mRNA_Ecto-sp6_S_contig102.871.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 1.380e-137 Identity = 239/474 (50.42%), Postives = 307/474 (64.77%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKD-NWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQN 1418 N+DAR+V+ L++K AAK+NQS FK+ F+E +++ L + LK + W SLVRV+ERI RLWHVLRK L+SLLQPL+ ITRD + G VPMTAE HMAFA+LK E+LDPD PL+VFDIP P SPEAE+ E + + +LP MV LRPV KTR+ L+K LVE+L+ RVWD++SADPSPFR+++VLLTP + +L A LTAAD++HL LAPT D V KL+ CW DIK RA AAR+++ SA + GQP KRL + P RFA+ R G +D +SED+ L V+ E+ER+++L+MTA ELD REVL WW TG+ FPCLAPVAQQV G+Q A+QVE R+F N L NRSR+D YW EMVMFL N++ IPA + IP+IA K+IR+CLP RF G + DL AAEA D+++N Sbjct: 173 NKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVPKK---KKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKH--SARATAEGGQPPLKRLSTPATKARP----RFASLARNRVRGD--TEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVE-RDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIEN 612
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 2.640e-134 Identity = 214/318 (67.30%), Postives = 245/318 (77.04%), Query Frame = 3 Query: 507 MVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDG-QPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWAN--SEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFGL 1451 M+ + ELRPVTVKTRKELSKALVERLFGRVWD++SADPSPFRD+AVLLTPPFNTGKYL+ALRL+AADAE+L +GLAPT D+ VTAKLD CW DIK RAW AARER RRS +DDG QP KR R + ST S R SRF+ FGRG+A + D+ A+ SEDRKLG +VAGE+E YKSLF+ A ELDCREVL WW RTGKN FP LAPVAQQVFG+Q A SQVE VG+ L PNRSRMD YW E+VMFL ANF HIP +QIP++A KNIRSCLPARF+G + DL AAEA D+L N A P+ +D L Sbjct: 1 MILASELRPVTVKTRKELSKALVERLFGRVWDDDSADPSPFRDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSES--LDDGVQPLHKRFRGESSTSSATRKSRFSLFGRGDARS---STDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGI-LLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNTAPPSVNDIDL 312
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 384 bits (985), Expect = 1.180e-119 Identity = 218/484 (45.04%), Postives = 297/484 (61.36%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFGL 1451 N AR++++ VVK +N+S FK FE++++D L +I K W SL R +ER RLWHVLRK+Y+D+G F L+E + ++ +LQLYSLLQPLS+ITRD + GD PM A+ M F L +VLDP + L+VF +PP +DG G++ + LP MVP ++L KTR E+ +ALV R +GRVWDE + DP F +A LLTPPF+ G ++ A++L A D E+LP++ APT D VTAKLD W++IK RA A ++ ++ G R R P FAAFGR S GG + ++ +++ VA EI RYK +FMT+ +L EVLS+W TG+++FP L VAQQ FGSQ +A+ VE R+F FL+PNRSR++ YW EMVMFL ANF+ IP + IP I +K+IR CLPA+F G + DL +AE ALD L+N P DD GL Sbjct: 385 NPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPI------GEDGLPDRGQQ--KKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAGVFKRARTAGXXXRRRPVDGDEFAAFGR---SVGGVEESKQGDAVEQE----VANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVE-RDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRNNTPPGEDDTGL 852
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 341 bits (874), Expect = 4.450e-104 Identity = 212/476 (44.54%), Postives = 275/476 (57.77%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEA-EKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSP--ARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQN 1418 N+DAR V++LV+K AAK+NQS FK+ F+E ++ ++LK W SLVRVMERI RLWHVLRKVYA+DG EF LD+ +N++++LQLYSLL+PL+AITRD + G VPM+AE HMAFA+LK E LDP PL+VFDIPP P+SP A + D E + G+ LP V LRPV KTR+ L KALVE+L+ R+WDEESADPSPFR+++VLLTP + K+LD LTA DA+HL LAPT D V +KLDA W DI+ RA AAR+ + ++A DGQP KR CSP A RFA+ R A A + +SE L ++ EIERY SL++TA E+ +R+ W HIP + IP+IA ++I +CLP RF G + DL AAEAA D+++N Sbjct: 368 NKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHALTAGDAQHLGEGRAHLAPTLDDDVQSKLDASWADIRKRASDAARKEHSKAA--TGQDGQPPLKRF------CSPSGAPKPRFASLARHRARHES-ADGSDGDSEINVLMQQMSQEIERYHSLYITAEEV-----------------------------------------------------ARLSRTW------------HIPGFKDIPMIAARDIHTCLPPRFNGGDADLTAAEAAFDVIKN 769
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 329 bits (843), Expect = 1.540e-102 Identity = 202/487 (41.48%), Postives = 282/487 (57.91%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARM-GREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRR---SAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFG 1448 N AR+VI++V+K +N+S+ + FE++E + L ++LK W S+VR MERI RLWH LRK+Y+D+G+ F L+E +N+N VLQLYSLL+PL ITRD + G PM A+ +M LK +L+ ++ L+V++ P + GE + RE LP MV L P K R+EL +ALV RLFGR W DPS F DS+ LLTPP+++G ++ A++LT + ++LPT + L PT D V K W IK RA A +E + S D G R R +GS + A FA GA + + +D L VAGEI+R ++L M + +L R+VL++W ++G++AFP L VAQQ FGSQ A+Q+E R+F G NR+R+D YW EMV+FLKANF+ IP + IP + +K+IR CLPA+F G N L AE ALD L+N P G Sbjct: 40 NPGARDVIKVVIKVVENLNKSSNLRAKFEDLETELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKELKVYETP---------RVGENGLPDREEQNKPLPHKMVAHGNLHPAAKKAREELCRALVARLFGRYW-AGCVDPS-FVDSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTA------GAVEQSGSGDDGDLS--VAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIE-RDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDAEMALDPLENKTPPNTSAIG 506
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 316 bits (810), Expect = 1.950e-96 Identity = 188/461 (40.78%), Postives = 266/461 (57.70%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARM-GREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSR----FAAFGRGEA--SGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARF 1361 N +A +++ ++ +++S FE++++D L ++LK + W +LVR MER+ RLWHVLRK+Y+D G+ F+L+E +N++ + QLYSLLQ LS++TRD + G +PM A+ ++ F LK VL+ L+VFDIPP GE + R+ + L MV DEL PV K R +L +ALV R +G VWD+ DPS F D+A LLTPPF+ G YL A++LTA + ++L +APT D V KL+ W +IK RA A + R A G KR R G+ P+R F+ FG E S G ++ E V+GEI RYK +FM ++L +VL++W + GK FP L VAQQ FGSQ +A+Q+E R+F F NRSR + YW EMVM LK N+E IP + IP I +K+IR CLPA++ Sbjct: 141 NPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPL---------GEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAV--PSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEE-------VSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIE-RDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKY 582
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 292 bits (748), Expect = 1.810e-88 Identity = 196/485 (40.41%), Postives = 253/485 (52.16%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAAR-ERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYWAEMVMFLKANFEHIPATEQIPVIATKNIRSCLPARFYGLNPDLFAAEAALDILQNAAIPTADDFGL 1451 N AR++++ V+K +N+S+ FE++++D L ++ K W L R +ERI RLWH PLS+ITRD + G PMTAE M FA LK VLD PLRVFDIP +DG G + + LPS MV +D+L P T R+EL +AL+ RL+ RVW+E+S +PS F D+A LLTPPF+ G+++ A+RLTA DA +LP S +APT D VTAKLD W +I+ RA + + E+ R G P F R SGG A++ E G A E R MT+ EVLS+WGRTGK+AFP L VAQQ FG+Q +A+ VE R+F F++PNRSR+D YW EMVMFLKANF IP I K+IR CLPA+F G + D AE AL L N A P GL Sbjct: 95 NPAARDLLKTVIKVVETLNKSSNLGAKFEDLQVDLLGEVFKVVKHAPQRWLGLTRTLERIIRLWH--------------------------------PLSSITRDVQYGGAPMTAEIFMKFATLKTNVLDMSEPLRVFDIP------ALGEDGLPNRGEQ--KKALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNEQSPNPSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSDAGGGGGP----------------------FKRAHTSGGRSARNPTDPDEFTDSGRTAAVEEARR----MTSCSRS--EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVE-RDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSNDAPPAEAGLGL 509
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 261 bits (666), Expect = 6.410e-75 Identity = 164/423 (38.77%), Postives = 235/423 (55.56%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARM-GREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMSR----FAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVELDCREVLSWWGRTGKNAFPCLAPVAQQVFGSQVAASQVEDRNFDVGVNFLMPNRSRMDVYW 1253 N +AR +++ ++ +++S + FE++++D L ++L + W +LVR MER+ RLW V+RK+Y+D G+ F L+E +N++ + QLYSLLQPLS++TRD + G +PM A+ +M F LK VL+ L+VFDIPP GE + RE + LP MV DEL PV K R EL +ALV R +GRVWD+ DPS F D+A LLTPPF+ G Y A++LTA + E+L +APT D V KL+ W +IK RA A + R+A G KR R G+ +P+R F+ FGR E + + + E+ V+GEI R+VL++W + G+ P L VAQQ FGSQ +A+Q+E R+F F NRSR + YW Sbjct: 262 NPEARNMLKNLIGIIGTLHKSNLTAK-FEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPL---------GEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGA--APSRRKNYENDFSMFGRNEVAPSQSDEGDVDFVEEE-----VSGEI--------------MRDVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIE-RDFSHCGLFSTGNRSRAEEYW 652
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 248 bits (633), Expect = 7.150e-72 Identity = 147/360 (40.83%), Postives = 210/360 (58.33%), Query Frame = 3 Query: 3 NRDAREVIRLVVKTAAKMNQSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLRADGSTCSPARMS---RFAAFGRGEASGGGGAKDNWANSEDRKLGGIVAGEIERYKSLFMTAVE 1070 N +AR++++ V+ +N+S+ FK FE++++D L D+LK + W + VR +ER+ RLWHVLRK+Y+D G+ F L+E +N+N +LQL+SLLQ LS++TRD + G+ PM A+ M F +LK EVLDP +PL+VFDIPP +DG RE + LP MV D+L PV K R +L +ALV RL+GRVWD + DPS F D++ LLTPPF+ G +L A++LTA + +LP +APT V KLD W IK A A + + D KR R S S + +FA FGR E + +D+ S+ + V GEI RYK +F+ + + Sbjct: 101 NPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPL------GQDG--LPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVKTAQSEAEGSGGDGSGGLFKRARTRHSGSSRRKNPEEHQFACFGRTETT----QEDSQGESD--VVEDDVGGEIMRYKGVFIKSTQ 446
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.230e-69 Identity = 142/337 (42.14%), Postives = 192/337 (56.97%), Query Frame = 3 Query: 60 QSAAFKEMFEEIEIDALNDILKATGRGAG-WPSLVRVMERIFRLWHVLRKVYADDGEEFLLDEDNNRNDVLQLYSLLQPLSAITRDSRCGDVPMTAETHMAFAQLKAEVLDPDRPLRVFDIPPAPNSPEAEKDGEARMGREGGRPTLPSAMVPSDELRPVTVKTRKELSKALVERLFGRVWDEESADPSPFRDSAVLLTPPFNTGKYLDALRLTAADAEHLPTSMRGLAPTPDAGVTAKLDACWRDIKTRAWGAARERYRRSAPPVVDDGQPSRKRLR--ADGSTCSPARMSRFAAFGRGEASGGGGAKDNWANSEDRKL-GGIVAGEIERYKSLFM 1058 +S+ FK F+++++D L ++LK + W +LVR +ER+ RLW VLRK+Y+D G+ F L+E ++++ +LQLYSLLQP ++TRD + G PM A+ +M F LK VL P L+VFD+PP GE + E + LP MV D+L PV K R +L +ALV R +GRVWD + DPS D+A LLTPPF+ G YL A++LTA E+LPT APTPD V KLD W +IK RA A + R+A + KR R A GS+ R FA+FGR E D + D L V+ EI RYK +FM Sbjct: 67 KSSNFKAKFDDLQVDVLGEVLKIPDQAPQRWLTLVRTLERVVRLWRVLRKLYSDTGKTFPLEEGDDKDCILQLYSLLQPFPSVTRDGQYGGAPMLADIYMKFGMLKMRVLHPSEELKVFDVPPL---------GEDGLPEEQKK-ALPQKMVAHDDLHPVAQKARNKLCRALVTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEGCEYLPTGSCVTAPTPDEEVQKKLDGAWAEIKKRAVAAVKTAQSRAAGXXXXXXKRPLKRARTSAAGSSRRKNREDAFASFGRNEV-------DPQSREGDVDLVEKEVSSEIMRYKGVFM 386 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.871.1 >prot_Ecto-sp6_S_contig102.871.1 ID=prot_Ecto-sp6_S_contig102.871.1|Name=mRNA_Ecto-sp6_S_contig102.871.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=469bp MNQSAAFKEMFEEIEIDALNDILKATGRGAGWPSLVRVMERIFRLWHVLRback to top mRNA from alignment at Ecto-sp6_S_contig102:503134..505380+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig102.871.1 ID=mRNA_Ecto-sp6_S_contig102.871.1|Name=mRNA_Ecto-sp6_S_contig102.871.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2247bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:503134..505380+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:503134..505380+ >mRNA_Ecto-sp6_S_contig102.871.1 ID=mRNA_Ecto-sp6_S_contig102.871.1|Name=mRNA_Ecto-sp6_S_contig102.871.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:503134..505380+ (Ectocarpus species6 EcLAC_371)back to top |