mRNA_Ecto-sp6_S_contig101.787.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: D7FPM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM1_ECTSI) HSP 1 Score: 639 bits (1648), Expect = 8.390e-227 Identity = 359/372 (96.51%), Postives = 359/372 (96.51%), Query Frame = 3 Query: 36 MAEEDQDGFGGLFDGASASDDGDSGGEETGPALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKRR 1151 MAEEDQDGFGGLFDGASASD EETGPALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATS DAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLS RHENGGGSSSDGEKN SLGSGAAXXXXXXXXXXXXXXAGAPVQ TGTEEEVASVHGQGEGS RSCHRARPIGGGG DGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXX TVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKRR Sbjct: 1 MAEEDQDGFGGLFDGASASDXXXXXXEETGPALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSLRHENGGGSSSDGEKNASLGSGAAXXXXXXXXXXXXXXAGAPVQDTGTEEEVASVHGQGEGSPRSCHRARPIGGGGGDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXX-TVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKRR 371
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A6H5JE74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE74_9PHAE) HSP 1 Score: 446 bits (1146), Expect = 6.170e-152 Identity = 260/288 (90.28%), Postives = 267/288 (92.71%), Query Frame = 3 Query: 291 MVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGS-SRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKRR 1151 MVDKDE DVRGKRVLELGAGAGLP+LICALKGATKVVISDYATS DAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDL PLRTGSSLS RH+NG GS SDGEKNV LGS AA XXXXXXXXXXXXXAGAPVQATGTEEE+ S +GQGEGS CHR RPI GGG DGEGFDVVIMADLLFNRSQHAQLLETC RCLLGRGSXXXXXXXXXXXXXX T+WVSFSHHDPEKAELDMKFFELAK+KGFVATRIKTVQMRDLFVENDGLDDLRG+VHLWCLKRR Sbjct: 1 MVDKDELDVRGKRVLELGAGAGLPSLICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLRAPLRTGSSLSLRHDNGVGSRSDGEKNVILGSVAADXXXXXXXXXXXXXAGAPVQATGTEEEIESGYGQGEGSPGGGCHRTRPIAGGGGDGEGFDVVIMADLLFNRSQHAQLLETCGRCLLGRGSXXXXXXXXXXXXXX-TMWVSFSHHDPEKAELDMKFFELAKDKGFVATRIKTVQMRDLFVENDGLDDLRGEVHLWCLKRR 287
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A836CF85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF85_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.780e-52 Identity = 121/315 (38.41%), Postives = 153/315 (48.57%), Query Frame = 3 Query: 204 PSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELA----KEKGF--VATRIKTVQMRDLFVENDGLDDLRGQVH 1130 PSTL L+LV+SRHSLWGH LWNA++ LA+M D E D++GK VLELGAGAGLP LI AL GA+ V+I+DY TS D L+ I+ NID + P VP+ LHA HVWG +V+ LL L +G FDV+++ADLLFNRS+H +LL+TC L G TVWV++ HHDP KA LD+KFFE+A E GF + VQ DLF E+DG+D+ RG V+ Sbjct: 5 PSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPH-VPKECLHAAPHVWGGSVQPLLDVLG-----------------------------------------------------------------------------------EGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGG----------------TVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 219
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: K8Z697_NANGC (Nicotinamide n-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z697_NANGC) HSP 1 Score: 165 bits (418), Expect = 1.800e-43 Identity = 124/342 (36.26%), Postives = 156/342 (45.61%), Query Frame = 3 Query: 42 EEDQD-----GFGGLF---DGASASDDGDSGGEETGPALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDR-VQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEK 1040 EE+QD G LF D A+ S +SG E++ P L YTR P ALP L++SL++ RHSLWGH+LWNAA +L +M+D V+GK LELGAGA LP+L+ AL GA +VV SDYATS D L+ +Q NIDR V F+P L AVG+VWGQ + LL PL+ E GGG S F V++ ADL+FNRS+H +LL TC CL G V V++SHHDP K LDM FF LA ++ Sbjct: 17 EEEQDWELEQGLLSLFATSDKANPSSAENSGEEDSSPMLTTHTYTRRDPT-------ALP---LELEISLLSCRHSLWGHKLWNAAKVLGEMIDSRPSLVQGKYCLELGAGAALPSLLAALNGARRVVCSDYATSTDRVLVAAMQTNIDRLVAQAFLPHDVLRAVGYVWGQPINSLLAPLQ--------EEKGGGVSK----------------------------------------------------------------------FQVILCADLIFNRSEHKKLLWTCKTCLEEDGE----------------VLVTYSHHDPGKRALDMAFFALATQE 254
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A6H5JAL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAL4_9PHAE) HSP 1 Score: 150 bits (379), Expect = 9.090e-40 Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 3 Query: 24 LASLMAEEDQDGFGGLFDGASASDDGDSGGEETGPALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADM 293 +ASLMAE+ QDGFGGLFDGAS SD GGEE GPALVEE YTRTPP GSA GRGALPPRPSTL+LSLVNSRHSLWGHRLWNAALLLA M Sbjct: 1 MASLMAEDGQDGFGGLFDGASTSDXXXXGGEEAGPALVEEIYTRTPPTGSAGGRGALPPRPSTLRLSLVNSRHSLWGHRLWNAALLLAGM 90
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A482T280_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T280_9ARCH) HSP 1 Score: 138 bits (347), Expect = 1.240e-32 Identity = 104/330 (31.52%), Postives = 157/330 (47.58%), Query Frame = 3 Query: 207 STLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRV---------------LELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEK-GFVATRIKTVQMRDL-FVENDGLDDLRGQVHLWCLK 1145 + L+L+L+N HSLW ++NAA L+AD++ + D + LELGAGAGLP ++ A+ GA +VVISDY + D +L+ PI N++ ++ LHAV + WG + PL T ++ ++H + ++ L S AA + + + G+G+ H I ED E FD + +ADL+FNRS+H +LL T CL +V+FSHHDP KA LD+ FF LA+E+ G ++ V + F E+DGLD+ RG VH + L+ Sbjct: 81 NVLQLALLNKHHSLWAEFIYNAARLMADIIVLPQADGSNSAIENALPPIVIESSDNCLELGAGAGLPGIMAAVCGARRVVISDYGSDLDLSLIYPIDSNVEYIKRICSSVAELHAVAYTWGYPI----YPL-TNTTQYYQHT---------DTSLDLTSYAAY----------------------VQSKTSRRVGKGD------HHGIMI----EDYEKFDKIFLADLVFNRSEHRKLLWTVRECL---------------KPDKGVCYVTFSHHDPSKAALDLNFFTLAEEEFGLRVCKLGEVMRQSYPFRESDGLDEKRGVVHFYTLQ 349
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A8E2AM30_9APHY (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2AM30_9APHY) HSP 1 Score: 125 bits (313), Expect = 1.300e-28 Identity = 93/314 (29.62%), Postives = 130/314 (41.40%), Query Frame = 3 Query: 210 TLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDR-VQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKR 1148 T+ + LV S H LWGH LWNAA A +D RG+ VLELGAG GLP+L+ A GA V++DY DA+LM + N+ R + PE P + G++WG+ V LL +Q TE + G+D++IM+DL+FN SQH LL TCD L R + + V ++HH P A DM+FF A+ G++ I T + +F E+ G +++R VH W L R Sbjct: 54 TIDIRLVGS-HPLWGHYLWNAARAFATYLDHHPELYRGRAVLELGAGGGLPSLVAAKNGAQLAVVTDYP---DASLMDNLNYNVQRNIPPEVAPR--VRVEGYIWGKPVSHLLE---------------------------------------------------IQHDATESD-----------------------------GYDLIIMSDLIFNHSQHDALLRTCDEALSKRSAPDASGSPVP------ALLVFYTHHRPHLAHRDMEFFLKAQGSGWLCEEILTQKFPPMFPEDSGEEEVRATVHGWRLTR 275
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A550CQR3_9AGAR (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550CQR3_9AGAR) HSP 1 Score: 122 bits (307), Expect = 5.840e-28 Identity = 87/313 (27.80%), Postives = 129/313 (41.21%), Query Frame = 3 Query: 210 TLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKR 1148 ++++ LV H LWGH LWNAA + +D ++ +G+ VLELGAG GLP L+ AL GA KVV++DY DA L+ + N + P + + G++WG V LL L G +GFD+VI++DL+FN SQH LL+TC++C S V V ++HH P A DM+FF A+E+G+ + T + +F ++ G +++R VH W L R Sbjct: 45 SIEIRLVGD-HPLWGHYLWNAARAFSTYLDSNQELYKGRNVLELGAGGGLPGLVTALDGAQKVVLTDYP---DATLVDNLDFNTQQNLPASIA-ANVAVQGYIWGTPVAPLLEKLPAGR----------------------------------------------------------------------------------QGFDLVILSDLIFNHSQHDALLKTCEQCTAEPSSAAPPY-----------VLVFYTHHRPHLAHRDMEFFAKARERGWSCQEVLTERFPPMFPDDPGAEEVRSTVHGWRLTR 259
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: F4P3R6_BATDJ (Protein N-terminal and lysine N-methyltransferase EFM7 n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P3R6_BATDJ) HSP 1 Score: 122 bits (305), Expect = 1.300e-27 Identity = 90/306 (29.41%), Postives = 126/306 (41.18%), Query Frame = 3 Query: 213 LKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVH 1130 K++LV +HSLW H LWNA +++ +DK++ V GK VLELGA A LP +ICAL GA KVV +DY D AL+ I +N PEF+ T+ G +WG+ +L L S F D++++ADL+FN +QH LL++C L G V+ +F+HH + A DMKFFE A E GF +I + + +F E+DG D+R VH Sbjct: 59 FKVNLVG-KHSLWAHWLWNAGKSMSNYLDKNKNMVAGKNVLELGAAAALPTMICALNGAKKVVSTDYP---DPALLNNIILNARENTPEFLENNTIVVEGFIWGEDHTKVLEHLSDDGSTKF---------------------------------------------------------------------------------DLILLADLIFNHNQHTNLLKSCREMLAPGG----------------VVYTTFTHHVVKWAYRDMKFFETATEMGFKFEKIYQERWQCMFPEDDGDVDVRSTVH 263
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Match: A0A4Q0A035_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A035_9FUNG) HSP 1 Score: 120 bits (300), Expect = 8.050e-27 Identity = 94/325 (28.92%), Postives = 133/325 (40.92%), Query Frame = 3 Query: 177 EGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSADAALMVPIQINIDRVQPEFVP----EGTLHAVGHVWGQAVEDLLVPLRTGSSLSFRHENGGGSSSDGEKNVSLGSGAAXXXXXXXXXXXXXXAGAPVQATGTEEEVASVHGQGEGSSRSCHRARPIGGGGEDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXATVWVSFSHHDPEKAELDMKFFELAKEK-GFVATRIKTVQMRDLFVENDGLDDLRGQVHLW 1136 E P P+++++ LV S H LWGH LWNAA L + +D + V+GK VLELGAGA LP+++ L GA +VVI+DY D LM I+ N+DR P + G G +WG LL L S S ++++ +R FD++I+ DL+FN SQH QLL TC CL ++V F+HH P A D+ FF A+E+ GF + T M +F ++ G +R VH + Sbjct: 11 EAENVQPGTPASVQVRLVGS-HPLWGHMLWNAAKLFSHYLDAHKALVQGKNVLELGAGAALPSIVATLNGARRVVITDYP---DIDLMNNIRFNVDRTLPGYTTAPGGSGQARVEGFLWGADSTPLLNLLADEPSSSXXXXX----------------------------------------------XXXXXXXXXXAAKAGNRK------------FDLIILCDLIFNHSQHTQLLRTCRECL-----------DTSDPAHPGEIYVFFTHHRPHLAHRDLAFFTKAQEEFGFESEEFMTRMMIPMFEKDQGPASVRATVHCY 262 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.787.1 >prot_Ecto-sp6_S_contig101.787.1 ID=prot_Ecto-sp6_S_contig101.787.1|Name=mRNA_Ecto-sp6_S_contig101.787.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=373bp MAEEDQDGFGGLFDGASASDDGDSGGEETGPALVEEEYTRTPPKGSAEGRback to top mRNA from alignment at Ecto-sp6_S_contig101:200073..204229- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.787.1 ID=mRNA_Ecto-sp6_S_contig101.787.1|Name=mRNA_Ecto-sp6_S_contig101.787.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4157bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:200073..204229- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:200073..204229- >mRNA_Ecto-sp6_S_contig101.787.1 ID=mRNA_Ecto-sp6_S_contig101.787.1|Name=mRNA_Ecto-sp6_S_contig101.787.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1119bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:200073..204229- (Ectocarpus species6 EcLAC_371)back to top |