mRNA_Ecto-sp6_S_contig100.744.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: D7FRM8_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM8_ECTSI) HSP 1 Score: 929 bits (2400), Expect = 0.000e+0 Identity = 474/483 (98.14%), Postives = 476/483 (98.55%), Query Frame = 3 Query: 132 MASASAAAGAGAETTSRREYIMSELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQTGAGRGDDFDAFS 1580 MASASAAAGAGAETTSRREYIMSELQQVRELFPAPMIQAANTSFVQVV MRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGG ETGKAVAALKVV+DAVNKNKFLPCWKELRQAATLVTSLGGGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEI+RRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTR VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQTG GRGDDF AFS Sbjct: 1 MASASAAAGAGAETTSRREYIMSELQQVRELFPAPMIQAANTSFVQVVVMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGG--ETGKAVAALKVVVDAVNKNKFLPCWKELRQAATLVTSLGGGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIVRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTR--VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQTGVGRGDDFGAFS 479
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: A0A7S1UKC2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKC2_9STRA) HSP 1 Score: 321 bits (823), Expect = 1.010e-95 Identity = 187/450 (41.56%), Postives = 255/450 (56.67%), Query Frame = 3 Query: 201 ELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQE---ELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARFQ 1541 EL VRE PA I+A ++ V RT + +I+A+L P+DYP T L L S +LP P LRKL + EAV GE + + L+ + + + N+F CW+E+R+AA LVT GG DE +G+VT+RV+ Y + I++P+ YP G G E+ H FP + + Q E+ +R+C+ G E AL+ SNPI+ P +GG G+ VR+T+EH+R+LKHDV F+KK DLR V + N + S Q+RR+ARR L L K E ++E KK+ ELE +E+ L SD +QPSL +V LV +P E C AC + PE P SL D RP R VFCGH+ H+DCL W+TEPPF + C C R+YHPDWP + K LE+AWAN+QA+ RE+ +V DF VD RFQ Sbjct: 12 ELAAVREWLPAEQIEALRPDYISVHLQRTRHNRIKAKLTPPEDYP--ETHLTLTLESPALPPPLLRKLTH--------------QCEAVVAAAGEGPQVMPVLRHLHNFLCGNRFTTCWREVRRAAQLVTDHGGRVGLDEANGIVTMRVEQRGYGLTLRIEIPEAYPDVGAGFEVVRHTFPEAMMAAYSAQAEDAVRKCVGGQPWEDALRASNPIRGPGRKGGGSDGTPTVRVTNEHMRSLKHDVRFLKKVTDLRQVNARRENRNGTLVA-SAQDRRSARRTLSRLQKKEGAADEAYEKKMQELEAREEAIAAGLSADNHSDDAQPSLSAVVGLLVRKLVLEIPGEECQACGELAFPESPAAASLSDDTAPMRPCR--VFCGHYLHWDCLNRWLTEPPFVRSCTHCNRRIYHPDWPSDYKLLERAWANQQAREREINDVSDFLGVDERFQ 442
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: A0A7S3M8B6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8B6_9STRA) HSP 1 Score: 268 bits (686), Expect = 6.520e-76 Identity = 170/474 (35.86%), Postives = 251/474 (52.95%), Query Frame = 3 Query: 156 GAGAETTSRREYIMSE-LQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNK----NKFLPCWKELRQAATLVTSLGGGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRA--------VFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDFFTVDARF 1538 G AE+ + R M E L +RE + + +V +V +RT Y+++Q + + + YP P LEL+S +LP P L+ K E AR P +S +K + + ++K N F+PCWKE++Q +TL + G ADE+ G+V +++ +Y ++VP YP +G VE + NFP I Q +EI+RRC G + E A+Q SNPIK + + R+T+ ++ +LKHDV +K+ DLR +K AK ERR ARR+L+ LA+ E+ +++E K + E E E ++L+ + S+T+QPSL FLV F RLP E C AC K V+PE P D A TR A FCGHW H+ CL W+T PPF + CP C R++HPDWP++ KQLEKAW +A++RE+ +V DF + +F Sbjct: 28 GCSAESINPRASAMKEDLAFIRECITPAAVITVSKEYVTLVIIRTQYSRVQFHVGYTEAYPFEL--PTLELSSPTLPIPLLQNKQKECLENAR---PLLGQSM---------------MKALYEPIHKFIHTNMFIPCWKEMKQISTLCENKGK-IGADEKEGVVLLKLNCCKYKHTVKLKVPYNYPEDGVKVEFSNSNFPEDIQYMFQSQVDEIVRRCAAGATVEQAMQVSNPIKF--AEIASKSVTPTPRLTTNNLLSLKHDVGVLKQISDLRVATTSGSK--AKYVTQVNAERREARRDLRKLAREESAADQEAQKAILEEEQNEMKDLIKGKASETAQPSLYAAAHFLVEDFACRLPLELCQACKKPVLPELPESEKPPDSAPSTSKTRAARANLKPMRTFCGHWLHFQCLNEWLTTPPFVRMCPVCARRIWHPDWPEDHKQLEKAWQANEARKREMCDVSDFMGMGEKF 476
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: A0A7S4VQJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VQJ9_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.000e-66 Identity = 162/485 (33.40%), Postives = 252/485 (51.96%), Query Frame = 3 Query: 186 EYIMSELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPIL---ELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLV---TSLGGGFRADEES---------GLVTIRVKS-GRYTVVALIQVPDGYPM--------EGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGR-GGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTS----QPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDP----------------RHPSLRDPAHKERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCPR--CGHRVYHPDWPQEPKQLEKAWANRQAKRREV 1499 E + E++++++ FP IQ+A SF+ RTP +I+ L FPD YP + ++ ++ A L + R+L K+A + A G+ + + ++D VN N+F+PCW+EL+Q LV ++ G G + ++S G + +R++S G + I + + YP + C ++++S NFP I Q +E++RR G +P+ AL+ SNPI+ P G G + VR+T E ++ LK D E +K+ DLR V + NA + + +ER+ ARR +K + +E + ++ + +L+E+ L +SD QPSLL LV FL+ RLP+ETC C K V+P +P R R A +RP R FCGHW+HY+CL ++MTEPPF +C CG RVYHPDWP + K+LE+AWANRQA+ RE+ Sbjct: 3 ESVADEIKELQKNFPQVSIQSATDSFLTASYERTPSTRIKITLTFPDGYPTHAAIILVSASDVVPAGLKKKLERELGKTASDLA-----------------GQYNQVNDVFRRLVDFVNTNRFVPCWRELKQCVDLVNNDSTAGNGNKTKKKSSSIAINELEGKIKLRLQSAGEFYYSCSIVIDENYPSTKTHMDYGKPCHLKMESTNFPPKIESMLTTQAQELVRRMQDGMTPDDALKMSNPIRAPKGYLGDESKEPTKVRLTQETLKGLKRDTETLKEVRDLRQVDAESKQGNATIKAHAAKERKNARRAIKKITASEIAKDTSAEEREKQWQLEEKARLAGYNISDFDGSHPQPSLLSLVIFLMEKIQ-RLPEETCPVCTKAVLPTNPKDLKFLYTNASDFKTEREKKARKVARLKRPIR--TFCGHWYHYNCLDIFMTEPPFGAECKAEGCGRRVYHPDWPGDMKELERAWANRQARAREI 467
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: A0A7S4HL96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HL96_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.270e-55 Identity = 151/479 (31.52%), Postives = 232/479 (48.43%), Query Frame = 3 Query: 192 IMSELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFRAD---------------EESGLVTIRVKSGRYTVVALIQVPDGYPMEGCG--------VELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSD----TSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPR------HPSLRDPAHKERPTRRAV--------FCGHWFHYDCLRVWMTEPPFAKDCPR--CGHRVYHPDWPQEPKQLEKAWANRQAKRREV 1499 + E++++R P +I +A +F+ RT +++++A L FP+ YP I+++ + P L+K ++ E + A K G+ A + ++ V+ NKFLPCW+ELRQ LVT GG R E G + + + S RY + + + DGY C E++S NFP I QG+E++RR G + E AL+ SNP+++P G VR+T E V+ LK D E + DLRDV + + +V S +ER+ ARR + + E + EQ +K + +L+E+ + ++ QPSLL LV FLV RLP E C C + +P DP+ S+ KE+ +R+A +CG W+H+ CL +M EPPF +C CG RVYH +WP + K LE+ WA +QAK RE+ Sbjct: 9 VAEEVKELRRHLPKVVISSATENFITATYERTQFSRVKATLTFPEGYPTHPL--IVDVACDDVVPPGLKKKLE--RELGGVASSLAGK-----------GQLCAVFEKLVSFVDTNKFLPCWRELRQCVDLVT--GGTTRVAAGKTNESCCSTVTIIESKGKIKVSLWSERYFYRSSVVIDDGYRSTSCHEDYGKPCRFEMESTNFPPKIESLLTSQGKELVRRMQDGMAAEDALKMSNPVRLPKTFKGNTHEPVKVRLTQEAVKGLKKDTETLSAVRDLRDVNAATKQGDVRVKLHSKKERKDARRMIHKITDREIAKDSEQEEKERQWQLEEKARIAGYNFTEFDGSNPQPSLLTLVKFLVREVH-RLPNEHCPVCSELTLPTDPKDLKALYQSSVDAKTEKEKRSRKAAKQKRPMRTYCGCWYHHRCLDKYMREPPFGAECRTEGCGRRVYHNEWPGDMKVLEREWAAKQAKAREI 469
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: A0A2R5GBD8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBD8_9STRA) HSP 1 Score: 198 bits (503), Expect = 7.600e-51 Identity = 157/463 (33.91%), Postives = 245/463 (52.92%), Query Frame = 3 Query: 180 RREYIMSELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDA-VNKNKFLPCWKELRQAATLVTSLGG-GFRADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKI-----PPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQPSLLP------LVDFLVNVFGWRLPQETCVACDKRVMPEDP-RHPSLRDPAHKERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCPR--C-GHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDF 1517 R I + + ++++ A ++ F ++V +T Y ++ +QF D+YP+ +E+ S +LP KL++ + R A + +G G VAA +D +++NK L E+RQ L + ++E+G + ++ G+Y + A++ VPD YP VE+K +FP + L+Q EI R+C G S E A+Q S + PP KP +V++TS H++++KHDV F+KKA+DL++V NK + STQ RRAARREL+ L K E E+E+A++ AE + E+E+L + T Q L P +V+FL F +RLP+E + DK V P DP + L + K+RPTR CG W+ Y L+++M PPF K CPR C G V HP++ +PK+ E A++ QA +RE+ EV DF Sbjct: 55 REAAIARDREDLKDVIHAHHLKTFTEDFAKLVCHKTAYRRLMLHVQFSDNYPSDPLH--VEVQSDTLPA----KLVEKLQAMFREKLEKPADQDGLGVRGRPH---VAAFYAYVDEMIHENKLLWATPEVRQTLALAKEIPDLTIAVNDEAGTLKLKATCGKYMMRAVVTVPDEYPASPLEVEMKKCSFPPTVHTVFLLQAREIARKCSIGVSVERAVQQSTTVVADRLIAPP---QKPGTKRDVKMTSAHLKDIKHDVNFLKKANDLQEVNASYNK-QLHMYLHSTQVRRAARRELRKLTKQEF--EKERAREEAEAAVAEEEQLREWRRV-TGQEDLGPQRCIRAVVEFLTRGFIFRLPKEKSLVSDKAVFPADPAKAQELINRRRKDRPTR-VPSCGCWWIYSELKIFMETPPFPKPCPRPACNGAIVEHPEFENDPKKRELAYSKSQAVKREMQEVEDF 500
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: B8BWC1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWC1_THAPS) HSP 1 Score: 187 bits (476), Expect = 1.720e-47 Identity = 151/484 (31.20%), Postives = 232/484 (47.93%), Query Frame = 3 Query: 192 IMSELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDA----VNKNKFLPCWKELRQAATLVTSLGGGFRAD---------EESGLVTIRVKSGRYTVVALIQVPDGYPM----EGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNV--RITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPS----TQERRAARRELKTLAKTEAVS-----EEEQAKKLAELELKEQEELLHSQLSDTSQPSLLPLVDFLVN-VFGWRLPQETCVACDKRVMPEDP-----------------RHPSLRDPAHKERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCP--RCGHRVYHPDWPQEPKQLEKAWANRQAKRREV 1499 I +E+++ + +FP+ + + F+ RTPY +I+ L FPD YP+ ++ A +PQ +KL K A + ++VV + V+ N F+PCWKEL++ LV S A E G + + + + Y I + YP + C ++++S NFP I Q +EI+RR G S E AL SNPI++P + ++ RIT+E ++N+KHD E +K+ +LR+ E +K N ++R+ ARR + L + E ++ E+++A KL E +L E ++ S QP L LV FLV+ V G L ETC C +RV+P DP +HP A K++ +CG W+H CL ++TEPPF +CP CG RV+HPDWP + KQLE+ WA R+A++REV Sbjct: 15 ISAEVKEAQSMFPSVNVLTSTPHFLIATYERTPYTRIKMTLTFPDGYPSHPLVVNID-QDALVPQGLKKKLEKELNGLANERAKLTQYDQ---------------VRVVWERLTTFVDTNMFVPCWKELKKCVDLVQSSNTKATAKGKQSTMSIIETKGKIQLSLHNEAYYYKCSILIDPAYPDFSSGKSCNLQIQSTNFPPTIETMLTAQAQEIVRRMQEGLSRERALLMSNPIRLPKNFHLHDDDNNSIKSRITNETIKNIKHDTETLKRVCELRNA-ESASKYNHNAGYQDLKVLAKDRKDARRTINKLTEAERMADLKLEEKQRANKLEEAKLIEGYYDVYEG-SHEPQPCLYVLVKFLVDKVRG--LVGETCPCCTERVLPVDPDELKLMYGSNSHQVNNQKHPK----ATKKKMKPMRCYCGCWYHKSCLNTFLTEPPFGIECPTENCGRRVFHPDWPGDIKQLEREWAAREARKREV 474
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: F0YDK0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDK0_AURAN) HSP 1 Score: 194 bits (492), Expect = 2.670e-46 Identity = 123/328 (37.50%), Postives = 167/328 (50.91%), Query Frame = 3 Query: 537 NKFLPCWKELRQAATLVTSLGGGFR-ADEESGLVTIRVKSGRYTVVALIQVPDGYPMEGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSG-NVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLSDTSQ--------PSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDPRHPSLRDPAHKERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKR 1490 N+F+PCW+ELR+ A L GGG A+ G+ K+G Y V + VP YP G + +++ +F + L Q E++RRC G + A + S+P+ R G G V + H R+LK D++ +KK DLRDVG + K V +ERR A+RELKTLA+ E ++ H+ LS T+ PSL V+ LV+ F RLP+ETC C RV+PEDP P+ A + PTR CGHWFHY CL +T PPFA C C RV+HP WP K L++AW R+ R Sbjct: 769 NRFVPCWRELRRCALLCERRGGGMAGANPAKGVARFAAKTGAYAVEFSVTVPADYPAAGVELAVRASDFSRPLVDVQLAQVRELVRRCAAGADVDAAKRLSDPVAASAARLGAGDDRGPRVTASGAHFRSLKWDMKALKKIADLRDVGAERTKRG--VPAHGREERRGAKRELKTLARFEGA----------------RDAAAHAALSATAAEAAAAPPVPSLFAAVEALVDDFAARLPEETCQCCGARVLPEDPACPA----AAGDEPTR--ALCGHWFHYACLEKALTGPPFALSCGACDRRVWHPAWPDAAK-LKEAWHARERPR 1071
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: A0A7S2K5N5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5N5_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.470e-44 Identity = 134/448 (29.91%), Postives = 208/448 (46.43%), Query Frame = 3 Query: 300 IQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLG---------------GGFRADEESGLVTIRVKSGRYTVVALIQVPDGYPM--------EGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNVRITSEHVRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQERRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEELLHSQLS----DTSQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDP-------RHPSLRDPAHKERPTRRAV--------FCGHWFHYDCLRVWMTEPPFAKDCPRCGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDF 1517 IQA + PD+YP + PI+ + L L+K ++SA T + + + G+ G+ +AA + ++ ++ NKFLPCW+EL+ +V +L +E +G + +++ RY IQ+ D YP + C +++ N P I Q ++++R+ G S + A SNPI+ P A VR+T E +++LK D E +K +LR V NAKV +ER+ ARR +K + +E + +K + ++ E+ L +S QPSL LV FL++ WRLP+E C C V+P +P + S KE CG W+HY CL +M EPPF C C RVYHPDW + LE+ WAN+QA+ RE+ +V+ F Sbjct: 39 IQATITVPDEYP--QSPPIINV---DLKLKGLKKKLESA------MTQESMQLK------GQYGQIIAAFRCLVHFIDTNKFLPCWRELKDCTDMVQNLNEKNQHSSNNXXXXXKSTVSCNELTGKIRLKLCHNRYYYSCSIQIHDAYPSTTTIAEWGKACVLKMVGTNLPPKIENMMSTQAQDLVRKMQDGMSYDDAFNASNPIREPKDFRKHAAKEVTVRLTQEKLKSLKQDTETLKVVGNLRHVDGDSVSWNAKVKAHGAKERKDARRNIKKITDSEIAKDLAAEEKDKQWQIDEKSRLAGYDISAFDGSNPQPSLKALVRFLIDRI-WRLPEEKCPVCTTLVLPANPDELLTLYKSSSSDCKTEKEXXXXXXXXXXXPIRPICGCWYHYSCLDKFMREPPFGASCLSCKARVYHPDWSDNMQTLEREWANKQARLREIEDVKMF 468
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Match: K0SBM5_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBM5_THAOC) HSP 1 Score: 177 bits (450), Expect = 3.690e-44 Identity = 149/486 (30.66%), Postives = 231/486 (47.53%), Query Frame = 3 Query: 192 IMSELQQVRELFPAPMIQAANTSFVQVVAMRTPYAKIQARLQFPDDYPARSTSPILELTSASLPQPFLRKLIKSAEEAARACTPTAAKSEAVGGGGGETGKAVAALKVVMDAVNKNKFLPCWKELRQAATLVTSLGGGFRADEES--------GLVTIRVKSGRYTVVALIQVPDGYPM-------EGCGVELKSHNFPAHIARRHLVQGEEIIRRCLCGYSPELALQTSNPIKIPPGRGGKPAGSGNV----RITSEH-VRNLKHDVEFIKKAHDLRDVGEGKNKPNAKVAPPSTQE----RRAARRELKTLAKTEAVSEEEQAKKLAELELKEQEEL-----LHSQLSDT--SQPSLLPLVDFLVNVFGWRLPQETCVACDKRVMPEDP--------RHPSLRDPAH---KERPTRRAVFCGHWFHYDCLRVWMTEPPFAKDCPR--CGHRVYHPDWPQEPKQLEKAWANRQAKRREVGEVRDF 1517 + E+ + FP ++ A SF+Q R+PY +++ L FPD YP + + +P RKL + A A G T + + + +N+N F+PCW+EL+Q +LV + + ++S G + + + + +Y I V YP + C +++ + NF I Q +EI+RR G S E A+ SNPIK+P K G V R+TS + ++KHD E +K+ +DLR + + +T++ R+ ARR ++ L + E +E+ K + +L+E++ L H T QPSLL LV FLV L E C AC +RV+PE+P +H S R+ + + RP R V+CGHW+H DCL MTEPPF CP CG R+YHPD+ + + LE+ WA +QA+ REV + +F Sbjct: 6 VAEEIADAKRTFPGVLVATATDSFMQCSYERSPYTRVRLTLSFPDGYPDGHQLIVSVVADDIVPVGLKRKLEGDLNQVA-----------ADNKNKGYT-QIEHIFRHLTTFINENMFVPCWRELKQCVSLVKTSNENESSTKQSTISIYERQGKIRLGIVASKYHYNCSITVDPAYPDFSPANSGKACLLKVTATNFSEPIVLVLTSQAQEIVRRMQEGLSREKAVLLSNPIKVP-----KHFHLGAVLDKERVTSNSTILDIKHDTEALKRVNDLRKKEATSVRASGDNGYVNTKQLARDRKNARRAIQKLTEEERKHDEDLNSKERQWQLEEKKRLEGYYDSHIGQGGTIDPQPSLLVLVSFLVQKIKG-LVDERCPACKERVLPENPDDLALMYGKHKSARERSKECKRRRPMR--VYCGHWYHRDCLTTTMTEPPFGLSCPAPGCGKRIYHPDFSGDIQTLEREWAAKQARLREVEDAMNF 471 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.744.1 >prot_Ecto-sp6_S_contig100.744.1 ID=prot_Ecto-sp6_S_contig100.744.1|Name=mRNA_Ecto-sp6_S_contig100.744.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=496bp MAYVDSDNAAEQMASASAAAGAGAETTSRREYIMSELQQVRELFPAPMIQback to top mRNA from alignment at Ecto-sp6_S_contig100:454591..460594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.744.1 ID=mRNA_Ecto-sp6_S_contig100.744.1|Name=mRNA_Ecto-sp6_S_contig100.744.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6004bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:454591..460594+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:454591..460594+ >mRNA_Ecto-sp6_S_contig100.744.1 ID=mRNA_Ecto-sp6_S_contig100.744.1|Name=mRNA_Ecto-sp6_S_contig100.744.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1488bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:454591..460594+ (Ectocarpus species6 EcLAC_371)back to top |