mRNA_Ecto-sp6_S_contig103.902.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: D7FXU5_ECTSI (DnaJ_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU5_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 9.680e-181 Identity = 282/288 (97.92%), Postives = 284/288 (98.61%), Query Frame = 1 Query: 1 MLPQAYDTLRDPRSRGDYDDSLRNPAAXXXXXXXXXXXAYRPGAXXXXXXGPFEGVRVNLFDIFRFSPGNRENLGVPKARWRQIVVKVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISAMAFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTPEGVDVTFELVEKQSQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMVPPEGDD 864
MLPQAYDTLRDPRSRGDYDDSLRNPAAXXXXXXXXXX AYRPGAXXXXXXGPFEGVRVNLFDIFRFSPGNRENLGVPKARWRQIVVKVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISA+AFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTPEGVDVTFELVEKQSQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGT ISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMVPPEGD+
Sbjct: 1 MLPQAYDTLRDPRSRGDYDDSLRNPAAXXXXXXXXXX-AYRPGAXXXXXXGPFEGVRVNLFDIFRFSPGNRENLGVPKARWRQIVVKVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISAVAFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTPEGVDVTFELVEKQSQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGT---ISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMVPPEGDE 284
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A6H5L854_9PHAE (DnaJ_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L854_9PHAE) HSP 1 Score: 364 bits (934), Expect = 1.600e-124 Identity = 186/196 (94.90%), Postives = 190/196 (96.94%), Query Frame = 1 Query: 115 AYRPGAXXXXXXGPFEGVRVNLFDIFRFSPGNRENLGVPKARWRQIVVKVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISAMAFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTPEGVDVTFELVEKQSQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTA 702
AYRPGA GPFEGVRVNLFDIFRFSPGNRENLGVPKARWRQIVVKVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLP+SA+AFAAYVHLKLPRVPQGAF+VPILPGYRRGTKITFSTP+GVDVTFELVEKQSQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTA
Sbjct: 17 AYRPGAGAAAGGGPFEGVRVNLFDIFRFSPGNRENLGVPKARWRQIVVKVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPVSAVAFAAYVHLKLPRVPQGAFRVPILPGYRRGTKITFSTPDGVDVTFELVEKQSQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTA 212
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A836CM70_9STRA (DnaJ_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM70_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.260e-24 Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 262 VEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISAMAFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTPEGVDVTFELVEKQSQ-FRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
+E +LEEL +G V+E+ ERY QA +TGL +V + V L++ P+ +SA+ F H +P +P F+V I PG G +I + ++ E+VE + F R G+D+ + RL+ + + +G VPTL++GTA + L++ EARDGY + +PGLGMP R DGS RG L+V F+
Sbjct: 3 LECTLEELFAGAVREVQFKRGTWERYVQAGKTGLWMDVAAQALLVALPTLVRLPVALSAIFFGGVFHKMMPELPSEVFRVTIPPGCGDGAQIRLG--QDPEIFIEVVELPHKLFERRGNDVLIRRRLTARKMAQGGDFSVPTLERGTA---IVHLRKGEARDGYIKAVPGLGMPTR-----DGS--RGRLLVMFIT 186
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A484MIQ7_9ASTE (DnaJ_C domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MIQ7_9ASTE) HSP 1 Score: 69.3 bits (168), Expect = 4.580e-10 Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 499 VPILPGYRRGTKITFST---------PEGVDVTFELVEKQSQ-FRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
+ + PG+RRGTKITF PE D+ F + EK+ F+R GDDL + +++S GC ++VPTL G +++ + L G+E+ +PG GMP+ K+G RGDL + F++
Sbjct: 126 IKVKPGWRRGTKITFERKGDERMGTHPE--DIIFVIEEKKHPVFKREGDDLEIGVQISLAQALTGCTIEVPTL--GGEEKMVVNLDNEIIYPGFEKTIPGQGMPKYKEG--QAGRQRGDLRLKFLI 245
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A484MLH1_9ASTE (DnaJ_C domain-containing protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MLH1_9ASTE) HSP 1 Score: 69.3 bits (168), Expect = 8.820e-10 Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 499 VPILPGYRRGTKITFST---------PEGVDVTFELVEKQSQ-FRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
+ + PG+RRGTKITF PE D+ F + EK+ F+R GDDL + +++S GC ++VPTL G +++ + L G+E+ +PG GMP+ K+G RGDL + F++
Sbjct: 211 IKVKPGWRRGTKITFERKGDERMGTHPE--DIIFVIEEKKHPVFKREGDDLEIGVQISLAQALMGCTIEVPTL--GGEEKMVVNLDNEIIYPGFEKTIPGQGMPKYKEG--QAGRQRGDLRLKFLI 330
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A2G2VMZ6_CAPBA (J domain-containing protein n=5 Tax=Capsicum TaxID=4071 RepID=A0A2G2VMZ6_CAPBA) HSP 1 Score: 62.0 bits (149), Expect = 2.600e-7 Identity = 53/204 (25.98%), Postives = 91/204 (44.61%), Query Frame = 1 Query: 259 KVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISAMAFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTP-------EGVDVTFELVEKQ-SQFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
K+E +LEEL +G +K+++I I A TGL +++E + + + PG++RGTKI+F G D+ F + EK+ S F+R GDDL + + + GC + +P L ++++ + GYE+ +PG GMP+ K + RGDL++ F++
Sbjct: 177 KLECTLEELCNGCIKKVTITRDFI------ATTGL---IIKE---------------------------------EEVLTIKVKPGWKRGTKISFEGKGEERPGSHGSDIIFSIDEKKHSLFKREGDDLVLGVEVPLVQALTGCTITIPLLG---GDEMTVSFDDKIIYPGYEKIIPGQGMPKPKQ-----ENIRGDLVLQFLI 330
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A2G9HLL7_9LAMI (Molecular chaperone (DnaJ superfamily) n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HLL7_9LAMI) HSP 1 Score: 59.3 bits (142), Expect = 2.170e-6 Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 499 VPILPGYRRGTKITFSTPEG-------VDVTFELVEKQS-QFRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
+ + PG+++GTKITF D+ F + EK+ F+R GDDL + + + GC + VP L G QI++ + GYE+ +PG GMP KDG RGDL + F+V
Sbjct: 239 IKVKPGWKKGTKITFEGKGDERPGTLPADIIFSIDEKRHPMFKREGDDLALGVEVPLVQALTGCTIPVPLLGGG---QITLSIDD-IIYPGYEKIIPGQGMPTSKDG------KRGDLKLKFLV 352
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A484M0W3_9ASTE (DnaJ_C domain-containing protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484M0W3_9ASTE) HSP 1 Score: 57.4 bits (137), Expect = 6.150e-6 Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 505 ILPGYRRGTKITFSTPEG-------VDVTFELVEKQSQ-FRRSGDDLFVMLRLS-PKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSS-NRGDLIVHFMV 846
+ PG+++GTKITF D+TF + EK+ F+R GDDL + + + + + G + VP L + +++ L GYE+ +PG GMPR K G DG +RGDL + FMV
Sbjct: 130 VKPGWKKGTKITFEGKGDEKPGMLPADITFVIEEKRHPVFKREGDDLELGVEIPLVQALAGGSTITVPLLG---GESMTLDLDDDVIFPGYEKIIPGQGMPRPKKGIVDGGGGHRGDLRLRFMV 250
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A822Z8D4_NELNU (J domain-containing protein n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822Z8D4_NELNU) HSP 1 Score: 57.4 bits (137), Expect = 8.660e-6 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 496 KVPILPGYRRGTKITFSTPEGV----------DVTFELVEKQSQ-FRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREARDGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
K+ + PG++RGTK+TF EG+ D+ F + EK F+R DDL + + + GC + +P L G AK +S++LK GYE+ +PG GMP +D G RGDL V F +
Sbjct: 208 KIKVKPGWKRGTKVTF---EGMGDEKPGSLPADIVFLIAEKHHPLFKRVEDDLLLTIEIPLLSALTGCTLSIPLL--GGAK-MSLQLKD-IIYPGYEKIIPGQGMPDPRDQGR-----RGDLRVKFHI 323
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Match: A0A8B8R075_9MYRT (dnaJ homolog subfamily B member 1-like n=2 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8R075_9MYRT) HSP 1 Score: 57.4 bits (137), Expect = 9.640e-6 Identity = 56/205 (27.32%), Postives = 85/205 (41.46%), Query Frame = 1 Query: 259 KVEVSLEELLSGIVKEISIGDSIIERYKQAARTGLLSEVLQEGAAVFGALLIKCPLPISAMAFAAYVHLKLPRVPQGAFKVPILPGYRRGTKITFSTPEG-------VDVTFELVEKQSQ-FRRSGDDLFVMLRLSPKMVKRGCVVKVPTLDKGTAKQISMRLKRREAR-DGYERRLPGLGMPRRKDGGEDGSSNRGDLIVHFMV 846
K+E +LEEL G VK++ I +I + TG++ E + K+ + PG+++GTKI+F D+ F + EK+ F+R GDDL + + + GC + VP L MR+ E GYE+ +PG GMP K+ G+ RGDL + F V
Sbjct: 209 KLECTLEELFLGCVKKVKIKRDVI------SDTGIIQE-------------------------------------EETLKINVKPGWKKGTKISFEGKGDERPGYLPADIVFSIEEKRHPLFKRRGDDLEIAVEIPLVQALTGCTLSVPLLGGE-----DMRVPLDEIIFPGYEKAIPGQGMPNPKEKGK-----RGDLRLKFFV 360 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.902.1 >prot_Ecto-sp6_S_contig103.902.1 ID=prot_Ecto-sp6_S_contig103.902.1|Name=mRNA_Ecto-sp6_S_contig103.902.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=289bp MLPQAYDTLRDPRSRGDYDDSLRNPAAAAGGAAAAGGGAYRPGAGAAAGGback to top mRNA from alignment at Ecto-sp6_S_contig103:211586..216262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.902.1 ID=mRNA_Ecto-sp6_S_contig103.902.1|Name=mRNA_Ecto-sp6_S_contig103.902.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4677bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:211586..216262+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:211586..216262+ >mRNA_Ecto-sp6_S_contig103.902.1 ID=mRNA_Ecto-sp6_S_contig103.902.1|Name=mRNA_Ecto-sp6_S_contig103.902.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:211586..216262+ (Ectocarpus species6 EcLAC_371)back to top |