mRNA_Ecto-sp6_S_contig101.792.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI) HSP 1 Score: 741 bits (1912), Expect = 3.530e-270 Identity = 357/367 (97.28%), Postives = 363/367 (98.91%), Query Frame = 1 Query: 1 MPRCRHSLAAGLSALCLGRQAAVARASSCAYRFASFPNVSDLPVWNLPASLPWGPEASTFGGANPIVYLSDDGTEEAVDCTGDSWRYQAANGEWKTELSFPVTWESSDAAPTVSFEGFFNATGDGEVTVSGIPTSIAPAVSDSLYGRNIELALTCNQEDHIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSSGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKVGGQDFDESCDDHSGLCVHDGPDDDTDSGIRCETGIGLAYVLTFVVLSLLLAF 1101 MPRCRHSLAAGL+ALCLGRQAAVARASSCAYRFASFPNVSDLPVWNLPASLPWGPEASTFGGANPIVYL+DDGTEEAVDCTGDSWRYQAANGEWKTELSFP TWESSDAAP VSFEGFFNATGDGE+TVSGIPTSIAPAVSDSLYGRNIELALTCNQED IVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVS GCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFK+GGQ+FDESCDDHSGLCVHDGPDDDTDSG+RCETGIGLAYVLTFVVLSLLLAF Sbjct: 4 MPRCRHSLAAGLTALCLGRQAAVARASSCAYRFASFPNVSDLPVWNLPASLPWGPEASTFGGANPIVYLADDGTEEAVDCTGDSWRYQAANGEWKTELSFPATWESSDAAPMVSFEGFFNATGDGEITVSGIPTSIAPAVSDSLYGRNIELALTCNQEDQIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKIGGQEFDESCDDHSGLCVHDGPDDDTDSGVRCETGIGLAYVLTFVVLSLLLAF 370
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Match: A0A6H5L4X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X3_9PHAE) HSP 1 Score: 336 bits (862), Expect = 4.920e-112 Identity = 184/293 (62.80%), Postives = 199/293 (67.92%), Query Frame = 1 Query: 223 EEAVDCTGDSWRYQAANGEWKTELSFPVTWESSDAAPTVSFEGFFNATGDGEVTVSGIPTSIAPAVSDSLYGRNIELALTCNQEDHIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSSGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKVGGQDFDESCDDHSGLCVHDGPDDDTDSGIRCETGIGLAYVLTFVV--LSLLL 1095 EEA+DCTGDSWR+QAA+GEWKTELSFP TWESSDAAP VSFEGFF A GD EV +SGIPTSIAPAV+DSLYGRNIEL + + +L T +M +R +G AEYL EDG WY WFTGSDGQ YNLTHVF+TTDFDQLHIATIQSA S NLEAA HNRYVRLLI CSNQVNHEDGYLIF+VGGQDFDESCDDH GLCV D PD DTDSG+RCETGIG+AYVLTFVV LSLLL Sbjct: 15 EEAIDCTGDSWRHQAADGEWKTELSFPATWESSDAAPIVSFEGFFYAIGDVEVMISGIPTSIAPAVADSLYGRNIELLWLATKR---IPSSWRSILACYSKWALRTTAQRSMLTWR-----------------------------------------SSGSKAEYLREDGAWYSWFTGSDGQRYNLTHVFFTTDFDQLHIATIQSARSLNLEAASHNRYVRLLILCSNQVNHEDGYLIFQVGGQDFDESCDDHLGLCVDDDPDGDTDSGVRCETGIGIAYVLTFVVGMLSLLL 263
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Match: D7FPM7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM7_ECTSI) HSP 1 Score: 258 bits (659), Expect = 8.010e-80 Identity = 134/259 (51.74%), Postives = 179/259 (69.11%), Query Frame = 1 Query: 190 NPIVYLSDDGTEEA--VDCTGDSWRYQAANG-EWKTELSFPVTWESSDAAPTVSFEGFFNATGDGEVTVSGIPTSIAPAVSDSLYGRNIELALTCNQEDHIVMEEDSCVLFQVDFTNYSPTFDVNM---ALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSSGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKVG 948 NPIVYL ++ + V+C+ DSWRY N + T ++FP +++ A VS G F A E+ + A A+SDSL+GR IE+AL+C+Q V EDSC+ FQ++FTN SP D + AL+RF++PAVPG+ +PLA SPGD+ LNEGNP+V++DGS GCNG+++EYLGEDGEWY++FTGSDG YN+THVFY T+ D L++A IQ+ WSPNLE AL NR VR+ I+C+N EDGY+IFKVG Sbjct: 60 NPIVYLVNENVYDRYQVNCSVDSWRYLLDNNVTYATNVTFPDA-NATENATEVSVPGLFAAESH-ELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQ-TVTAEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNAYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNVNEREDGYVIFKVG 315
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI) HSP 1 Score: 176 bits (446), Expect = 8.580e-46 Identity = 110/269 (40.89%), Postives = 156/269 (57.99%), Query Frame = 1 Query: 205 LSDDGTEEAVD--CTGDSWRY-QAANGEWKTELSFPVTWESSDAAPTVSFEGFFNATGDG--EVTVSGIPTSIAPAVSDSLYGRNIELALTCNQEDHIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSSGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKVGGQDFDESCDDHSGLCV 996 ++++ EE+ + CTG S ++ NGEW++ + ES D + F+ + DG E+ V+ I + +AP++ + L ++L LTC ED++V+ DSCV+F+ FTN+SP D A +RF DPA+P ++P A P SPGD+ L N VV G+ + CNGD AEY GEDG WY F SDG+ + L HVFY T D L+ ATIQ+ W PNL L NR VRL ++C+N E YL +V G+ +CDD LC Sbjct: 412 ITENALEESEERGCTGSSAQFWDPKNGEWRSTFE-TIDGESHD------LDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTC-PEDNVVV--DSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGETHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAE--YLYIRVSGESA--TCDDIEDLCT 665
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI) HSP 1 Score: 174 bits (442), Expect = 4.000e-45 Identity = 108/256 (42.19%), Postives = 147/256 (57.42%), Query Frame = 1 Query: 238 CTGDSWRY-QAANGEWKTELSFPVTWESSDAAPTVSFEGFFNATGDG--EVTVSGIPTSIAPAVSDSLYGRNIELALTCNQEDHIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSSGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKVGGQDFDESCDDHSGLCV 996 CTG S ++ NGEW++ + ES D + F+ + DG E+ V+ I + +AP++ + L ++L LTC ED++V+ DSCV+F+ FTN+SP D A +RF DPA+P ++P A P SPGD+ L N VV G+ + CNGD AEY GEDG WY F SDG + L HVFY T D L+ ATIQ+ W PNL L NR VRL ++C+N E YL +V G+ +CDD LC Sbjct: 424 CTGSSAQFWDPKNGEWRSTFE-TIDGESHD------LDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTC-PEDNVVV--DSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGDTHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLRVYCTNDERAE--YLYIRVSGESA--TCDDIEDLCT 664
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI) HSP 1 Score: 173 bits (439), Expect = 4.270e-45 Identity = 107/256 (41.80%), Postives = 148/256 (57.81%), Query Frame = 1 Query: 238 CTGDSWRY-QAANGEWKTELSFPVTWESSDAAPTVSFEGFFNATGDG--EVTVSGIPTSIAPAVSDSLYGRNIELALTCNQEDHIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSSGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKVGGQDFDESCDDHSGLCV 996 CTG S ++ NGEW++ + ES D + F+ + DG E+ V+ I + +AP++ + L ++L LTC ED++V+ DSCV+F+ FTN+SP D A +RF DPA+P ++P A P SPGD+ L N VV G+ + CNGD AEY GEDG WY F S+G+ + L HVFY T D L+ ATIQ+ W PNL L NR VRL ++C+N E YL +V G+ +CDD LC Sbjct: 364 CTGSSAQFWDPKNGEWRSTFE-TIDGESHD------LDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTC-PEDNVVV--DSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTRTGATTETYCNGDSAEYSGEDGYWYNEFVKSNGETHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAE--YLYIRVSGESA--TCDDIEDLCT 604 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.792.1 >prot_Ecto-sp6_S_contig101.792.1 ID=prot_Ecto-sp6_S_contig101.792.1|Name=mRNA_Ecto-sp6_S_contig101.792.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=368bp MPRCRHSLAAGLSALCLGRQAAVARASSCAYRFASFPNVSDLPVWNLPASback to top mRNA from alignment at Ecto-sp6_S_contig101:250968..253564- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.792.1 ID=mRNA_Ecto-sp6_S_contig101.792.1|Name=mRNA_Ecto-sp6_S_contig101.792.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2597bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:250968..253564- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:250968..253564- >mRNA_Ecto-sp6_S_contig101.792.1 ID=mRNA_Ecto-sp6_S_contig101.792.1|Name=mRNA_Ecto-sp6_S_contig101.792.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1104bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:250968..253564- (Ectocarpus species6 EcLAC_371)back to top |