mRNA_Ecto-sp6_S_contig101.804.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI) HSP 1 Score: 1774 bits (4596), Expect = 0.000e+0 Identity = 960/997 (96.29%), Postives = 968/997 (97.09%), Query Frame = 1 Query: 1 GERRWWKRDGGDYRLTSLRVKTKILKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAA-DAEDATASGSPRVGGTVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALLGGFASRTPPPGAADGDAAGVAAGGDADRAGAAAIEREAKEHAPQRATEFPPSFPAAAATPDDVESLNTSTPAADAPPAASSSAPDFAARAEA--TVAVGVSGSRTTAGPGSGSKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSSGEVAPTGPPVGGDGGASRGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRSEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNLAARTRKPPARRTKADGWRYYNNRRTGR 2982 G+R WWKRDGGDYRLTSLRVKTK+LKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGS+KGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGRED DDKSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPA PEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAA DAE+A ASG+PRVGGTVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALL GFASRTPPPG ADGDAAGVAAG EREAKEHAPQRATE P SFP AAATPDDVESLNTSTPAADAPPA+SSSAPDFAARAEA T AVGVSGSR TAGPGS KEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSSGEVAPTGPPVG DGGASRGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAE+VDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGR EGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATN+AARTRKPPARRTKADGWRYYNNRRTGR Sbjct: 6 GKRHWWKRDGGDYRLTSLRVKTKVLKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSIKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDTDDKSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPASPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAAADAEEAAASGAPRVGGTVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALLSGFASRTPPPGGADGDAAGVAAGXXXXXXXXXXREREAKEHAPQRATELPQSFPVAAATPDDVESLNTSTPAADAPPASSSSAPDFAARAEAEATAAVGVSGSRMTAGPGSSGKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSSGEVAPTGPPVGADGGASRGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNIAARTRKPPARRTKADGWRYYNNRRTGR 1002
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE) HSP 1 Score: 1652 bits (4279), Expect = 0.000e+0 Identity = 909/1002 (90.72%), Postives = 929/1002 (92.71%), Query Frame = 1 Query: 37 YRLTSLRVKT--KILKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDK--------------SESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAADAEDATASGSPRVGGTVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALLGGFASRTPPPGAADGDAAGVAAGGDADRAGAAAIEREAKEHAPQRATEFPPSFPAAAATPDDVESLNTSTPAADAPPAASSSAPDFAARAEATVAVG-VSGSRTTAGPGSGSKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXS---SGEVAPTGPPVGGDGGASRGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRSEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNLAARTRKPPARRTKADGWRYYNNRRTGR 2982 + LTS + K +ILKDM+GSGSC SLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLT QHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGK+RQQLLNDVK+GEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLAL+GDMEISQIREMPRG ANIETTL+PVAKAKEVMDRLKGRED DDK SESS RQHLASATERYDALVKELGEDRVTLLHGKMTSAEKN+RLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPA PEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAA D EDA ASG+PR GGTVALKEGG GAD DEE GRPESLGLLLVLCGLGADA+ALL GFASRTP PGAADGDAAGV AGG+ADR GA AIEREAKEHAP+RATEFP S P AAATPD VESL TSTPAAD P AASSS PDF RAEAT VG V SRTT GP S SKEPGPELAVPAAVYFDDEADFLEKSASEYAEMME QDEEDEYLSGFSFAP XXXXXXXXXXXXXXXXXX SG VAPTG PVGG GA GEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEY+DPG VGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGR EGGVVFVAHNAQFDHKFLKEE+SRCGFSRFMMGQDMGVVCIVDSLRCLKE+SLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMP+AHNAMGDVVGLERILSAPGINEGWRGVASSHP+CQIPVPRSLAELQAATN+AAR+RKPPARRTKADGWRYYNNRRTGR Sbjct: 402 FDLTSSQNKALDEILKDMDGSGSCRSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTGQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKSRQQLLNDVKAGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPRGAANIETTLVPVAKAKEVMDRLKGREDTDDKARCGVFWVLPQINKSESSARQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNRRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPATPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAA-DTEDAAASGAPRKGGTVALKEGGPGADCDEEGGRPESLGLLLVLCGLGADAEALLSGFASRTPLPGAADGDAAGVVAGGEADR-GAEAIEREAKEHAPERATEFPQSLPVAAATPDGVESLITSTPAADPPLAASSSTPDFVVRAEATAGVGGVLDSRTTTGPDSRSKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEDQDEEDEYLSGFSFAPPLQPXXXXXXXXXXXXXXXXXXXXXFSGGVAPTGTPVGGXXGAPSGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEELSRCGFSRFMMGQDMGVVCIVDSLRCLKENSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPNAHNAMGDVVGLERILSAPGINEGWRGVASSHPACQIPVPRSLAELQAATNIAARSRKPPARRTKADGWRYYNNRRTGR 1401
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A4D9CQG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQG2_9STRA) HSP 1 Score: 370 bits (949), Expect = 5.070e-105 Identity = 322/1028 (31.32%), Postives = 462/1028 (44.94%), Query Frame = 1 Query: 112 RMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIE---------------------------RP-----------DGKGN---LRVELLTGSVK-GKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKG--------------------REDADDKSESSTRQH---------LASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGND--ATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAA---AAADAEDATASGSPRVGGTVALKEGGAGADYDEERGRPESL---------------GLLLVLCGLGADAKALLGGFASRTPPPGAADGDAAGVAAGGDADRAGAAAIEREAKEHAPQRATEFPPSFPAAAATPDDVESLNTSTPAADAPPAASSSAPDFAARAEATVAVGVSGSRTTAGPGSGSKE-PGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSSGEVAPTGPPVGGDGGASRGEGVAIIRRA-DLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVL------GSENPRHS-------------------FAEYVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRSEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSH 2841 RM RLLQGDVG+GKT A L MLRA G Q+ MLAPTE+L QH TL+ ++ G++ RP +G+G LR+E+LT + K GKAR+ LL +++ GE+DIL+ TH++L S FRDLGL V+DEE RFGV QR+KL+ +VLY+SATPIPR+L L +GDME+S++ E P + T++ P+ ++ +RL+ R D++E + + S T+R+ A+V+ LGE+ V ++HG+M S K + L +FS G RVLVSTS++EVGVDVP A VC+VE+AE FGLSQLHQLRGR+GR A + + A+ D+ HC+L Y N A +RL ++KT DGF +AE+DL LRGPGEVLG RQ G+ F++ DLA+ L + A++ AR +S R A A G + K +G + +E RP S LL K +GG + + PP ++ +A I AP ++ PP + TV G +T P SG +E G EL + M G E + FS + + I R + DL T ++ D ETTGLRA+ +R+IQLAAKVL G E+ + F YVDPG +P ++ EITGI+ E L AR F +VWP+F W++ V R VV VAHNA FDHK L ++ R + ++ +V ++D+L + +W +++ D +P +P F+ G ++ +L ++ +AH+A GDV+GLE +L P +N+ WR S+H Sbjct: 395 RMVRLLQGDVGTGKTLCALLGMLRAIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQVREMEAVEETRGISAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKALLEELRRGEIDILIGTHSLL-SDEVVFRDLGLTVIDEEHRFGVRQREKLSNDT-NVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT----RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRG---------YAVSAKADRKAM-------DQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKG--FRLVDLAKHEGLLDEANQVARAHADSVVRREEGCTVEAVAHGNILEYEGVETLLRIFEAKPSSSGENIQKES-RPSSXXXXXXXKVSTQSKNNSLLESTASXXXXXKLSMGGVSKKKPPT--------------SLQKSKSAPIANACTAPAPSSISDLPPGW--------------------------------------TTVTYGDRFEISTPPPSSGDEEIEGGELTL-----------------------MPGT--EPVLSTRFSI---------------------------------------------DDLPIPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSDWGGGEDDEQANQLAAAGLASGGEPEDGLLFNGYVDPG-FWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAV--------RGGKPVVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGD-GLPIKPNTFRQGALYRYLLRDDLQNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAH 1265
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: R6J7Z3_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Azospirillum sp. CAG:239 TaxID=1262705 RepID=R6J7Z3_9PROT) HSP 1 Score: 303 bits (776), Expect = 7.880e-86 Identity = 192/448 (42.86%), Postives = 271/448 (60.49%), Query Frame = 1 Query: 67 KILKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKS-------ESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVES----WTPRGAA 1371 K+LK++ + S RM RLLQGDVGSGKT VA ++ML A G+Q+ ++APTE+L QHL+T++ + E I +R ELLTG +KGKAR ++L D+++G++DIL+ THA+ A T F+DL VVDE+ RFGV QR L+ G +L ++ATPIPR+L L +GDME S+I + P+G ++T ++P++K ++V LK + + ++ E S + LA+A ER+D L K G + V L+HGKM EK+ + F GE L+VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+ R Q S CILLY + + ERL +R+T DGFL+AE+DL LRG GE+LG RQ G+ E F++AD+ L A+K A+ +V TPRG A Sbjct: 272 KVLKEIF-ADQASPYRMLRLLQGDVGSGKTIVALMSMLNAVECGTQAAIMAPTEILAKQHLETMQPLCEEI-------GIRAELLTGRIKGKARARILEDLEAGKIDILIGTHALFVEAVT-FKDLACVVVDEQHRFGVHQRLALSDKGNKPDILVMTATPIPRTLVLTAYGDMEYSKIDQPPKGRKPVDTRVLPISKLQDVAAALKRKIEQGCRAYWVCPLVEESEKVDLAAAVERFDTLRKIFGGE-VGLVHGKMKEKEKDAVMERFKAGE----LKVLVATTVIEVGVNVPEATVMVIEHAERFGLAQLHQLRGRIKRGF------------------------------QASTCILLYAYPLSETSRERLNIMRETEDGFLIAEKDLELRGGGEILGTRQSGFCE--FRIADMNEHKHLLYTANKDAQMIVAQDEKLSTPRGEA 673
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A6M8VV20_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VV20_9PROT) HSP 1 Score: 302 bits (774), Expect = 1.570e-85 Identity = 198/460 (43.04%), Postives = 265/460 (57.61%), Query Frame = 1 Query: 37 YRLTSLRVKT--KILKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQH--VLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKS-------ESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLV----ESWTPRGAA 1371 ++LTS + + +I DM +RM RLLQGDVGSGKT VAF AML A G+Q+ ++APTE+L QH +T+ A + L +LTG KGKARQ++L + G I++ THA+ F DLGLAVVDE+ RFGV QR KL G + +L ++ATPIPR+LTL +GDM+ S++ E P G I+T L+ A+ +EV+ LK + + D ++ E S LA+A ER+ L + G DR LLHG+M +AEK+ + F GE + VLVST++IEVGVDVP A V V+E+AE FGLSQLHQLRGR+GR+D + S CIL+Y P +G +RL +R T DGFL+AE DL LRG GE+LG RQ G E FK+A+L L + A AR ++ + TPRG A Sbjct: 265 FQLTSAQERAIKEINADMH-----EPMRMLRLLQGDVGSGKTVVAFFAMLNAVASGAQAALMAPTEILAQQHSKTISDYAATL-------GLETVILTGRHKGKARQEILEKIADGSAKIIIGTHALFQD-DVIFHDLGLAVVDEQHRFGVHQRLKLAGKGKDCDILVMTATPIPRTLTLTAYGDMDFSRLDEKPAGRKPIDTRLVSTARLEEVVAGLKRKIETDARAYWICPLVEESEVMDLAAAEERWLTLQQVFG-DRTGLLHGRMNAAEKDAVMQRFVAGE----IDVLVSTTVIEVGVDVPEATVMVIEHAERFGLSQLHQLRGRVGRSD------------------------------EESACILVYDPKIGETGKKRLTTIRNTEDGFLIAEEDLKLRGAGELLGTRQSGMPE--FKLANLHDHARLVKIARDDARLIIAQDPDLQTPRGQA 674
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A7W9ZG52_NOVIT (ATP-dependent DNA helicase RecG n=2 Tax=Novispirillum itersonii TaxID=189 RepID=A0A7W9ZG52_NOVIT) HSP 1 Score: 301 bits (771), Expect = 4.180e-85 Identity = 193/417 (46.28%), Postives = 257/417 (61.63%), Query Frame = 1 Query: 112 RMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKS-------ESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRAR 1335 RM RL+QGDVGSGKT VA +AML A GSQ+ ++APTE+L QH +TL +AE I +R+ +LTG KGK R LL + +GE+DILV THA+ S FRDLGLAV+DE+ RFGV+QR +LT G VL ++ATPIPR+LTL L+GDM++S++ E P G ++T L+ +++ +EVM + A K E S LA+A ER+ A++++L R+ L+HGKM +AEK+ ++ FSG GL VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+GR D+ S C+LLYG + RL+ +R++ DGFL+AE DL LRG GEVLG RQ G E F+VADLA G L A AR Sbjct: 288 RMLRLVQGDVGSGKTVVALMAMLNAVECGSQAALMAPTEILARQHAETLHPLAEAI-------GIRLAVLTGRDKGKPRAALLEALAAGEIDILVGTHALFQS-DVQFRDLGLAVIDEQHRFGVQQRLELTAKGRMTDVLVMTATPIPRTLTLTLYGDMDVSKLDEKPPGRKPVDTRLVSLSRLEEVMAGVGRAVAAGAKVYWVCPLVEESETSDLAAAEERH-AVLQDLYGSRIGLVHGKMKAAEKDAVMAAFSGD----GLDVLVATTVIEVGVNVPAATVMVIEHAERFGLAQLHQLRGRIGRGDKA------------------------------STCLLLYGGPLSETGKARLEIMRQSEDGFLIAEEDLRLRGGGEVLGTRQSGLPE--FRVADLAVHGELLATARDDAR 659
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: R5Q3I9_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Acetobacter sp. CAG:977 TaxID=1262685 RepID=R5Q3I9_9PROT) HSP 1 Score: 299 bits (765), Expect = 1.110e-84 Identity = 199/453 (43.93%), Postives = 267/453 (58.94%), Query Frame = 1 Query: 55 RVKTKILKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKS--------ESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLV----ESWTPRGAA 1371 RV ++I +DM S RM RL+QGDVGSGKTAVA LAML AA G+Q+ ++APT++L QH + +R++AE I +R LLTG KGK R ++L ++SG I++ THA+ F+DL L VVDE+ +FGV+QR L+ G +L ++ATPIPR+L L +GDME+S+I E+P G I T ++P ++ EV R R AD E S + LA+A +RY+ L G DRV L+HGKM SAEK++ + F+ +LV+T++IEVGVDVP A V V+E+AE FGL+QLHQLRGR+GR G +E S C+LLYG + A RLK +R+T+DGFL+AE DL LRG GEVLG RQ G E FK+ADL+ G L + A A+ +V E T RG A Sbjct: 234 RVLSEIDQDM-----ASPSRMLRLVQGDVGSGKTAVALLAMLNAAETGAQAALMAPTDILANQHFEKIRNIAEPI-------GVRCVLLTGRNKGKKRAEILESIRSGNAGIIIGTHALFQD-DVIFKDLALTVVDEQHKFGVQQRLALSSKGGGADMLVMTATPIPRTLALTYYGDMEVSRIDELPPGRKPITTRVLPSSRLDEVA-RALSRTVADGNKAYWVCPLVEESEKIDLAAAQKRYEYLKARFG-DRVVLVHGKMKSAEKDEAMQRFASNSAD----ILVATTVIEVGVDVPAATVMVIEHAERFGLAQLHQLRGRIGR---GTKE---------------------------SSCLLLYGEPLSETAKARLKVMRETQDGFLIAEEDLTLRGAGEVLGTRQSGLEE--FKIADLSVHGDLLKTARNDAKYIVNIDPELQTQRGCA 635
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A109K2R4_9BRAD (ATP-dependent DNA helicase RecG (Fragment) n=1 Tax=Bradyrhizobium macuxiense TaxID=1755647 RepID=A0A109K2R4_9BRAD) HSP 1 Score: 293 bits (751), Expect = 1.950e-84 Identity = 176/395 (44.56%), Postives = 248/395 (62.78%), Query Frame = 1 Query: 109 LRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDAD----------DKSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKG 1257 +RM RL+QGDVGSGKT VA LA A G Q+ ++APTE+L QH++T+ +AE + +RV +LTG KGK R++LL +++GE+D+LV THA++ ++ L LAVVDE+ RFGV +R LT G A VL LSATPIPR+L L FGDM++S++RE P G I+T +P+++ ++VMD + DA D+SE+ +HL +ATER+++L K GE RV L+HG+M EK++ +++F E + +LV+T+++EVGVDVP A + V+ENAE FGL+QLHQLRGR+GR GS + S C+LLY +G + RLK +R+T DGF +AE DL LRG G+VLG+RQ G Sbjct: 93 VRMLRLVQGDVGSGKTVVALLAAAAVAEAGKQAALMAPTEILARQHIKTIAPLAE-------RAGMRVAILTGREKGKERRELLARLEAGEIDLLVGTHALIQD-DVIYKALALAVVDEQHRFGVRERLALTSKGEAVDVLVLSATPIPRTLVLTYFGDMDVSELREKPAGRQPIDTRAVPMSRIEDVMDGVGRALDAGKLIYWICPLVDESEAEGTEHLTNATERFESLQKRFGE-RVGLVHGQMKGTEKDRVMAQFVAHE----ISLLVATTVVEVGVDVPAATIMVIENAERFGLAQLHQLRGRIGR--------------GS----------------EASTCLLLYKEPLGEMSKARLKVIRETTDGFRIAEEDLKLRGEGDVLGIRQSG 444
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A520NQ67_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NQ67_9PROT) HSP 1 Score: 298 bits (764), Expect = 3.730e-84 Identity = 194/437 (44.39%), Postives = 264/437 (60.41%), Query Frame = 1 Query: 64 TKILKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKS-------ESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVE 1347 ++I DM+ SGS RM RLLQGDVGSGKT VA +AML AA QG+QS ++APTE+L QH T+ +AE I + V L+TG KGK R++L++ + SG+ I++ THA+L F DL L VVDE+ RFGV QR L G A VL ++ATPIPR+L + +GD+E S++ E P G IET +P+++ ++V+DRL+ + + E S +A+ATER AL + G DRV L+HG++ +AEK+ ++ F+GGE L +LV+T++IEVGVDVP A + V+E AE FGL+QLHQLRGR+GR DR S CILLYG +G A RLK +R T DGF++AE DL LRG GEVLG +Q G + F++ADLA L + A A ++E Sbjct: 275 SEIAGDMK-SGS----RMLRLLQGDVGSGKTVVALMAMLTAAEQGAQSALMAPTEILARQHFATIEPLAEAI-------GVSVILITGRDKGKKREKLVSRLNSGDTPIVIGTHALLQD-DIGFDDLALVVVDEQHRFGVHQRLALAEKGAAADVLVMTATPIPRTLMMTAYGDLETSRLTEKPAGRKPIETRAMPLSRLEDVVDRLRPAIASGARIYWVCPLVEDSDVLDVAAATERQAALAQRFG-DRVGLVHGRLKAAEKDAVMARFAGGE----LDILVATTVIEVGVDVPEATIIVIEQAERFGLAQLHQLRGRVGRGDR------------------------------PSSCILLYGEPLGETAKARLKVMRDTDDGFVIAEEDLRLRGAGEVLGTKQSGLPQ--FRMADLAVHADLIDTARDDALLILE 661
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Match: A0A2D8PQZ0_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQZ0_9PROT) HSP 1 Score: 298 bits (763), Expect = 5.130e-84 Identity = 185/409 (45.23%), Postives = 249/409 (60.88%), Query Frame = 1 Query: 112 RMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTG--FAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDADDKS--------ESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPALPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSL 1308 RM RLLQGDVGSGKT VA ++ML A QGSQS ++APTE+L QH T+ +A+ I + V L+TG KGK R+ L++ +KSGE I++ THA+ AF+DL L VVDE+ RFGV QR L G A +L ++ATPIPR+L + +GD+E S++ E P G IET +P+A+ +V+DRL AD E S +A+ATER+ AL + G DRV L+HG++ +AEK+ + F+ G+ L +LV+T++IEVGVDVP A + V+E AE FGL+QLHQLRGR+GR+D+ S CILLYG + + AT RLK +R+T DGF++AE DL LRG GEVLG RQ G + F++ADLA L Sbjct: 286 RMLRLLQGDVGSGKTLVALMSMLVAVEQGSQSALMAPTEILARQHFATIEPLAQEI-------GVEVTLITGRDKGKRRKALVDGLKSGETKIVIGTHAIFQD-DVAFKDLALVVVDEQHRFGVHQRLALAGKGAAADILVMTATPIPRTLMMTAYGDLETSRLTEKPAGRKPIETRALPIARIGQVVDRL-NHATADRARVYWVCPLVEDSDVIDIAAATERHAALSQRFG-DRVGLVHGRLKAAEKDAVMERFAAGD----LDILVATTVIEVGVDVPEATIMVIEQAERFGLAQLHQLRGRVGRSDKA------------------------------SSCILLYGEPLTDTATARLKVMRETNDGFVIAEEDLRLRGAGEVLGTRQSGLPQ--FRIADLAVHADL 648 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.804.1 >prot_Ecto-sp6_S_contig101.804.1 ID=prot_Ecto-sp6_S_contig101.804.1|Name=mRNA_Ecto-sp6_S_contig101.804.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=968bp MEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVback to top mRNA from alignment at Ecto-sp6_S_contig101:350869..363458- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.804.1 ID=mRNA_Ecto-sp6_S_contig101.804.1|Name=mRNA_Ecto-sp6_S_contig101.804.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=12590bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:350869..363458- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:350869..363458- >mRNA_Ecto-sp6_S_contig101.804.1 ID=mRNA_Ecto-sp6_S_contig101.804.1|Name=mRNA_Ecto-sp6_S_contig101.804.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2904bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:350869..363458- (Ectocarpus species6 EcLAC_371)back to top |