mRNA_Ecto-sp6_S_contig100.741.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A6H5KVC1_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVC1_9PHAE) HSP 1 Score: 664 bits (1714), Expect = 1.400e-236 Identity = 343/356 (96.35%), Postives = 348/356 (97.75%), Query Frame = 1 Query: 31 MFRSGFARCRPRQVSATGGLRLSCRQPQGAWTGSSGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDDQ 1098 MF SGF RCRPRQVSA GGLRLSCRQP GAW G SGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLS +KLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHP+QRASVS+TPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLS+MTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDD+ Sbjct: 1 MFTSGFGRCRPRQVSAPGGLRLSCRQPLGAWMGRSGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSPVSKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPNQRASVSETPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSVMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDDR 356
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A835ZG72_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG72_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.920e-81 Identity = 162/344 (47.09%), Postives = 225/344 (65.41%), Query Frame = 1 Query: 160 STEPAGPE--ISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGP-----SPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDDQ*LYIADDISIGALSAE-GGIDGGR 1167 S +P+G IS R F+ + +D KV+ +LD+ LG E K RK L +G + T +A +TFD PTWAVK+++SA +EEIPP + LPEVA VGRSNVGKSTLLNAL+GLK HP RA+ S PGETR++DFF++GKG +A++++ D PG+GFA+A EE+ + + ++ YLRGRGA LKRV +LLDARHGFK D+ FL LY KG +PLG Y+PPK+Q++LTKCDLV+R +LARRV VR +L +V+ R+T L ++ +SAL+ + +LQKELA L P+ A + R ++ + + + + G A GG +GGR Sbjct: 67 SDDPSGEPATISNRAAFRALPIDNKVLAYLDSRDLGRELPKRASKRKRVLIEKGLHD--LHSVTPESAALKTFDVPTWAVKKVASAQSVEEIPPPS-ELPEVAFVGRSNVGKSTLLNALLGLKGHPLVRAATSMRPGETRSIDFFRLGKGSKAQLLLVDTPGFGFAFAKEEESERFIATLLQYLRGRGALLKRVCMLLDARHGFKANDVAFLQRLYARKGQDGLGRNPLGPYKPPKLQVILTKCDLVQRRELARRVSQVRARLSDVTPRETYLPVLMVSALRDQAVEDLQKELAGLVPQ----ARRSEDRSDTAQSSEKEQSSESREGEGGGYGASAGGREGGR 403
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A7S2GV24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV24_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.600e-46 Identity = 94/197 (47.72%), Postives = 130/197 (65.99%), Query Frame = 1 Query: 454 EVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKG--PSPLGKY---RPPKIQILLTKCDLVKRIDLARRVVFVRQQL-EEVSRRQTNLSIMTLSALKGAGMVELQKELASL 1026 E+ALVGRSNVGKS+LLN ++ + P +A PG T+ L F+ R + + D+PGY FAY ++E+ + W LM+ YLR RG LKRV LLLDARHG K D +FL LLY+P+ P G++ PPK+Q++LTKCDLV R DL RR+ VR+++ +E+ R L + +SA +G G++ELQ+ELASL Sbjct: 40 EIALVGRSNVGKSSLLNTVLNISASPKNKAPTGTRPGVTQKLHFYAAAT--RKPLTLVDVPGYSFAYEDQERIEAWNDLMLKYLRHRGPSLKRVCLLLDARHGLKVIDRQFLRLLYEPRPIVDPPPGEHVLWDPPKLQVILTKCDLVDRFDLVRRIQRVREEMSDELPSRAGRLQAIMVSAREGKGIMELQRELASL 234
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A7S1VXG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG1_9STRA) HSP 1 Score: 168 bits (425), Expect = 7.650e-42 Identity = 116/268 (43.28%), Postives = 152/268 (56.72%), Query Frame = 1 Query: 391 VKQLSSATKLEE-IPPAAASLPEVALVGRSNVGKSTLLNALV--------------------GLKKHPDQRASVSKTPGETRTLDFFQI------------GKGKRAKM--IIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDP------KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEE-VSRRQTNLSIMTLSALKG------------AGMVELQKELASLDP 1032 VK L S+ LEE +P ++ L EVAL GRSNVGKSTLLNAL+ K +A +S PGETR + +Q+ GK + KM ++AD+PGYGFA+A+EE+ ++W LM YL RG LKRV+LL+DARHG K AD EFL L + +G +P P IQI+LTKCDLV + DLARRVV VRQQL + + R ++L +M +SA G G++ELQ+ELA+L P Sbjct: 252 VKLLGSSGSLEEELPKSSKGLSEVALAGRSNVGKSTLLNALLYGNQLGKPQERQYRRGKTPENAKLPKGVKAVMSDKPGETRRITLYQLSSEIIKPPKDEQGKKHKEKMSLLLADLPGYGFAFASEEKYKEWHDLMRHYLLDRGKSLKRVLLLIDARHGMKNADFEFLSSLQESLKSTSKEGATPKNVRELPPIQIVLTKCDLVTQDDLARRVVQVRQQLSDNLLREPSSLPVMLVSAKAGLGYNNIRGGIARGGVLELQRELAALVP 519
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: B7FQ16_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ16_PHATC) HSP 1 Score: 162 bits (411), Expect = 5.150e-41 Identity = 131/361 (36.29%), Postives = 184/361 (50.97%), Query Frame = 1 Query: 148 VRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGM----EKKK-----IERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHP------TWAVKQLSSATKLEEIPPAA-ASLPEVALVGRSNVGKSTLLNALVGLKKHPD--------------------QRASVSKTPGETRTLDFFQIGKGKRAK--------MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAP-LKRVMLLLDARHGFKKADIEFLGLLYDPK----------GPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQ-TNLSIMTLSALKGAG------------MVELQKELASL 1026 R+FS+ ++S R+ FK++AV + ++ +G+G+ KKK IE GR R R G + P AT + R + P + VK + + L++ PA ++PE+ L GRSNVGKSTLLNAL+ KH D +A+ S PGETR + F+Q+ + + + D+PGYGFAYA EE + ++ LM YL RG LKRV+LL+DARHG KKAD++FL L + G PP IQ++LTKCDLV R DLARRV VR QL + R+ + L +M +SA G G ++ELQKE+ +L Sbjct: 8 TRIFSSSVIDAKVSNRRSFKELAVHPSIHNYIQLIGVGIPPRRSKKKSQRIAIEPGR-FRDRRGGRAMN--PEATEDQKRERHWKPPPPFGPKAFPVKVVGNVATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNAQLPP-IQLVLTKCDLVTRADLARRVAQVRSQLSDCFIREPSQLPVMLVSARAGVGYNNVVGDKARGGVLELQKEIVAL 364
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A812TAA1_SYMMI (EngB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TAA1_SYMMI) HSP 1 Score: 154 bits (389), Expect = 1.870e-39 Identity = 93/215 (43.26%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 451 PEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAK---MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFL------------GLLYDPKGPSPL--------GKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKELASL 1026 PEVA++GRSN GKSTL+N+L+G +RA VS PGET+ L F+ + K ++K + I DMPGYGF++ +E++ Q L +Y+R RG LKRV+L++DARHG K+ D L + DP + K+QI+LTKCDLV+R+DLARR+ VR Q+ + + +L +M +SA KG G+VELQKEL+SL Sbjct: 24 PEVAIIGRSNAGKSTLVNSLLGYDSSYTKRAPVSSKPGETQALQFYVLRKQYKSKQPALGIVDMPGYGFSFTSEKEAQRCFTLNSSYIRLRGKNLKRVLLVVDARHGLKRTDFRCLHDLMSNTFRDAGDITTDPSADFDVKFDHSKKSANDATWKLQIILTKCDLVERLDLARRIAAVRDQVR-ANFFEDDLPVMMVSAAKGLGIVELQKELSSL 237
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A7S1ZZ98_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ98_TRICV) HSP 1 Score: 160 bits (404), Expect = 4.000e-39 Identity = 113/278 (40.65%), Postives = 154/278 (55.40%), Query Frame = 1 Query: 391 VKQLSSATKL-EEIPPAAASLPEVALVGRSNVGKSTLLNALV-----------------------GLKKHPDQRASVSKTPGETRTLDFFQIG--------KGKRAK-----MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDP------KGPSPLGK------YRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQ-TNLSIMTLSALKGAG------------MVELQKELASLDPKP 1038 VK L A L +++P +++ LPEVAL GRSNVGKSTLLNAL+ +K ++A VS PGET+ + +Q+ +G+R +++AD+PGYGFAYA+E + W LM YL RG LKR++LL+DARHGFK AD FL L + KG K + P IQI+LTKCDL K+ DLARRVV V++QL + +RQ ++L +M +SA G G M++LQ+ELA+L P P Sbjct: 218 VKVLGKAGSLNDDMPRSSSGLPEVALAGRSNVGKSTLLNALLYGNQPSRDGHSVERMYQRGKTPERMKLPRGEKAKVSDKPGETQDITLYQLSSDMVFLNKEGQRENKSKMSLVLADLPGYGFAYASENKATTWSELMKHYLLRRGESLKRILLLIDARHGFKNADYAFLETLQNALKEGQKKGAHVSSKQQCGLEFDLPPIQIVLTKCDLCKQDDLARRVVQVKEQLSKSLKRQPSSLPVMLVSAKTGVGYNNIRRGKARGGMLQLQRELAALVPFP 495
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A1Z5JKA0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA0_FISSO) HSP 1 Score: 149 bits (375), Expect = 1.070e-36 Identity = 98/289 (33.91%), Postives = 156/289 (53.98%), Query Frame = 1 Query: 157 FSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFD---------HPTWAVKQLSSATKLEE---IPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQ----------------------RASVSKTPGETRTLDFFQIGKGKRA--KMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDP---KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRV 906 F+T+ A + S++QQF+ VD +++++ ++G+G+ ++ R+ + P A P ++ P + +S+ L+E PP PE+AL+GRSNVGKSTLLN L+ ++ ++ +A S PGET+ + F+ + G+ + ++ + D+PGYGFAYA+EE ++ L+ ++L+ R LKR++LL+DARHG KKADI+FL LL D K + K P IQ++LTKCDLV + DLARRV Sbjct: 30 FTTDTAVGK-SQKQQFRDTPVDPSILKYITSVGVGIPPRR----------RKNRRNDNTPDEVSNANNPTSWKVPLPFGPNASPVRVIASVSAVNTLDENMGFPPVHKERPEIALIGRSNVGKSTLLNTLLYANRNENRQQEGGRAGRRSRIQTIELPRGIKAVTSNKPGETKHVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDELIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTLLEDELVYKDSANNKKKTLPPIQVVLTKCDLVHQADLARRV 307
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: K0SSQ4_THAOC (EngB-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSQ4_THAOC) HSP 1 Score: 151 bits (381), Expect = 3.550e-36 Identity = 130/409 (31.78%), Postives = 183/409 (44.74%), Query Frame = 1 Query: 139 STAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIER---GRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWA-----------------------------------------------VKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALV--------------------GLKKHPDQRASVSKTPGETRTLDFFQIG-------------KGKRA------KMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYD-------PKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEE-VSRRQTNLSIMTLSALKG------------AGMVELQKELASLDPKP 1038 S ++ + E G S RQ F+ V ++ H++ +G+G+ K+ R G + G V AK R H +W VK L +A+ L + P L EVA+ GRSNVGKSTLLNAL+ G K +A+ S PGET+ L F+Q+ KR +++ D+PG+G+A A+ +DW LM+ YL R + LKR++LLLDARHGFKK D EFL L D G + + + PP +QI+LTKCDLVK+ DLARRVV V++ L + + R ++L +M +SA G G++ELQ+ELASL P P Sbjct: 54 SGGIKELAQEVVGERQSNRQLFRSTPVIPSILAHIENIGVGIRPKRRRRRKAGSDTNIRNGGGTFDEVEELAYFKAKDRQH-HQSWREKRRDRTPATVSTGTFWMPPPPFSSYLRNSHNSEEAAFPGHKIVRRPVKILGTASSLNDKLPRPRGLNEVAIAGRSNVGKSTLLNALLYGNIDEHLSARKFRRGRVPEGAKIPRGNKAATSVKPGETKKLTFYQLSAEFTPLREDQSDISDKRMTDKADMSLLLVDLPGFGYADASTRATKDWNDLMIHYLLKRRS-LKRILLLLDARHGFKKTDFEFLTSLQDGLGTRIQESGGNKIRRELPP-LQIVLTKCDLVKQADLARRVVAVKRDLSDFLLREPSSLPVMLVSAKPGLGFNNVRGGKPLGGVLELQRELASLVPMP 459
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A1Y1WK35_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WK35_9FUNG) HSP 1 Score: 145 bits (365), Expect = 2.430e-35 Identity = 113/291 (38.83%), Postives = 147/291 (50.52%), Query Frame = 1 Query: 145 AVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKEL 1017 AVRV +E E+S RQ F ++ DAK + LD L LG EK RGR F+ W Q + T LPE+ VGRSNVGKSTL+N L G A VS+ PG T+ ++F+ + DMPGYGFAY EEQ+Q W L+ Y+R R LKRVMLLLDARHG K D EF+ LL D G K Q+++TKCDLV RIDLA+R + V Q+ ++ R ++ +SA G+ +L+KE+ Sbjct: 47 AVRVGKSE----ELSNRQLFSRLQPDAKTLDALDMLQLGTEK----RGR--------------------------FERRKWFPVQRARET-----------LPEIGFVGRSNVGKSTLVNTLCG-----SSAARVSERPGLTQQINFYTADND----FHLVDMPGYGFAYVKEEQKQAWVPLIEKYVRERKR-LKRVMLLLDARHGIKANDQEFMELL-DRTGT---------KYQVVMTKCDLVSRIDLAKRHLLVAQETQKS--RNCIPRVLMVSAKHERGLNDLRKEI 270 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.741.1 >prot_Ecto-sp6_S_contig100.741.1 ID=prot_Ecto-sp6_S_contig100.741.1|Name=mRNA_Ecto-sp6_S_contig100.741.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=357bp MFRSGFARCRPRQVSATGGLRLSCRQPQGAWTGSSGSTAVRVFSTEPAGPback to top mRNA from alignment at Ecto-sp6_S_contig100:438162..444182+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.741.1 ID=mRNA_Ecto-sp6_S_contig100.741.1|Name=mRNA_Ecto-sp6_S_contig100.741.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6021bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:438162..444182+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:438162..444182+ >mRNA_Ecto-sp6_S_contig100.741.1 ID=mRNA_Ecto-sp6_S_contig100.741.1|Name=mRNA_Ecto-sp6_S_contig100.741.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1071bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:438162..444182+ (Ectocarpus species6 EcLAC_371)back to top |