIDG-KINVKVHFMGWGHRWDDDIDVTDSKAASRITKRNVQVEFWR-NFAVGDNVELKDHKNNKNPTWYSGEIEQIRDEGEDEDLSTTSKDGKAIDPLQAEEAALPGKRLLVVANTSQREPMYRWVCAQGEHICKMYTHLKEDRHQPKPRASYSSGGSSGYGYGGTYG-YDSGTRGRPPVAGAVGLRNLGNTCFMNSMLQCISHTPQLTSFFLGGEWRKDVNKDNPLGMNGKLATVYADFLKDVWGGNHTVVAPTGLKRTVGNFNPTFAGYAQQDSQEFMSFLLDGLHEDLNRNQTKPYTEQVESKGRPDAEVAAEQWRRHLLRNDSVVVDHCHGLLRSHLTCCKCSNDSITFDPFLSLSLPLPVHNTRAVSIFLLRVDLSLRPEKMTVDMESRACLGDVKKWISDQTG-----------------IDAERLVLTDVWQHKVTKTYRDKHPLSEVREDDDIWAHEL 779
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: W4GM05_9STRA (USP domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM05_9STRA) HSP 1 Score: 315 bits (807), Expect = 2.210e-85 Identity = 235/712 (33.01%), Postives = 340/712 (47.75%), Query Frame = 1 Query: 469 LRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSVRVQLYSRAKTMRQICADVKSSLNLT-PRVDTRLSLKKLEEAEQAGTAGGXXXXXTGSGAG-----STEGAEDDGWQAIHLEEVSQ-----------SLHEVMGDTQSVALLVE-----TKDTSDPAASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKK--WYEATVGEVKHEDGK-------------RLLY------IEVSENDVG---SQWMPEDSEEICKAHTHINKALPAR-----------------------THNRSXXXXXXXXXGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYF------RNQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDM 2379
LR+ L+EG D+ LL +E +A R V++ G + + VEL+P+ V+ +G V+++ + DV S NL R+ +R E A G G+ A + EDD WQ + ++ SL+ S LVE + D DP + + L WR L+ GD +DA+D+ NW+ES V +D P++VKVH+L W +KW+ L R S L++LH+ WR L + E S+ + W EATV +V+ +G R LY ++V G ++ + SE + + HI + A T NR+ S G++ T AK +G VGL NLGNTCF+NS+LQCL ++ L YF + + RE+N NPLGMGGK+A AYA L + WSGE VV P+ +K V+ +YAP FAGY QHD+ E++SF+LDGIHEDLNRV +KPY + ++ AGR D VA+E W YL+RNDSV+VD C LRSHVTCP C S+TFDPY SLSLP+P V++ + H + GSRP + + + K+ D+K A+ + + D L V++V +R+ + DS + D+
Sbjct: 34 LRQGLVEGRDFQLLERLEWEKWKADNDRAVEIPRQVIARGRGSHAEKVVELYPLLVEVHFWA-NGMTASAPVQMKKGVNLHILLSATLDVSSIKNLLWSRISSRYHELFPEYARSTDILG-YKAVNDGNWARHIRVCTKSRREDDSWQTLDESPMTPDDDVPRQRTVGSLNLTSDVDASCVFLVECPFINSTDARDPRNGEYYMSEVEDLGWRPMLQVGDYVDAKDTGNNWYESVV----IDVKPEKVKVHYLTWGDKWNVWLSRDSSKLERLHSRADEWRSTLGKGAPVEFSTAATTGIRGSWVEATVVDVQVVEGDDEGTDDVWPRPPPRSLYTGKTIRVKVQFTSGGLPHTKSLDASSELLSAPNVHIRRQTTAAVVATDIVKADCPQSNYSYSSGTYTTNRNTSWSTPS---SSGYHSTKYTAKAEFQGVVGLHNLGNTCFLNSVLQCLSNSKPLLDYFFQTDNDGGRVYMREINPRNPLGMGGKIAKAYAKLMEKMWSGESKVVTPSDLKYVIGEYAPAFAGYAQHDSQEVLSFILDGIHEDLNRVLEKPYTKPIEHAGRPDADVAKEEWANYLLRNDSVVVDHCMAQLRSHVTCPSCQNESITFDPYMSLSLPVPNQAWVLLTL--HGI--GSRPTQFGLHVPKEGVYADVKAALSAQSG-----------------VPIDRLLVVQVKHNRIVRSYADSMDIGDL 715
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: H3GNX8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNX8_PHYRM) HSP 1 Score: 311 bits (798), Expect = 3.580e-84 Identity = 198/489 (40.49%), Postives = 268/489 (54.81%), Query Frame = 1 Query: 1036 WRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSC--RNEVKKWYEATVGEVKHEDGKRLLYIEVSENDVGSQWMPEDSEEICKAHTHINKALPARTHNRSXXXXXXXXXGSYGFYRTNT-----KAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFR-------NQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTC--PECNLSSVTFDPYTSLSLPLPFDTAVMVKV-LFHPLPYGSRPMEVAVTLQKDN-TVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFA-VCQLEFPLPS-SYSS 2442
WR L LIDA+D+DK W+ES V ++ QVKVH+ GW+ KWDE L R+S + LHT WR D ++ + V R +W V + + + L IE+ E D QWM E +C TH KA+ T +S SY Y N + +P G VGL NLGNTCFMNSMLQC++ T L YF + + +E+N DNPLGM G+MA +A L WS E++VV P +K V+ +YAP FAGYQQ D+ ELM+FLLDG+HEDLNRV KPY + V+ GR+D VA+E W+++L RNDS++VD G LRSHVTC P+C S+TFDPY SLS+P+P + V +V LF G PM+ A+ L KDN T+RD K + + + + + +EVW+ R+ K DS P+ ++ D F +LE P+ S+SS
Sbjct: 284 WRYTLDVNQLIDAQDTDKKWYESRV----IESRGVQVKVHYRGWTAKWDEWLNRTSARIAPLHTKVRNWR-DFKIGDEILVGKDVERKSYPEWRIGRVTDTQKSEESDSLRIEL-EVDGSKQWMDAQDELLCPVGTH--KAVNVSTVVKSPVSSSSPGS-SYSRYGNNYASEPGRGRPTFEGVVGLRNLGNTCFMNSMLQCMINTAPLRDYFLMRDPDTGSPFFTKEINRDNPLGMKGRMAVDFATLLRKMWSNEFTVVTPTRLKSVIGEYAPQFAGYQQQDSQELMNFLLDGLHEDLNRVKTKPYTKPVERNGRSDPEVAQEEWQQFLRRNDSIIVDNFMGQLRSHVTCSNPDCGNESITFDPYMSLSVPIPNNETVTAQVQLFWA--NGDIPMKYAMRLPKDNSTLRDAKEELSKLSS-----------------IPVSRIFFVEVWNHRILKAYRDSLPIDQIR--DRFLHAYELELPVTGYSFSS 742
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: A0A5D6XVG0_9STRA (USP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVG0_9STRA) HSP 1 Score: 315 bits (807), Expect = 6.750e-84 Identity = 204/527 (38.71%), Postives = 278/527 (52.75%), Query Frame = 1 Query: 961 LLVETKDTS--DPA--ASTSFPRDHILLRWRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSC--RNEVKKWYEATVGEVKHEDGKRLLYIEVSENDVGSQWMPEDSEEICKAHTH--INKAL---------PARTHNRSXXXXXXXXXGSYGFYRTNT---KAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQH-------WKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTC--PECNLSSVTFDPYTSLSLPLPFDTAVMVKV-LFHPLPYGSRPMEVAVTLQKDNT-VRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLEFPLPSSYSSEK 2448
LLVET+ + DP + F D WR L G L+DA DS+K W+ES V E+++ +VKVH+ GW+ KWDE L RSS+ L LHT WR +V+ K ++ + +W + V E++ +G L I+V +D +W E +C TH +N AL PA T S SY Y + KP G VGL NLGNTCF+NSMLQCL+ T L YF + + ++N +NPLGM G +A +A L W GEY+VV P +K V+ +YAP FAGYQQ D+ E+M+FLLDG+HEDLNRV KPY V+ GR D VA E W RYL RNDSV+V+ G LRSH+TC P+C SVTFDP+ SLS+P+P D V V+V LF G P + A+ ++KD + +RD+K + + L+ L +EVW R+ K + D+ + D + + +LE P+ S K
Sbjct: 545 LLVETRFANPVDPTDWRNGKFLSDIQANEWRYQLVVGQLVDALDSEKKWYESRVIELEL----TRVKVHYRGWTAKWDEWLSRSSDRLAPLHTKVRNWRA-FRVHDKVQIGFPIPQKVFPEWKDGVVTELRRAEGTDALEIKVRYDDNKDEWRDAQDELLCAPGTHKPVNTALSAVTTYPRLPASTSTSSSSYGAGSYGSSYSRYGDRGEYGRGKPDFVGVVGLQNLGNTCFLNSMLQCLINTPPLKAYFLQVNNATQTGAFLNDINRENPLGMKGMIAIEFAELIQKMWGGEYTVVSPTRLKAVIGRYAPQFAGYQQQDSQEVMNFLLDGLHEDLNRVKVKPYTPAVEPNGRDDAEVAREEWERYLQRNDSVIVENFMGQLRSHLTCSNPDCGHESVTFDPFMSLSVPIPNDEVVSVQVQLFWA--DGRIPTKYAIRVRKDGSALRDVKRKLSE-----------------LSLVPTTRLFFVEVWKHRILKALNDAMLVEDFRE-ETLHAYELELPVTEYEFSSK 1046
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Match: W2Q8Z5_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2Q8Z5_PHYPN) HSP 1 Score: 308 bits (790), Expect = 4.280e-83 Identity = 200/484 (41.32%), Postives = 262/484 (54.13%), Query Frame = 1 Query: 1036 WRLNLKAGDLIDARDSDKNWFESTVTEVDVDGDPQQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRN--EVKKWYEATVGEVKHEDGKRLLYIEVSENDVGSQWMPEDSEEICKAHTHINKALPARTHNRSXXXXXXXXXG-SYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRNQH-------WKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTC--PECNLSSVTFDPYTSLSLPLPFDTAVMVKV-LFHPLPYGSRPMEVAVTLQKDN-TVRDLKTAICQRYNQERPQSKQXXXXXXXXLLTEDLLAVMEVWSSRVFKGMEDSCPLSDMKPTDDFAVCQLEFPLPS-SYSS 2442
WR L+ LIDA D+DK W+ES V VD QVKVH+ GW+ KWDE + R+S L LHT WR D Q+N + V N +W A V +++ + L IE+ E QWM E +C TH KA+ A T S YG + +P G VGLSNLGNTCFMNSMLQCL+ T L YF + + +E+N DNPLGM G MA +A L WS EY VV P +K V+ QYAP FAGYQQ D+ ELM+FLLDG+HEDLNRV KPY + V+ GR+D VA E W+++L RNDS++VD G LRSHVTC PEC S+TFDPY +LS+P+P + V V+V LF G PM+ A+ L KD +++D K + + + + +EVW+ R+ K D + ++ D +LE P+ S+SS
Sbjct: 299 WRFTLQKDQLIDALDTDKKWYESRV----VDLTEAQVKVHYRGWTAKWDEWINRTSSRLAPLHTKVRNWR-DFQLNDEILVGRVVNGKSYPEWRIARVTDLEKNEMDDSLRIEL-EMSGNKQWMDAQDEMLCPVGTH--KAVNASTVVTSPVSSYSPAHSYRYGRDFEAGRGRPEFEGVVGLSNLGNTCFMNSMLQCLINTAPLREYFLKKDPETGGLFFSKEINRDNPLGMKGIMAVEFASLLRKMWSNEYKVVTPTKLKSVIGQYAPQFAGYQQQDSQELMNFLLDGLHEDLNRVKSKPYTKPVERNGRSDPEVAREEWQQFLRRNDSIIVDNFMGQLRSHVTCSDPECGNESITFDPYMNLSVPIPNNETVSVQVQLFWA--NGDIPMKYALRLPKDACSLQDAKEKLSELSG-----------------IPTSRIFFVEVWNHRIIKAYSDRFSVERVRE-DVLHAYELELPVTEYSFSS 754 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.918.1 >prot_Ecto-sp6_S_contig103.918.1 ID=prot_Ecto-sp6_S_contig103.918.1|Name=mRNA_Ecto-sp6_S_contig103.918.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1058bp MTPSVSTTMSEEGVPAATPAPEVQREMIAEAMKLEMKQGQVWYVLGSKWWback to top mRNA from alignment at Ecto-sp6_S_contig103:424395..449138+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.918.1 ID=mRNA_Ecto-sp6_S_contig103.918.1|Name=mRNA_Ecto-sp6_S_contig103.918.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=24744bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:424395..449138+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:424395..449138+ >mRNA_Ecto-sp6_S_contig103.918.1 ID=mRNA_Ecto-sp6_S_contig103.918.1|Name=mRNA_Ecto-sp6_S_contig103.918.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3174bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:424395..449138+ (Ectocarpus species6 EcLAC_371)back to top |