mRNA_Ecto-sp6_S_contig102.872.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: A0A6H5JE14_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE14_9PHAE) HSP 1 Score: 383 bits (983), Expect = 1.630e-126 Identity = 241/265 (90.94%), Postives = 247/265 (93.21%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEAIAHRREADASASAGSATSGAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTGAPGAAGGEFFCWVSVAVAMGVCGAAYVLATVE 922
MASDMAT+RLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNP+WSVSTILMGLYSFMLDNAATLGS+TSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEAIAHRRE D+S+SAGSAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEFFCW SVAVA+GVCGAAYVL TVE
Sbjct: 1 MASDMATKRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPVWSVSTILMGLYSFMLDNAATLGSITSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEAIAHRREVDSSSSAGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEFFCWASVAVAIGVCGAAYVLVTVE 263
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: W2KBB3_PHYPR (UBC core domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2KBB3_PHYPR) HSP 1 Score: 262 bits (670), Expect = 2.640e-80 Identity = 128/190 (67.37%), Postives = 156/190 (82.11%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEAIAHRR---EADASASAGSATSGA 688
MAS MAT+RLRKE +A++R P+D I A+P++ NILEWHYVITGTKG+PYEGG YHGKLKFPPEYPMKPPSVMM+TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+N ATLGS++++ AQK+++A SLE NC N FRKLFPDLV L E R+ + R+ + S S+GS+T GA
Sbjct: 1 MASVMATKRLRKEYLAMQRKPVDYIQAVPLETNILEWHYVITGTKGTPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAVASLETNCTNATFRKLFPDLVALQEEREKDQELLRQLTPDGATSTSSGSSTKGA 190
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: A0A3M6VRT7_9STRA (UBC core domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRT7_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.310e-79 Identity = 120/164 (73.17%), Postives = 143/164 (87.20%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRK 619
MAS MAT+RLRKE +A++R P+D I A+P++ NILEWHYVITGTK +PYE G+YHGKLKFPPEYPMKPPSV+MMTPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+N ATLGS++++ AQKK++A SLE NC N FRKLFPDLV LHE R+
Sbjct: 1 MASAMATKRLRKEYLAMQRKPVDYIQAVPLETNILEWHYVITGTKDTPYEDGYYHGKLKFPPEYPMKPPSVLMMTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKKKYAAASLETNCSNATFRKLFPDLVALHEERE 164
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: A0A8K1FJB7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJB7_PYTOL) HSP 1 Score: 258 bits (660), Expect = 6.330e-79 Identity = 120/171 (70.18%), Postives = 147/171 (85.96%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEAIAHR 640
MAS MAT+RLRKE +AI+R P++NI A+P+++NILEWHYVI GT G+PYEGG+YHG LKFPPEYPMKPPSVMMMTPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFM++N +T GS+ ++ AQK++ A ESLEVNC N FRKLFP+LVELH ++ +E A R
Sbjct: 1 MASAMATKRLRKEYLAIQRKPVENIQALPLESNILEWHYVIQGTSGTPYEGGYYHGCLKFPPEYPMKPPSVMMMTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMIENQSTYGSIKTTDAQKRKHAAESLEVNCNNALFRKLFPELVELHHKQVAEQEALR 171
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: A0A3F2RXI9_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXI9_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.200e-78 Identity = 120/166 (72.29%), Postives = 143/166 (86.14%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSE 625
MAS MAT+RLRKE +A++R P+D I A+P++ NILEWHYVITGTKG+PYEGG+YHGKLKFPPEYPMKPPSVMM TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+ ATLGS++++ AQK+++A SLE NC N FRKLFPDLV L E+R E
Sbjct: 1 MASVMATKRLRKEYLAMQRKPVDYIQAVPVETNILEWHYVITGTKGTPYEGGYYHGKLKFPPEYPMKPPSVMMTTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLETQATLGSISTTDAQKRKYAAASLEANCTNATFRKLFPDLVTLQEQRDKE 166
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: H3GEL4_PHYRM (UBC core domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GEL4_PHYRM) HSP 1 Score: 258 bits (659), Expect = 1.200e-78 Identity = 118/166 (71.08%), Postives = 145/166 (87.35%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSE 625
MAS MAT+RLRKE ++++R P+D I A+P++ NILEWHYVITGTKG+PYEGG+YHGKLKFPPEYPMKPP+VMM+TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML++ ATLGS+++S AQK+++A SLE NC N FRKLFPDLV L E R+ +
Sbjct: 1 MASAMATKRLRKEYLSMQRKPVDYIQAVPVETNILEWHYVITGTKGTPYEGGYYHGKLKFPPEYPMKPPAVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLESQATLGSISTSDAQKRKYAAASLETNCSNATFRKLFPDLVALQEEREKD 166
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: A0A0P1AWA5_PLAHL (Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA5_PLAHL) HSP 1 Score: 258 bits (658), Expect = 1.380e-78 Identity = 122/182 (67.03%), Postives = 152/182 (83.52%), Query Frame = 2 Query: 140 MATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELH-ERRKSEAIAHRREADASASAGSATS 682
MAT+RLRKE ++++R P+D I A+P++ NILEWHYVITGTKG+PYEGG YHG+LKFPPEYPMKPPSVMM+TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+N ATLGS++++ QK+++A SLE NC N FRKLFPDLV L ER K E ++ R E D+S + S+T+
Sbjct: 1 MATKRLRKEYLSMQRKPVDYIQAVPLETNILEWHYVITGTKGTPYEGGFYHGRLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSMSTTDGQKRKYAATSLETNCANATFRKLFPDLVALQAEREKDEELSRRLETDSSLATSSSTT 182
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: K3WBL5_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBL5_GLOUD) HSP 1 Score: 257 bits (657), Expect = 3.000e-78 Identity = 118/166 (71.08%), Postives = 143/166 (86.14%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSE 625
MAS MAT+RLRKE +A++R P++NI+A+P D+NILEWHYVITGT GSPYEGG+YHG LKFPPEYPMKPP+V M TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+N TLGS+T++ AQK++FA SLE NC N FR+LFP+LVEL + R +E
Sbjct: 1 MASAMATKRLRKEYLALQRKPVENIIAVPQDSNILEWHYVITGTSGSPYEGGYYHGCLKFPPEYPMKPPAVYMTTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQPTLGSITTTDAQKRKFAACSLETNCSNATFRRLFPELVELQQERDAE 166
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: M4BC77_HYAAE (UBC core domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC77_HYAAE) HSP 1 Score: 254 bits (649), Expect = 3.630e-77 Identity = 117/166 (70.48%), Postives = 143/166 (86.14%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSE 625
MAS MAT+RLRKE +A++R P+D I A+P++ NILEWHYVITGTKG+PYE G++HGKLKFPPEYPMKPPSV+M+TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+N ATLGS++++ AQK++FA SLE NC N FR LFPDLV L + R+ E
Sbjct: 1 MASAMATKRLRKEYLAMQRKPVDYIRAVPLETNILEWHYVITGTKGTPYEDGYFHGKLKFPPEYPMKPPSVLMLTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKFAAASLETNCSNAVFRNLFPDLVALQKARERE 166
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Match: A0A484E228_BRELC (UBC core domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E228_BRELC) HSP 1 Score: 253 bits (647), Expect = 6.940e-77 Identity = 117/164 (71.34%), Postives = 140/164 (85.37%), Query Frame = 2 Query: 128 MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRK 619
MAS MAT+RLRKE +A++R P++ I A+P++ NILEWHYVITGT GSPYEGG YHGKLKFPPEYPMKPPSVMM+TPNGRF ++RLCLSMSDFHPE+WNPMWSVS+IL GLYSFML+N TLGS++++ QK+++A SLE NC N FRKLFPDLV L E R+
Sbjct: 1 MASVMATKRLRKEYLAMQRKPVEYIQAVPLETNILEWHYVITGTTGSPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQTTLGSISTTDGQKRKYAMASLETNCSNATFRKLFPDLVALQEERE 164 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.872.1 >prot_Ecto-sp6_S_contig102.872.1 ID=prot_Ecto-sp6_S_contig102.872.1|Name=mRNA_Ecto-sp6_S_contig102.872.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=266bp MASDMATRRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEback to top mRNA from alignment at Ecto-sp6_S_contig102:518003..526671+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig102.872.1 ID=mRNA_Ecto-sp6_S_contig102.872.1|Name=mRNA_Ecto-sp6_S_contig102.872.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8669bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:518003..526671+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:518003..526671+ >mRNA_Ecto-sp6_S_contig102.872.1 ID=mRNA_Ecto-sp6_S_contig102.872.1|Name=mRNA_Ecto-sp6_S_contig102.872.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:518003..526671+ (Ectocarpus species6 EcLAC_371)back to top |