mRNA_Ecto-sp6_S_contig101.824.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 410 bits (1054), Expect = 3.070e-141 Identity = 209/224 (93.30%), Postives = 214/224 (95.54%), Query Frame = 1 Query: 1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVEGDHV 672 MPAPREDAEDRVKILGDAADMIFKLMCDRATS QW EWLRAPLEHAAGTAN+DLVEKLL+AGADGSAGWRGCDDNTLLHAA XXX VVTA IRAGAG+DMEAKTPGTGGTPLHVAV+RGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAA HGRHDVVHALAH ADLDAL+GKGMTPISLAVEGDHV Sbjct: 1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAASHGRHDVVHALAHTRADLDALDGKGMTPISLAVEGDHV 224
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 240 bits (612), Expect = 1.400e-72 Identity = 156/299 (52.17%), Postives = 176/299 (58.86%), Query Frame = 1 Query: 1 MPAPR--EDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEE-VVTAFIRAGAGDDMEAKTPG-TGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDT----------------PLHLAI-------------------------GVLGVDARIAQDLLLSGANPKA----------RGFAHDCPIHV---------------------------AARHGRHDVVHALAHKGADLDALNGKGMTPISL 651 MP PR +DAEDR KILGDAADMIF+LMCDRATS QWAEWLRAPLEHAAGTANQDLVEKLL+AGA+GSAG RGCDDNTLLHAAA NEE VVTA I+AGA +D+EAK G GTPLHVAV G+EAAAR ++LAGADVNA D N DT P+H A+ GV V A+ + L + A R A +H+ AAR GRHDVVHALA+KGADLDAL+ +GMTPISL Sbjct: 1 MPWPRREDDAEDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGDTTLLDLVIGCRGFARDCPIHAAVLVNSWLLGKICCIDETLDQENRSKGGVSWVGAQHPSSITLGHSPDHAYSPNTDRCMERANALSYVLHILGLIPDIQTILSDSLRFCRYTCLYLEHAARQGRHDVVHALAYKGADLDALDDEGMTPISL 299
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 234 bits (597), Expect = 6.060e-71 Identity = 120/145 (82.76%), Postives = 127/145 (87.59%), Query Frame = 1 Query: 1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPG-TGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTD 432 MPAPREDAEDR K LGDAA +IFKLMCDRATS QWAEWLRAPLEHAAGTANQDLVEKLL+AGADGSAGWRGCDD TLLHAAA NEEVVTA +RAGAG+DMEAK G GGTPLHVAV G++AAARVL+LAGADVNA D N D Sbjct: 1 MPAPREDAEDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 201 bits (511), Expect = 2.490e-57 Identity = 114/216 (52.78%), Postives = 132/216 (61.11%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVEGDHV 672 E+R IL D D IFKL+CDRAT QWAEWLRAPLEHAAGT N+DLV+KLL AGA+ AGWRGC TLLHAAA N V+T+ RAGAG DM+AK+ TG TPL +AVI G+EAAA+ L++AGADVN +D D LH A HG +VV AL KG DL+ LN KG TP+ LAV GDHV Sbjct: 5 EERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHV 218
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 177 bits (450), Expect = 5.400e-50 Identity = 102/216 (47.22%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVEGDHV 672 E+R IL D D FKL+ DRAT QWAEWLRAPLEHAA T N+DLV+KLL AGA+G AGWRGC TLLHAAA N +V+T AGAG+DM+AK TG TPL +AVI G+EAAA+ L++AGA+VN +D D A +G +VV AL KG DL+ +N +G P+ +A+ GDHV Sbjct: 47 EERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XACYGLDEVVLALVQKGVDLNCVNTRGEIPLCVALRGDHV 260
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.380e-41 Identity = 92/203 (45.32%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 64 IFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKG-ADLDALNGKGMTPISLAVEGDH 669 IFKL+ AT QWAEWLRAPLEHAA N LVE+LL AGA+G AGWRGC T+L AAA N +VV + +G D+ + + + LHVA + G EAAA+ L++AGADVN VD D + L + V G + LL+ GA P +R + P+H+AA G + VV L D+DAL+ +G++P+ +A EG H Sbjct: 17 IFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPG-DACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGH 218
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 145 bits (365), Expect = 6.050e-37 Identity = 74/132 (56.06%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 25 EDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVD 420 +DR L DMI L+CD AT QW +WLR PLEHAAGT N LVEKLL+ GA+ SAGWRGCD TL+HA A +E+V++ RAGAG + + P +G TPLH+AV G+ AA +VL+LAGADVN +D Sbjct: 5 QDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLD 136
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.300e-35 Identity = 82/172 (47.67%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 64 IFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDT-PLHLAIGVLGVDARIAQDLLLSGANPKA---RGFAHDCPIHVAARHG 567 IFK++ + AT QWA WLRAPLEHAA + N +LV++LL+AG DG AGWRGC +LL AAA N V++A ++AG G D+ TG + L+ +V+ EAAAR L+LAGADVN VD PL A+ G D + +LL++GANP F H P+H AA+ G Sbjct: 15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKA-GCDDLVG-NLLMAGANPNVIVRHSFGHGTPLHAAAKQG 184
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.510e-35 Identity = 91/212 (42.92%), Postives = 119/212 (56.13%), Query Frame = 1 Query: 40 ILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDH-NTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRH-DVVHALAHKGADLDALNGKGMTPISLAVEGDH 669 +L +A IFKL+ AT +WAEWLRAP EHAA N LVE+LLEAGADG AGWRGC T+L AAA N +VVT +R+ D+ + + + LH+AV EAAAR L++AGAD + VD N TP H+A G + + L GA P +R P+H+A G + DV L +DAL+ G +P+ LA H Sbjct: 9 LLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAE--GGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNGH 218
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 139 bits (349), Expect = 3.510e-35 Identity = 87/208 (41.83%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 64 IFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIH---------VAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVE 660 +FKL+ A+ QWAEWLR PLEHAA N +LVE+LL+AGAD AGWRGC TLL AAA N +V++A IR GAG D+ T + + LH A G EAAA+ LVL GADVN D + L+ + G ++ DL + GA P R DC + +A R G +V L GAD +P+ +A E Sbjct: 17 VFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSV-LSQAIQGSHTQLVNDLPIGGARPNIRD---DCGLGKTTYVTTFMLAVRRGHLAIVETLLEAGADCSLRQWADYSPLDVAAE 220 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.824.1 >prot_Ecto-sp6_S_contig101.824.1 ID=prot_Ecto-sp6_S_contig101.824.1|Name=mRNA_Ecto-sp6_S_contig101.824.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=315bp MPAPREDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTAback to top mRNA from alignment at Ecto-sp6_S_contig101:620742..621748+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.824.1 ID=mRNA_Ecto-sp6_S_contig101.824.1|Name=mRNA_Ecto-sp6_S_contig101.824.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1007bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:620742..621748+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:620742..621748+ >mRNA_Ecto-sp6_S_contig101.824.1 ID=mRNA_Ecto-sp6_S_contig101.824.1|Name=mRNA_Ecto-sp6_S_contig101.824.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=945bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:620742..621748+ (Ectocarpus species6 EcLAC_371)back to top |