mRNA_Ecto-sp6_S_contig101.779.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: D7G2U6_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U6_ECTSI) HSP 1 Score: 1282 bits (3318), Expect = 0.000e+0 Identity = 668/688 (97.09%), Postives = 671/688 (97.53%), Query Frame = 1 Query: 1 MASSAVAGEDVEVGSSRVCPAEPLSKLWKSPGDQKVDFRFRDVRFSVEVSKMKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAEASTTLVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRSIF 2058 MASSAVAGEDVEVGSSRVCPAEPLSK WKSPGDQKVDFRFRDVRFSVEVSKMKASLMGGEAGVKHIL GVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASET VIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQRE QADEMTPRHCGTLPCFPL LAPSTTTPIP FSQHYTV ILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYAL RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE NGQYGVAGFCIANAVVQ PFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAE VLDSLSNGGTNLNDV+IAAWCGALVGLS+VWRL+HYVALKRSIF Sbjct: 1 MASSAVAGEDVEVGSSRVCPAEPLSKPWKSPGDQKVDFRFRDVRFSVEVSKMKASLMGGEAGVKHILGGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETDVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQRERRQADEMTPRHCGTLPCFPLSLAPSTTTPIPRFSQHYTV-ILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYAL-RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKEVQNGQYGVAGFCIANAVVQVPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAE-----VLDSLSNGGTNLNDVSIAAWCGALVGLSVVWRLIHYVALKRSIF 681
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: A0A6H5JKZ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ7_9PHAE) HSP 1 Score: 920 bits (2377), Expect = 0.000e+0 Identity = 512/740 (69.19%), Postives = 551/740 (74.46%), Query Frame = 1 Query: 19 AGEDVEVGSSRVCPAEPLSKLWKSPGDQKV--------------------------------------DFRFRDVRFSVEVSKMKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKENGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAEASTTLV----------------------LDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRSIF 2058 AG+D+E+GS P EP+ KLW SP QKV DFRFRDVR+SVEVS+ KASLMGGEAGVK IL+GVSG VESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITG+VTVNGK MSKSFFLENAAYVPQEDRLWSALTVRENL FACKMYSPALSR + +KRV+KVLASLGLEGCQH KVGNVFLKG+SGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIM+LL+ LASETGVIII SVHQPSSRVFNSFDQ VILLTMGQTAYFGPA DSLDHFA LGHEP+GLVNPADYLLEITN+DFSD +AVQ LAD WKETP RALNAR+EAPL PPL EGSKAG+ +A LQLR L+ RASMNSVRDPAAYAL RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFE EK+AV NGQYG+A FC+ANAVVQAPFVLLIALCC TPVYWITDMNDDP+RYLQF+++MFLMLFV+ESLAQLVGV+VKNFVLGIAVFAS LSMFFIFNG YSWEAMA+IV +GQTYAG+DTCVTCYGTTG +ASTTLV LDSLSNGGTNLNDV+I AWCGALVGL++ WR++HYVALKRSIF Sbjct: 5 AGQDLELGSQNG-PVEPVGKLWDSPIQQKVGNAPHHLMRAYHQTQIFRGCSRLTHALPPKPTTFTLQVDFRFRDVRYSVEVSQTKASLMGGEAGVKQILKGVSGGVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGEVTVNGKTMSKSFFLENAAYVPQEDRLWSALTVRENLMFACKMYSPALSRGECNKRVDKVLASLGLEGCQHIKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKHLASETGVIIITSVHQPSSRVFNSFDQ---------------------------------------------------------------VILLTMGQTAYFGPAVDSLDHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPAYRALNARIEAPLSPPLTEGSKAGWFSATLQLRELVARASMNSVRDPAAYAL-RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAV---NGQYGIAAFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVVVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNG----------------------YSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTTLVVDMHMHLFVIVRTNTQALLSSVLDSLSNGGTNLNDVSIGAWCGALVGLALGWRVIHYVALKRSIF 654
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: A0A6H5JKJ8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ8_9PHAE) HSP 1 Score: 803 bits (2075), Expect = 7.430e-282 Identity = 448/666 (67.27%), Postives = 490/666 (73.57%), Query Frame = 1 Query: 106 VDFRFRDVRFSVEVSKMKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKV-GNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNS-----------YMDMAAIPVFELEKEAVV--KENGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAEASTT----LVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKR 2049 VDFRFRDVR+SVEVSK KASLMGG+AGVKHILRGVSGAVESGQILAIIG SGAGKTSLLDVLVGK+SAGTKGLD+TGD+TVNGK MSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSP +SR + +KRV KVLA LGLEGCQHTKV GNVFL+G SGGQKRRTSIGVELV QRKILFLDEPTSGLDAASASEIM LL LAS+TG+III+SVHQPSSRVFNSFDQ VILLTMGQTAYFGPA DSLDHFARLGHEPKGLVNPADYLLEITN+DFSDT AVQ LAD+WKETP C+ L+ARL AP PPL EGSKA +L+ALLQLR L+VRA MNS+RDPA YALS YY+VENTQEDILNRVFLI+WINAFNS + P L + V ++NGQY VA FCIANAVVQAPFVLLIALCC TP YWITDMNDDP+RYLQF++LMFL+LFV+ESLAQ+VGV+VK+ L F P RYSWEAM +IVF+GQTY G D+CVTC+G TG +ASTT DSLSNGG N NDV+IAAWC LVGLS+VWR+VHYVALK Sbjct: 4 VDFRFRDVRYSVEVSKTKASLMGGKAGVKHILRGVSGAVESGQILAIIGPSGAGKTSLLDVLVGKISAGTKGLDVTGDITVNGKVMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMMSREECNKRVGKVLARLGLEGCQHTKVVGNVFLRGTSGGQKRRTSIGVELVFQRKILFLDEPTSGLDAASASEIMDLLSGLASDTGMIIISSVHQPSSRVFNSFDQ---------------------------------------------------------------VILLTMGQTAYFGPAVDSLDHFARLGHEPKGLVNPADYLLEITNSDFSDTNAVQRLADAWKETPACQVLDARLHAPASPPLAEGSKASWLSALLQLRALVVRAWMNSLRDPAVYALS-YYRVENTQEDILNRVFLIIWINAFNSSPGICKKHTDCFPKYVLDPTLPLHRTLVTLPQQNGQYAVASFCIANAVVQAPFVLLIALCCSTPAYWITDMNDDPVRYLQFVVLMFLLLFVVESLAQVVGVLVKDH----------LKAF--------RPGG--------------RYSWEAMVKIVFDGQTYEGFDSCVTCFGRTGEQASTTCSYRFCQDSLSNGGINYNDVSIAAWCCTLVGLSLVWRVVHYVALKH 573
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: D7G2W0_ECTSI (ATP transporter, putative MET type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W0_ECTSI) HSP 1 Score: 637 bits (1643), Expect = 3.640e-223 Identity = 343/481 (71.31%), Postives = 374/481 (77.75%), Query Frame = 1 Query: 169 MGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLR 1605 MGG AGVK ILRGVSGAVESGQILAIIGSSG+GKTSLLDVLVG+++ TKGL ITG+VTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENL ACKMY P +SRA+ D RV++VL SLGLE CQHTKVGN+FLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASAS IM LLRRLASETGVIII SVHQPSSRVFNSFDQ VILLTMGQTAYFGPA DSLDHFA LGH+P GLVNPADYLLEITN+DFSD +AVQ LAD+WK++ C+ L++RL PLPP LE +AG+++ L QLR LI RA+M+SVRDPAAYAL RYY+VENTQEDILNRVFLI+W+NAFNSYMDMAAIP F EK+AVVKE NGQYGVA FCIANA+VQAPFVLLIA+CC TPVYW TDMNDDP R Sbjct: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLHITGNVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLMLACKMYIPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQ---------------------------------------------------------------VILLTMGQTAYFGPAVDSLDHFASLGHQPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLRGPLPPSLEAKPEAGWMSNLRQLRALIARATMSSVRDPAAYAL-RYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANAIVQAPFVLLIAICCSTPVYWTTDMNDDPTR 417
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: D7G3K1_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K1_ECTSI) HSP 1 Score: 562 bits (1449), Expect = 7.030e-194 Identity = 311/437 (71.17%), Postives = 333/437 (76.20%), Query Frame = 1 Query: 19 AGEDVEVGSSRVCPAEPLSKLWKSPGDQKVDFRFRDVRFSVEVSKMKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYAL 1329 AGED+E G SR A PL K SP + KVD RFRDVR+SVEVSK KASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSA TKGL+ITGDV VNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSP LSR + KRV++VL SLGLEGCQHTKVGN+FLKG SGG+KRRTSIGVELV RKILFLDEPTSGLDA SASEIM LLR LAS+TG+III SVHQPSSRVFNSFDQ V+LLTMGQTAYFGPA DSL HFARLGHEPKGLVNPADYLLEITN+ FSDT+AVQ LAD+WKETP CRAL+ RL AP+ PPL EGSKAG+L++ LQLR L+VR SMNS+RDPA YAL Sbjct: 38 AGEDLERG-SRNGAAAPLGKPRNSPDEPKVDLRFRDVRYSVEVSKTKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSARTKGLNITGDVNVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMLSRGECSKRVDEVLVSLGLEGCQHTKVGNIFLKGTSGGEKRRTSIGVELVFLRKILFLDEPTSGLDAGSASEIMDLLRGLASDTGMIIITSVHQPSSRVFNSFDQ---------------------------------------------------------------VMLLTMGQTAYFGPAVDSLAHFARLGHEPKGLVNPADYLLEITNSHFSDTKAVQRLADAWKETPACRALDTRLCAPVSPPLAEGSKAGWLSSFLQLRALVVRTSMNSLRDPAVYAL 410
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: A0A7S2RHB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHB7_9STRA) HSP 1 Score: 407 bits (1045), Expect = 3.070e-129 Identity = 252/682 (36.95%), Postives = 373/682 (54.69%), Query Frame = 1 Query: 118 FRDVRFSVEVSKMKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSA-GTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADS-DKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRK-ILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWK-------ETPGCRALNAR----LEA-PLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALS-------------RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVT-----CYGTTGAEASTTLVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRSIF 2058 F+D+ FSV +K+ A L GG+ G IL G+SG V SG +AI+G SGAGKT+LL+ L + S + + + G VT++G+ +++S+F ++ A+VPQ D LW A+T ENL +A ++Y ++ + ++ ++ LGL C+ KVGNVFLKG+SGGQKRR S+G ELV RK ILFLDEPTSGLDAASASEIM L+RR+A +I+ S+HQPSS VF +FD+ ++LL+ G +A+FG A+DSL +F +GH+ +NPAD+LLE+ N+DF+D VQ + D+WK E P ++ +E P+P P + + + + + L+ RA RDPA Y L Y V +D+ +R+F I+W+ AF SYM M A+P F LEK +VKE NG Y + + +A A++Q P ++L A YW +N R+L ++++ L+V+ESLA LV ++ NFVLG+ VF S LS F+FNGFFI NMP + +W+Y+ SP Y+ +A+ ++ F G G C+ CYG TGA+ VLDS+S+ NDVN W L+ ++ R Y+A++++++ Sbjct: 75 FQDITFSVTNTKLGALLTGGQVGTHQILHGISGRVISGMAMAIMGPSGAGKTTLLETLARQPSVVNNENIALGGSVTIDGEQLTRSYFAKHCAFVPQYDALWPAMTAVENLEYAARLYGDFGGDVENMNAAISDIMEELGLSSCKDVKVGNVFLKGLSGGQKRRLSLGCELVSGRKEILFLDEPTSGLDAASASEIMKLIRRIAKIFNLIVCCSIHQPSSHVFFAFDR---------------------------------------------------------------LLLLSGGHSAFFGQAADSLAYFETIGHKMSRTMNPADFLLEVVNSDFTDKAGVQAVIDAWKHHAKDYAEAPAKSFVDEEQGGAIEVKPVPGPTGDSVVSQGSSPMGRTMLLMSRAFKCYSRDPALYLLRFAMYGFMSVFLGVTYIDVSRDNQDVSDRLFCIMWMIAFFSYMGMVALPAFSLEKTIIVKEITNGSYTLGEYVLAIALIQIPLIVLCATIASIGPYWFPVLNPLFTRWLVYVVIFSAHLYVVESLAILVAGLIPNFVLGLIVFCSALSQMFVFNGFFISVGNMPVYLIWIYYTSPFAYTTQALFKVAFSGLDMLGYQKCLNRAEYPCYGRTGAQ-----VLDSISDADLEYNDVNPWHWFLVLIAFAVALRFQFYLAVRKAVY 688
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: A0A7S3YAG1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YAG1_9EUKA) HSP 1 Score: 399 bits (1025), Expect = 7.510e-127 Identity = 252/679 (37.11%), Postives = 367/679 (54.05%), Query Frame = 1 Query: 100 QKVDFRFRDVRFSVEV-SKMKASLMGGEAG-VKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSW--------KETPGCRALNARLEAPLPPPLEEGSKAGYLAALL-QLRTLIVRASMNSVRDPAAY--------ALSRYYQV------ENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCV-TCYGTTGAEASTTLVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRS 2052 +K RF D+R SV V S M G G K IL+G+SG+ SG++LAIIG+SG+GKT+LLD L + G + +G +TVN + M+ FF + AYV Q+DRLW ALTV ENL A K+YSP +S + R+ +L + GL+ C+HTKVGNV +KGISGGQ+RR SI VEL+ ILFLDEPTSGLD+ SA+EIM LL ++A V+I+ S+HQPS+R F +FD + +LL+ G+ AYFGPA SL +F +LG +NPAD+L+EI+N DF+ E V +L W KE G + ++E ++GS Y ++ Q+ L R + + VRDP AY +S + + E +QE +L+ +F I W A SYM +PVF E KE NG Y + +A+++VQ FVL + + P YWI ++NDDP R+ QF LL ++ L+ IESL + ++ NFV+ + V S LS FF+FNG F+ P ++P + W+ +ISP RY+ + ++ + F GQ+++G DTC +C+G G + VLD++ +D N+ G L+ ++V RL H+ L+++ Sbjct: 44 EKYTLRFEDIRVSVSVPSWMPEFATPGVPGQTKQILKGISGSASSGEVLAIIGASGSGKTTLLDQLAHQPLM--SGGEFSGTLTVNEQPMTNKFFKAHCAYVHQDDRLWGALTVYENLENAAKLYSPNISAEERKDRIEMILEATGLQSCKHTKVGNVLIKGISGGQRRRVSIAVELMGSPAILFLDEPTSGLDSKSAAEIMELLNQIAKRLNVLIVCSIHQPSTRTFLAFD---------------------------------------------------------------LTLLLSKGKVAYFGPAKSSLSYFEKLGFTAPAQMNPADFLIEISNPDFTSPEQVNDLIAKWDAQYETERKEKEGTGSDTDKVEP------KQGSP--YASSFFWQVFVLTSRMTKSYVRDPGAYIGRAVLYTTMSTIFGIIYLGAREKSQEHVLDILFAIAWGMATPSYMATMIMPVFTYESATFAKEAKNGMYAPGAYVLASSLVQTIFVLFTSTLSVVPYYWIVNINDDPARFFQFWLLQYVFLYTIESLCIVFASVIPNFVIALGVVVSTLSNFFVFNGLFVTPDSVPWVFRWIEYISPHRYAMQGLSFLAFSGQSFSGFDTCTASCFGDNGDD-----VLDNIQG---LSSDTNVGLMFGVLIAEAVVLRLAHWFILRKA 641
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: D7G3K2_ECTSI (ABC transporter family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K2_ECTSI) HSP 1 Score: 379 bits (974), Expect = 8.290e-125 Identity = 186/245 (75.92%), Postives = 214/245 (87.35%), Query Frame = 1 Query: 1330 SRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAEASTTLVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRSIF 2058 S YY++ENTQEDILN LI+WINAFNSYMD+AAIPVF LEKEAVVKE +GQY VA FCIANAVVQAPFVLLIA CC TPVYWITDMNDDP+RYLQF+++MFL+LFV+ESLAQLVGV+VK+F+LGIA+FAS LS+F++FNGFF+DP N PD WLWLYWISPLRYSWEAM +IVF+GQTY G D+CVTCYG TG + VLDSLS+GGTN NDV++ AWC AL G S+VWR+VHYVALK SIF Sbjct: 7 SVYYRLENTQEDILNWANLIIWINAFNSYMDLAAIPVFALEKEAVVKEVQHGQYAVASFCIANAVVQAPFVLLIAFCCSTPVYWITDMNDDPVRYLQFVMVMFLLLFVVESLAQLVGVLVKSFILGIAIFASFLSIFYMFNGFFVDPNNTPDGWLWLYWISPLRYSWEAMVKIVFDGQTYGGFDSCVTCYGRTGEQ-----VLDSLSHGGTNFNDVSVVAWCCALAGFSLVWRVVHYVALKCSIF 246
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: A0A7S0QS61_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QS61_9CHLO) HSP 1 Score: 389 bits (1000), Expect = 3.510e-123 Identity = 237/669 (35.43%), Postives = 365/669 (54.56%), Query Frame = 1 Query: 118 FRDVRFSVEVSKMKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSA-GTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRK-ILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHF-ARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALS-------------RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVT-----CYGTTGAEASTTLVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRSI 2055 F ++ F ++V+K+ L GG+ GV+ IL+ VSG V SGQ++AIIG SGAGKT+LLD L + + ++G V V+G+ MSK FF E AY+PQ+D L +ALT +E+L ++ ++Y A +S+ + LGL GC VG+VF++G+SGGQKRR S+ EL+ K I FLDEPTSGLDAA+A+EIM ++ + A + V+++ASVHQPSSRVF +FDQ +++L+ G+TA+ G A+D+L++ + G P +NPAD+++E+ NADF+D + V + D W C + P P ++GS + L R +RDPA Y YYQ+ Q D+++R+F I+W+ AF SYM M A+P F LEK +VKE NG Y + + + N+++Q P L++A+ +T +WI ++N + RY+ F+ +M L+V+ES+A L+ ++ NFVLG+ F S LSM F+FNGFF+ N+PDF +WLY+IS Y+ A+ +IVF+ +G D C+ CYG +G + VL ++S+ + N+ N LV +++ R ++ L+ + Sbjct: 43 FDNLTFDIKVTKLGTFLHGGKVGVRRILQDVSGRVASGQVMAIIGPSGAGKTTLLDTLASQPHVVNNNNITVSGVVAVDGEKMSKDFFSERCAYLPQQDALCTALTTKEHLAYSARLYGVASDELESN--CTTTMKDLGLTGCADVMVGSVFIRGLSGGQKRRLSLACELIAGNKAIYFLDEPTSGLDAAAATEIMKVVTQAAKQRNVVMVASVHQPSSRVFYAFDQ---------------------------------------------------------------LLVLSKGRTAFCGQAADALEYLDTKCGLRPAMAMNPADFVVEVVNADFADPKQVDAILDKWA---ACSSNQLAPSTPKSP--KKGSHGRSWLVPSRSLALTSRTLRLYIRDPAVYTFRFMLYTFMSCFLGVTYYQLTYDQRDVMDRMFTIVWVVAFFSYMSMVALPSFALEKFLIVKEITNGSYSLGEYVLINSLIQIPLCLMLAILSVTLAFWIPELNPNFDRYISFVAIMAAHLYVVESVAILLAAVIPNFVLGLIFFVSFLSMNFVFNGFFVSVANIPDFLIWLYYISFFSYTNRALFKIVFDDLDMSGYDKCLELSKYPCYGESGHD-----VLAAISSDKLDYNETNAYEMFAVLVAMAVALRTCFFIYLRMVV 636
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Match: A0A7S4DWD4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWD4_9EUKA) HSP 1 Score: 343 bits (881), Expect = 1.600e-105 Identity = 224/664 (33.73%), Postives = 342/664 (51.51%), Query Frame = 1 Query: 118 FRDVRFSVEV-SKMKASLMGGEAGVK-HILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETGVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQREPHQADEMTPRHCGTLPCFPLPLAPSTTTPIPPFSQHYTVVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAAL-LQLRTLIVRASMNSVRDPAAY--------ALSRYYQV-----ENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKE--NGQYGVAGFCIANAVVQAPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCV-TCYGTTGAEASTTLVLDSLSNGGTNLNDVNIAAWCGALVGLSMVWRLVHYVALKRS 2052 F DVR SV + S + A G G IL+G+ G V SG++LAI+G+SG+GKT+LL+ L + G +G VTVNG ++ FF + A++ +DRLWSALTV EN+ FA K+Y P LS + ++RV ++L + GLE C +TK GN+F+ G+S GQ+RR SI VEL+ ILF+DEPT GLD+ SASEIM++L LA + V +I S+H+P++R F +FD+ L +L+ GQTAYFGP + D+FA +G E NPAD+ LEITN DF+ V ++ +W+ + + Y ++ Q+ ++ R ++ RDP +Y ++S + + + QE +L+ +F + ++ A SYM + F+LE + + KE NG Y + IA+++VQ PFV I + P YW+T NDDP R+ QF+ ++FL L++ ES+ V N +L I S LS+ F+FNG F+ P + W+ ++SP Y A+ +I F G ++G C+ CYG TG E VLD++ + VN A G L+ +V R+ +++ L++ Sbjct: 49 FSDVRVSVSIPSWVPAFATPGVPGTTVEILKGIDGEVSSGELLAILGASGSGKTTLLNRLA--MMPLMDGGKFSGSVTVNGLEVTDGFFTRHCAFIHHDDRLWSALTVYENVNFAAKLYCPELSSSQRERRVKRILKATGLESCANTKAGNIFIDGVSTGQRRRLSIAVELMGSPDILFVDEPTHGLDSKSASEIMTVLGSLARDANVAVICSIHKPATRTFMAFDKAL---------------------------------------------------------------ILSKGQTAYFGPTRKATDYFADVGFELPPRTNPADFFLEITNPDFAGKAQVNKIISTWQAQQHAGDVENASTVQTEATASASERPSYASSYPWQMCVVMHRLLLSYSRDPGSYIGRGIMFSSMSIIFGIIFLGLQRNQESVLDYLFSMTFMLANASYMTSIVMHTFKLEVDVLAKEVRNGMYAPVSYAIASSLVQMPFVFFITIMATVPSYWLTGYNDDPARFFQFLGMVFLFLYLCESIGLAFASAVSNLLLAIGSVVSLLSVLFVFNGLFVTPEKVTWALRWIRYVSPHYYVMIALGKISFAGTHWSGYQGCMQACYGETGDE-----VLDAVQG---MTSSVNFAKVIGVLLAEIVVLRIFYWLMLRKQ 639 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.779.1 >prot_Ecto-sp6_S_contig101.779.1 ID=prot_Ecto-sp6_S_contig101.779.1|Name=mRNA_Ecto-sp6_S_contig101.779.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=687bp MASSAVAGEDVEVGSSRVCPAEPLSKLWKSPGDQKVDFRFRDVRFSVEVSback to top mRNA from alignment at Ecto-sp6_S_contig101:70163..81237- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.779.1 ID=mRNA_Ecto-sp6_S_contig101.779.1|Name=mRNA_Ecto-sp6_S_contig101.779.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11075bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:70163..81237- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:70163..81237- >mRNA_Ecto-sp6_S_contig101.779.1 ID=mRNA_Ecto-sp6_S_contig101.779.1|Name=mRNA_Ecto-sp6_S_contig101.779.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2061bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:70163..81237- (Ectocarpus species6 EcLAC_371)back to top |