mRNA_Ecto-sp6_S_contig101.825.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 285 bits (730), Expect = 2.300e-89 Identity = 384/420 (91.43%), Postives = 388/420 (92.38%), Query Frame = 1 Query: 1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMAVDNERVTTPSALMPAIAQADERDRPRLERDPRHGSRVHWATARAPEPTCQDGAGEGRGRVGWPTRPGGXXXXXCGEPRRARWR 1260 MPAPREDAEDR K LGDAA +IFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTA + AGAGED+EAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VDNE VTTPSAL+ DPRHGSRVH AT RAPEPTCQDGAGEGRGRVGWPTRPG XXXXX PRRAR R Sbjct: 1 MPAPREDAEDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDNEGVTTPSALIG---------------DPRHGSRVHGATDRAPEPTCQDGAGEGRGRVGWPTRPGXXXXXXXXXPRRARRR 405
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 239 bits (611), Expect = 5.730e-71 Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 1 MPAPR--EDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEE-VVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435 MP PR +DAEDR KILGDAADMIF+LMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGA+GSAG RGCDD TLLHAAAEGGNEE VVTA I AGA EDIEAKV+G+V GTPLHVAVATGK+AAAR +MLAGADVNAADRNGD Sbjct: 1 MPWPRREDDAEDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 227 bits (579), Expect = 6.900e-68 Identity = 120/145 (82.76%), Postives = 125/145 (86.21%), Query Frame = 1 Query: 1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQW EWLRAPLEHAAGTAN+DLVEKLLKAGADGSAGWRGCDD TLLHAA VVTA I AGAGED+EAK G GGTPLHVAV G++AAARVL+LAGADVNA D N D Sbjct: 1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPG-TGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTD 144
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 169 bits (428), Expect = 5.670e-44 Identity = 90/137 (65.69%), Postives = 104/137 (75.91%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435 E+R IL D D IFKL+CDRAT EQWAEWLRAPLEHAAGT N+DLV+KLL AGA+ AGWRGC KTLLHAAAEGGN V+T+ AGAG D++AK L G TPL +AV GK+AAA+ L++AGADVN D D Sbjct: 5 EERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLD-TGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATND 140
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 163 bits (412), Expect = 3.540e-43 Identity = 87/137 (63.50%), Postives = 103/137 (75.18%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435 E+R IL D D FKL+ DRAT +QWAEWLRAPLEHAA T N+DLV+KLL AGA+G AGWRGC KTLLHAAAEGGN +V+T AGAGED++AK L G TPL +AV GK+AAA+ L++AGA+VN D D Sbjct: 47 EERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALD-TGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATND 182
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 147 bits (372), Expect = 7.150e-37 Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDI--EAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAAD 423 +DR L DMI L+CD AT QW +WLR PLEHAAGT N LVEKLLK GA+ SAGWRGCD +TL+HA AEGG+E+V++ AGAG+ I +A + G+ TPLH+AV+ GK AA +VLMLAGADVN D Sbjct: 5 QDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGL---TPLHLAVSGGKLAATKVLMLAGADVNRLD 136
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI) HSP 1 Score: 132 bits (331), Expect = 2.930e-30 Identity = 77/136 (56.62%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNG 432 EDR + G M+FKL+ ++A S QW+EWLRAPLEHA + DL LLKAGADGSAGW GC D+TLL AAAEGGNEEVV + G E+++ V G T LH A+A G AARVLMLAGADV D G Sbjct: 5 EDRTALNG-LEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDV-VSGDNERTALHRALAGGHTEAARVLMLAGADVGLLDVKG 138
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI) HSP 1 Score: 130 bits (327), Expect = 3.970e-30 Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGED 303 EDR IL + D F+L+CDRAT EQWAEWLRAPLEHAA TA+ DLV+KLL AGA+GS GW GCD KTLLHAAAEGGN +V+ A + AGA D Sbjct: 8 EDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGD 100
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7G2A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A9_ECTSI) HSP 1 Score: 119 bits (297), Expect = 8.890e-29 Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 1 Query: 31 RVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGC-DDKTLLHAAAEGGNEEVV 270 R +I+ D D IFKL+CDR T+EQW+EWLRAPLEHAA TAN +LV KLL+AGA+G A WRGC DDKTLLHAAAEGG+ VV Sbjct: 2 RARIMQDLGDTIFKLVCDRVTAEQWSEWLRAPLEHAAATANYELVSKLLRAGANGGASWRGCHDDKTLLHAAAEGGDALVV 82
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.630e-28 Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAAD 423 ++R LG + +FKL+ AT QWAEWLRAPLEHA NQ L LL+AGADG AGW+GCD ++LL A +GGN + V+A + AG+ D+ A V G +PLH A+A G A ARVLMLAGA V+ D Sbjct: 5 DERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNA-VTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD 136 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.825.1 >prot_Ecto-sp6_S_contig101.825.1 ID=prot_Ecto-sp6_S_contig101.825.1|Name=mRNA_Ecto-sp6_S_contig101.825.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=421bp MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTAback to top mRNA from alignment at Ecto-sp6_S_contig101:627384..628750+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.825.1 ID=mRNA_Ecto-sp6_S_contig101.825.1|Name=mRNA_Ecto-sp6_S_contig101.825.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1367bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:627384..628750+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:627384..628750+ >mRNA_Ecto-sp6_S_contig101.825.1 ID=mRNA_Ecto-sp6_S_contig101.825.1|Name=mRNA_Ecto-sp6_S_contig101.825.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1263bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:627384..628750+ (Ectocarpus species6 EcLAC_371)back to top |