mRNA_Ecto-sp6_S_contig101.802.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: D7FPN5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN5_ECTSI) HSP 1 Score: 153 bits (387), Expect = 3.400e-47 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 Query: 1 MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAMLP 240 MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAMLP Sbjct: 1 MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAMLP 80
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: A0A835YX81_9STRA (Yos1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX81_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 6.350e-20 Identity = 45/72 (62.50%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 22 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237 LW LFK GLL TNAV ILHK+RFLR E D + +S +KNQ +GLI AVAYLRGPLI +N LTC ML Sbjct: 4 LWSLFKTGLLVTNAVAILHKERFLRPLGWAEPDPALGSSNLKNQAIGLINAVAYLRGPLIAINLLTCTFEML 75
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: K8ZAA6_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAA6_NANGC) HSP 1 Score: 73.6 bits (179), Expect = 1.640e-15 Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 1 Query: 22 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237 +W L+K+GLL TN V +LH++RFLRKY LD + + + S ++NQVVGL+ AV YL+ PLI LN +T VI +L Sbjct: 5 IWSLYKSGLLFTNGVAVLHRKRFLRKYGLDVAEVADTTS-IRNQVVGLLNAVQYLKVPLIALNIVTVVIELL 75
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: A0A2D4BY06_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY06_PYTIN) HSP 1 Score: 68.9 bits (167), Expect = 1.040e-13 Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSL 216 +LW F + LL TNAV ILH++RFLRKY D+VD S + ++NQ+VG + AV YLR PLIV+N+L Sbjct: 2 GVLWGFFLSSLLLTNAVCILHEKRFLRKYGWDKVDPSQGMT-IRNQIVGFLVAVQYLRVPLIVVNAL 67
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: A0A067C849_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C849_SAPPC) HSP 1 Score: 68.6 bits (166), Expect = 1.560e-13 Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 22 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSAS-AMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237 +WKL + LL+ NA+ ILH++RFLR+Y D+++ S S +MKNQVVG + AV YLR PL+V+N + + +L Sbjct: 4 IWKLIMSSLLSVNALAILHEKRFLRRYGYDQLEASSGGSPSMKNQVVGFLVAVQYLRMPLVVINIVAIFLELL 76
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: A0A8K1FQA8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQA8_PYTOL) HSP 1 Score: 67.0 bits (162), Expect = 6.000e-13 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNS 213 +LW F + LL TNAV ILH++RFLR Y D++D S + +KNQVVG + AV YLR PLI++N+ Sbjct: 2 GVLWDFFLSSLLLTNAVCILHEKRFLRPYGWDKIDSSQGMT-IKNQVVGFLVAVQYLRVPLIIVNA 66
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: A0A3F2RI45_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI45_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.710e-12 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSL 216 +LW F LL TNAV ILH++RFLR + D+VD S + +KNQ+VG + AV YLR PL+V+N+L Sbjct: 2 GVLWNFFLTSLLLTNAVCILHEKRFLRSHGWDKVDSSQGMT-IKNQIVGFLIAVQYLRFPLMVINTL 67
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: K3WSH3_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSH3_GLOUD) HSP 1 Score: 60.5 bits (145), Expect = 2.290e-10 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAM 234 +LW LL TNAV ILH++RFL+ Y +V+ S + +KNQVVG + AV YLR PLIV+N+ V+ + Sbjct: 2 GVLWNFVLTSLLLTNAVCILHEKRFLKPYGWHKVEASEGMT-IKNQVVGFLVAVQYLRVPLIVINAFMIVLEL 73
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: A0A0P1A8P8_PLAHL (Immediate early response 3-interacting protein 1-like n=12 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1A8P8_PLAHL) HSP 1 Score: 60.1 bits (144), Expect = 3.250e-10 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSL 216 +LW LL TNAV ILH++RFLR + +VD S + +KNQ+VG + AV YLR PL+++N+L Sbjct: 2 GVLWNFVLTSLLLTNAVCILHEKRFLRSHGWHKVDSSQGMT-IKNQIVGFLIAVQYLRFPLMIINTL 67
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match: G4ZTT8_PHYSP (AP-3 complex subunit delta n=21 Tax=Phytophthora TaxID=4783 RepID=G4ZTT8_PHYSP) HSP 1 Score: 60.8 bits (146), Expect = 5.900e-9 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237 +LW LL TNAV ILH++RFLR + +VD S + +KNQ+VG + AV YLR PL+++N+L ++ +L Sbjct: 2 GVLWNFVLTSLLLTNAVCILHEKRFLRPHGWHKVDSSQGMT-IKNQIVGFLIAVQYLRFPLMIINTLMILLELL 74 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.802.1 >prot_Ecto-sp6_S_contig101.802.1 ID=prot_Ecto-sp6_S_contig101.802.1|Name=mRNA_Ecto-sp6_S_contig101.802.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=81bp MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNback to top mRNA from alignment at Ecto-sp6_S_contig101:339601..340862+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.802.1 ID=mRNA_Ecto-sp6_S_contig101.802.1|Name=mRNA_Ecto-sp6_S_contig101.802.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1262bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:339601..340862+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:339601..340862+ >mRNA_Ecto-sp6_S_contig101.802.1 ID=mRNA_Ecto-sp6_S_contig101.802.1|Name=mRNA_Ecto-sp6_S_contig101.802.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=243bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:339601..340862+ (Ectocarpus species6 EcLAC_371)back to top |